Sper052061.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- stc
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000248.1:4443898-4450783[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00012 5.6 9.3 6.7 9 19 418 428 416 428 0.90 2 13 0.44 2e+04 -2.0 2.2 5 10 453 458 453 458 0.95 3 13 1.6e-08 0.00072 21.8 14.4 1 19 464 482 464 482 0.97 4 13 1.4e-07 0.0062 18.8 11.4 1 19 522 540 522 540 0.94 5 13 6.8e-06 0.31 13.4 15.0 4 19 587 602 580 602 0.86 6 13 1.3 6e+04 -3.5 2.0 5 10 631 636 631 636 0.93 7 13 0.00048 22 7.5 8.4 1 11 642 652 642 653 0.97 8 13 2 9.1e+04 -4.2 0.7 4 10 657 663 657 663 0.86 9 13 5e-10 2.3e-05 26.6 13.9 1 19 669 687 669 687 0.98 10 13 1.9 8.5e+04 -4.0 1.9 6 10 716 720 715 721 0.52 11 13 0.00086 39 6.6 12.4 9 19 733 743 726 743 0.80 12 13 6.2e-08 0.0028 19.9 19.2 1 18 779 797 779 802 0.89 13 13 0.0019 85 5.6 17.0 1 18 808 826 808 827 0.93
Sequence Information
- Coding Sequence
- ATGCCCGTTTGTTCTAATTCCACTGAATTTAAGGTGTCGTCATCATTTATGTCCCGCTGGGCGCCGCGCCATGGGCAGCCCGTGGATGAAGTAAAGTACGATGAACCTGTGAGCAGCAGTTTAATGATAAACCTCGAGAACTGCTACTCCACTCAGCCCAGCTTTTACGGCCTCGGCCAGGATTTCTCCCCAAACTGCCATGTGTCAAGCTCCAACTATAATCCACAAAGCGACGAAAGCTTCTCTGGTTTCTATGGCATGCCGGCGTGCGGCGTGAGCTTGGCTGCAGTTAATGACGAAAACAGCAACGTGATGGCCTATGAAAGAGGACGAGAAGGTGGTTCGGGCTTGCAATACAGTGACATATCGGAGACTGTCCTCAACTCTAATCTGACTCCTCTGGCTAAAGAATTTACGCCCAGCGCAAGTAGTTCGCAAACAAATACCTTGTATGATGATAGGAGCAGAAGCAAAGGGGCTGTACGGAAGGGAACTTACTGGAATAAGGAAAAGCGACACCGGATTGAAAATAGACAGTACAGTTCCAATTATGAAAATGGTGACAAGTACTCTAAGCACAACAATGAGAACTTTCATGGCAATGTTTCAAGTAGGAGTCGTGACTATTGTCGAGCCAACTATTCAGGCAACATACGCAATAATATTAGGGATTTTAACAAGAGCTCCGAACAAAGTAAAGTGTTGCAAGAAGCAAAGCTGTTTTTAGAACAAAGCAAGAGTGCAGAAGAGAATAAGAGTCGCGATGAAACACAAGAGGAAGTGGATCAGGAATCGAATGCTGTTGTTGCAAGGAATAACAGGAcgtcaaataaaagtaataaagattTCTTCCTAAAAAACAACCCTGGATATTCTGAGCATGTGAGGTACAATGATTTCGATAAGTCTCAGAAGCAGGTTTTTTACGGAAAGAGTAATTATAGTAATCGTAACAGGAATTCTAAAAATGTCTATAGAAAAGATGAATATGACAACAGGAGTAAAGATTATCCAACATATGATAGAGTGGACACAGCATCCCAAAGAGAACGCCTGGAACAACTGGTAGTAAGACGTCTGCTGGAATGCTTGGTCTGCTGTGAGAAATTGCGACACACTGACCAAGTGTGGTCCTGTAAGCAATGCTATCACATCTTGCACTTACAATGCACAAACCCGGAGGACTTCCACACAGCTGCGGAACGGTATGCGCTCGCAAGGGACGGTCCTGTTCCCATACCTGCACCGTTAATATGCCACCCCGGTCCCTGTCCCGACTGCACAGTTATGGTGCCTCGCTCCTGTGGATGTGGAGCCACCAAGCCTACAGTTAAATGTAGCTCTACAGTTCCCATTACGTGCCAAAGAACGTGCAACAAGCAGCTGGAGTGCGGTATCCACAAGTGTAACAAGAAATGTCATCAAGGCGACTGCGGTGAATGTACTGAAGACTTACGGCAGGAGTGCTACTGTGGGAAAGTGGGACGGAAAATAAAATGCTCTGCGGAGGCTCAAGGGATCAGCACATATGAATGTGGTGAGCAGtgtgaaaaattattatccTGTAACAATCACAAGTGTGAGCGATACTGCCATCCTGGTCCCTGTGATTTATGTTCACTGGCCCCAGATCAGATCACGACATGTCCTTGTGGGCAAACCAAATTGCTGAAAAGGCGCCTATCTTGTCTTGACCCAATACCATGCTGTAATAAAATCTGCAACAAAAGGCTCCTATGTGGGCAGCCCAGCAACCCTCACTTATGCAGAGCTCCATGCCATGATGGCCCATGCCCGCCATGTCAGCGCACAACTGTAATAAGGTGCCGCTGTGGCCATATGGACAAAGAGATTCCTTGTGTTAAAGTGACTACAAAGGCGGATGATGCCCGTTGTGAGAAGAAATGCACAAAGAAACGGCTCTGTGGGAAACATAAATGCAATCAGCTGTGCTGCATAGAAGTAGACCATGTCTGCCCACTACTGTGCAATCGCCCCTTAACTTGCGGAAAGCACCGTTGCGAGGAGCCGTGCCACAAGGGGCGTTGCTCGCCTTGCTGGCGAACCAGCTTTGAAGAGCTCTACTGTGAATGTGGCTCCAGTGTCCTTTATCCTCCGGTTGCATGTGGCACCCGCCCTCCTCCCTGTGATCAGCCATGCTCACGGCCACGCCCCTGTGGCCACGAAGTTCTCCATAACTGCCACACGGGCCCCTGTCCACCATGCACGATCTTTACAAAGCGCTGGTGCCATGGCCAGCACGAGCAACGCTTCGTGATCCCATGCCACCAGGAGAACTTCAGCTGTGGCTTACCTTGTGGCCGGACTATGCTCTGTGGCAAGCACAAGTGCACCCAGCCCTGTCATGAAGGTCCTTGTCCCACTTCTTGCACTCAGCCTTGCACAGAACTGCGGGCTGCATGTGGCCACCCTTGCAACCAGCCCTGCCATGAGCCGCCCTGTCCAGAAACATCATGTAAGCAGCAAGTCAAGGTGACATGTCAGTGCGGCTTGCGCAAAAGCAGCCGATTCTGCATGGAGCTGGCAGGGGAGTATCAAAACATCGCCATGGCACAGTTGGCTTCAAAGATAGAGGAGATGCAGCTAGGGCATGCGGTTGATATTAGCGACATCACAAGCGGACAGAAAAAGGGAAACATTAAAACaTTGGAATGTAATGACGAGTGTCGGCTGGTGGAACGTAACCGTCGATTAGCAATAGGCTTGCAGATACGTAATCCAGACTTGTCTTCTAAACTGACTCCACGGTACTCCAGCTTCATGCGTGATTGGGCGAAGAAGGATCCCAAATTTTGCCAGTACGTGCATGATAAGCTGACTGAGCTAGTGCAACTGGCCAAGCAAAGCAAGCAAAAGAGCCGCTCGTTTTCCTTCGAAACGATGAATCGTGACAAGCGCCACTTTGTGCATGAATACTGCGAGCACTTTGGCTGTGACACTGACAAATCCTGGCTCCCTGCGTACAGCTTATTGGAGGTCATTCAGAGAGAGAACGGGCAACGCAAGGTGCCTGGGCCGCAACAGCTTGAGAAAGGATCTGCTTCCAAATCAGAATCTGTGTCTCTAAAACTGCCGGGACGCGCACAAAGACCGCCTACACCTCCTGGTGAATACATAGATTACTTTGACAATCCTCCAGAGTAA
- Protein Sequence
- MPVCSNSTEFKVSSSFMSRWAPRHGQPVDEVKYDEPVSSSLMINLENCYSTQPSFYGLGQDFSPNCHVSSSNYNPQSDESFSGFYGMPACGVSLAAVNDENSNVMAYERGREGGSGLQYSDISETVLNSNLTPLAKEFTPSASSSQTNTLYDDRSRSKGAVRKGTYWNKEKRHRIENRQYSSNYENGDKYSKHNNENFHGNVSSRSRDYCRANYSGNIRNNIRDFNKSSEQSKVLQEAKLFLEQSKSAEENKSRDETQEEVDQESNAVVARNNRTSNKSNKDFFLKNNPGYSEHVRYNDFDKSQKQVFYGKSNYSNRNRNSKNVYRKDEYDNRSKDYPTYDRVDTASQRERLEQLVVRRLLECLVCCEKLRHTDQVWSCKQCYHILHLQCTNPEDFHTAAERYALARDGPVPIPAPLICHPGPCPDCTVMVPRSCGCGATKPTVKCSSTVPITCQRTCNKQLECGIHKCNKKCHQGDCGECTEDLRQECYCGKVGRKIKCSAEAQGISTYECGEQCEKLLSCNNHKCERYCHPGPCDLCSLAPDQITTCPCGQTKLLKRRLSCLDPIPCCNKICNKRLLCGQPSNPHLCRAPCHDGPCPPCQRTTVIRCRCGHMDKEIPCVKVTTKADDARCEKKCTKKRLCGKHKCNQLCCIEVDHVCPLLCNRPLTCGKHRCEEPCHKGRCSPCWRTSFEELYCECGSSVLYPPVACGTRPPPCDQPCSRPRPCGHEVLHNCHTGPCPPCTIFTKRWCHGQHEQRFVIPCHQENFSCGLPCGRTMLCGKHKCTQPCHEGPCPTSCTQPCTELRAACGHPCNQPCHEPPCPETSCKQQVKVTCQCGLRKSSRFCMELAGEYQNIAMAQLASKIEEMQLGHAVDISDITSGQKKGNIKTLECNDECRLVERNRRLAIGLQIRNPDLSSKLTPRYSSFMRDWAKKDPKFCQYVHDKLTELVQLAKQSKQKSRSFSFETMNRDKRHFVHEYCEHFGCDTDKSWLPAYSLLEVIQRENGQRKVPGPQQLEKGSASKSESVSLKLPGRAQRPPTPPGEYIDYFDNPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -