Sflv002610.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- Xbp1
- Assembly
- GCA_003268045.1
- Location
- NW:1399082-1403945[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-14 6.5e-11 41.6 12.5 1 64 52 115 52 116 0.95 2 2 0.01 7.1 6.2 1.7 34 56 99 121 98 122 0.71
Sequence Information
- Coding Sequence
- ATGGCGCCCAACGTCATCCGGTCCAATCAGATGCTGATATTAAATTCGGCCATGTGTTATGTGGAACAGCGACAGGCGATCTCGGATGACGAATACGAGTCGACATCGCCGCGATCGCCGCCGGCCAAAAGGACGTACGTGAAAAACATATCGCCGGAAGAGAAGATATTGCGCAAaaaattacgcAACAGAGAAGCAGCACAGTTATCAAGAGACAAAAAGAAAGCACAATTCAATCTTCTATCTGGAATGGTCCATAATTTGAGAAAAGAGaatttacATTTAAGAGAAGAAATAGAATCATTACGATCTAACCAAGAGAAGTTAATGGCTGAGAATGAAAGATTACAAGAACAACTTGCTACAGACTCATTTGTACCAAAAGAGTCAGTGTCCACAGAATCGTATACAACAGAAGCAAATAACAGAATTTTGATTGATGGACCTGAAGTGTCCCATAGACACCCTCTGCAGAAGGGCAAACAGAATCAAATATCCTGTTTGATGCTATGTTGTCAGATCCTGTTCCTATTACTGACAGTTCCATTCTTCATGGTCTCAAACTTTCAGATGACGACAACATGGATTGGTTTGATAGTAATGTATCAGAACGTTTATCAAAAATCGCTGATGAACTACTTAGCGAAagttTTCTCAACGAATATTGTCTTGATGAAGTGGTGGGGAGCACATCAGAAATCATGGAACCCAgccaaaatattgattttcaccATATAG
- Protein Sequence
- MAPNVIRSNQMLILNSAMCYVEQRQAISDDEYESTSPRSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNLLSGMVHNLRKENLHLREEIESLRSNQEKLMAENERLQEQLATDSFVPKESVSTESYTTEANNRILIDGPEVSHRHPLQKGKQNQISCLMLCCQILFLLLTVPFFMVSNFQMTTTWIGLIVMYQNVYQKSLMNYLAKVFSTNIVLMKWWGAHQKSWNPAKILIFTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -