Basic Information

Gene Symbol
Hivep1
Assembly
GCA_036346155.1
Location
JARFIY010000345.1:1422543-1438779[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00026 0.075 15.7 0.8 1 23 250 272 250 272 0.98
2 8 0.0078 2.2 11.1 4.4 1 21 278 298 278 302 0.89
3 8 0.11 32 7.5 0.3 2 20 507 525 506 527 0.92
4 8 5e-06 0.0014 21.2 2.1 1 23 1165 1187 1165 1187 0.99
5 8 5.3e-06 0.0015 21.1 4.8 1 23 1193 1217 1193 1217 0.92
6 8 7.3e-06 0.0021 20.7 1.2 2 23 1740 1761 1739 1761 0.97
7 8 0.0024 0.68 12.7 1.7 1 23 1767 1791 1767 1791 0.91
8 8 0.00096 0.27 14.0 2.7 1 23 1809 1833 1809 1833 0.93

Sequence Information

Coding Sequence
ATGGAAAGGAGCGCCGACAGGTACCTGCACAAGAAGTTCAAGAAGCAGTTGAACATCGAGCGGAGCTGCGTCCAGGATGATTGCGACGGCAGAGAGGCAAAGGCAACGTCGAGTATCCAGATTTCGCGGCCCGCTCGCGGCGATATCGCTCCGGACAGGAACAGTCACAGTAGTAACGATAGTGTGCCAAAAGTTAGTACAAAGGGTAGTAGCGAGAATACTTTTAGCGCGGCCGTGTTAGACTCCTCTGCTTTAGTTAAGTCTTCCATATCAGTGAACGCCGTTGAAGAGAACAGCAGAGACCAGAGTGAGACGATAGCGGAGAAGAGCTGCGCAGCGCAAGCTGAGGAATCTGCGGATCCACAATCTTCTTCTGCGAACAGTTACATATCATATGTAATTTCAAAATCCAGTAGTAGCCAACCAGTAGTAGAATCGTTGACCCCTTACAGAGCCGCTAATTTTGATACGACAAGATTTAATGTTTCTGAACCAAGCACTATCCCTTCTTCAGCTGACAAGTCTTCCATTTTAGACAATGTATATTCTAAACAATACGTAACTTCGAAGTTAGTTAATTTAGATAGATTAGGGGACATATCCTCCTCGGCGAACAGCACTAGCTTAGCGATAGAAAACAGTGAGCATCATCACCACCTCCACCACCACTATCACCAGGAGGAAGGTGAATCGAATCAAACTTCCGTCGAGCTGACGACCACCACGGAGAAGAGCGCGAGCGGCAAGTATATTTGCTCCTATTGCAACCTCGCATGTTCTAAGCCCAGCGTTCTCCAAAAGCACATTCGGGCGCATACCAACGAGCGGCCGTACCCTTGCGTCAGTTGCGGCTTCAGCTTCAAGACGCGCTCTAATTTGTACAAACACTGTAGGTCGCGGACGCATGCCAATAGGGTGATGGGCAACAAAGCGCAGGAAGTGCACAACGATACCGATACGGACAGTCAGAACAATAAAATGGAGTACTCTGAGCAGGGCGGCGGAAGCTCGTCCGAATGTGGCAGTGAGGATGTCGTCGTCACAGCGGTGGTAACAAGGGAAGAAAAGGCCCAGGACGTCAAGACAAAGCCATACAAACCGCGATTTCACACGGCTAAGGCCTTCTTTGACGATAATCAAAAGGATGGGGAAGATCAAAAAGTTCCGGATGCCGTCCAGAATAGACCCTCGAGTTCCGACTTACTATCCCTACACATAAATGAAGTTATCAACAAAAACAATGCCATAGTAAATTCGAACGAGTCGTATATGTTACGAAAGCGTTCCATGGATAGCAACAGCAACAGCAACGTCCACCACACATCAGACGGCAACGAAACTCCTATTATATATCCCCATCATACAACTGACGACGGAACTAGACATCAGAGCGATGAGCCACTGAATTTGACCAACAAGAGCCGCAAGAGGTGTTTGAGTGAAATTGCAGAACCCACGACCATGCATACCAGCCTTATCAAAGAACTGCTCCTGAAGAACCTTTACGCAGATTCCATGCAATGTCCTCACTGTAAAATGATCTTCCAAACTGTAACCGAACTCGAACTGCACAAGCTACGGAGTTGCAAGGGCTATATCAAGTCAGGTGCCAGGTACAGCAGGAGCAGTTCCGTAAATGTCGCTTCCATATTAACTAAGAACAAAAACGCTTTCGATAACATTCCGCACATGCAAAACGCGGTTTTCCCTTTAAAATCACCGGGACCGTTTTTGGGGAAGACGCGTTTGGTGGagagtgacaaaaataaatctttttcgTTTGATGATGGTCTTCCGAATTTCCAGAACAACAATCTCCACAGCCCCAACGAAATATTGCGAACTACGTTGCGTTACTCCATTTCGCCACTGACTATCCAACATGATAAGTTGAAGAAGACTCCGGTGAAGCTTTTTGGTGGAGAAGTGAAGATACATACTTCTGGTGAGACCAAGAGCTTTAAGATCGATGGGAATGACGGTGGCGGGGGCGGCGAGCAGCACTTGAACGAGTACAGGCTGAGCGAGAACCGCGTAGTGAAATCTAGCTTGCAGTCTGGCGGAACTGTTCTGCACAATAAGACCAACTATAACGTGAAACAAGACGCGATACGAACGTCCCCGCCGGACGTGATCCGCGTCTATGATAACACCATTCTATCGCCCAGCATAGACTTGTCCAACTTGGAGAAGACCAAATTCAATTTTGACCGGCAGCAGAACCACGACAACGAAAGCGGTGGGAACAAGGCGAATTCAGACTTGCTGGTCAGACCACCCGCTGACGTCATCGGAAGTTCAAATTTCAACAGTACGACGCCGAGCGCATCATATAAATACACTAGTATTATGGATTTTAGCCAAAATGCTGTCAAGCTACTCGCTCCAAATTTAAAACAGCCGAACTTGACTGTACCTGGAGTTCCCATCCCAAACAAAATCATTCTGCCGCACTCCCCCTCGCTGACATTCGAACTCAAGCAGGACGCGAAAGCTTTTGAGCTGCCTAGTTCAAGCGCCGGCGAACGTTTTCCTCTGCCGAAGGCGCAGGATCAACACTTGGAGAACATTCAGTTTGCCCAGAAGCAAATTATACTCCAGCAAAAAATGGCGGCAGAGCCGCTGCCATCACCATCAAACCTGTGCAATCCAGTCAATTTGCTGGTGAACGGGAAGGTGGTGCGTTACGTTCCCGGAATACCTGGACCTGTAGCAGCCGACGTTCCTTTAGATGTTCCGTACAGGTCCAGCTTCCGATCCCAAAAAGCTGTCTCGAAGCCCATGGAGACGAGCTCTCCAGAGCGATCTGTTCCTTATCACGGTCAAAAGTTCCCAGAGCCCGACTGCGTTATGAAATCTCCCAAGTTTGCTGCGCAACTGGAAGTCAAAACTAGCAGCGAGGCCATGAAATCGCCCGCCCCCAAAGGCGGGGGCACCAAGTCCCCTAACAATGCGGTCACGAGTGCTGGTGACCCACCTAGAAAATTCGCCCGGCCGAACACCCTGGCGCTGAAACCGAGCATCGCCGCTCACAAGCAGCACCACGGCCTCACTCCCACCATGTTCAACCAAATCCTCATCAGCCCCGACACGCCTCGAGTAGCCAAGAAGTACATGCAGCATTTCCTGCACGGAAACTACTTCAGCTACCTGGGGTTGAAAAGCTCCACCAAATCCGTGTACTGTACGCTGAATAAAACGCAGCCTTCATATGTTCCCCACTTCAAGAAGTTGAGCATGTATTCCGAATGGAGGCAGCAGGACACCAAAGCTGACAAGTTATACGTTAGCGGGTATGATTCTAGGCAGCGACAGCAGAAATACGTCACGGCAGGAAAGGCTAATGTAGATTTGGTCGTCCACTCCAGTTATAAGTTCGTGGTTGCTGAAACGGCTTCATCGAAAGAGGATAACCAAAAACCCAACTCCATTCTAGGAGGATACGAGTCAAATGAAGACTACACATATGTACGTGGTAGAGGTAGAGGTCGCTATGTGTGTGACCAGTGCGGGATTCGCTGCAAGAAGCCATCCATGCTAAAAAAACACATCCGGACCCACACTAACGATAGGCCATTTACTTGCAGTCACTGCAACTTTAGTTTTAAAACCAAAGGCAATCTCACTAAACACATGAAGAGCAAAGCGCACACCAAAAATTATGCGGCAAGCAGCAGTTCCAGCAGCTCCTCAACTCAACAGAGCGGAACTCAGAGCTCCGAATCGGATACAGATGATAGTGGCATGGACAGCAGTGATGAGTCAACTAGGCAACAGGAACACGAAGCAGCTTATGGCTTATTATCCTTATCACAAAAACCCTCGCCCAATGTCTCAACCTCACAGTTGGAGGGCTTTTCAACAAGCGGCAGCCCGACATGTCCGTTAGGCGTAGCTTCAGCAGACAGCCCGGCCAGCTTTATGAACACAGAGCAAGTGACTCAAGTGAACAACACCAACTTTGCCAGAAACAAGATCCTGGACCAGCGAGTGACGATAAATTTCGACGCCGCAAAAATCGTGAGCGAGACCTCCACGATTTCCACGGATTCGTCCACGCGGGAAACGCAGAATTTGCTCCAATTTTTGGGGAAGACTAACACCAACAGGCCGCTGACGTATCCATATACGTCGGATGTGGCAGAAGATGCCGAGAAGCCAAAAAGTAAGGAAGGGGCTCATGGTTTAACCAATTACACCAACCACACgcagttattagaaaataaagcgGAACAGCAGTTGAAAGTCGTTCAGAAGCAGCATTCTGAGGTGTTGCCTGTTCCAAAAGTGGTAAATAATAGAAACGTAATTCCAATTACTATTACATATGATCCAAGTTATTTGGAACATTATAAAGTGCAGGAAGAGGTGTCTAAATCGACATCGCCGATGTCTGTATCATCTATAGCAGCAAAAGTACAGGCGCCTATGGTGAAGATTAATGATCGAATTGTGTTGAACAATGTCCCGTATAATAATGTATTACAAAGTGAAATACGGAAACGTAAAATGTTAGAAGCAGAGAGCAGCAGTCCTCCAAAGTTACTTCATCGAATAAACCCTGAGCCAGAAGCCATGGATTTATCTATGCCTGCATTGGAAGAAAAGCCTCCTGCTTCTGAAAATAGAACATTAAGATACAACGGAGTATCTCCacacaaagaaaaagaattaccTATACAGATGGTAGCAACCCGGATTCTACCACATGCAGATACAGTTGTACGGAACGCTCCATACAGAAATACTGGAGATAACATGGATAATATGAAGTTCTACAAAAGGTGTGATGACAATTATAAGCATAATAGTAGTAGTGCTCAGAAGTACAGCCAAGAATGTGATACTGTGATCAATTTGAAAACTACGTCGCATCCTGAAAATCAAAATGCGCCGAACATTGAGAGTGGTGATCATatcaatataaattatgttattcaGGAGACTCGTCCTGCTATAATTACAACATTTACTGAGGTGCCGCAGAGTTTCTCACCTATGGATTACGATAACAGTGCCATGGAAACATTGGCAGATGTTGCAACGAAGCAGGTGAAGCTGGAGAAGAACACATTGGCCAAGAGCGTTGCCTCCGAGTATTTGAAACTAGCAACGAAGAACGAATTCCAAGCCAGTGATGGAGTTCGGGAGCCTGGCAGTTACGCATCGACAACGAAGGAAGTTAATGAACTCATTGTTAAGCCGGAAGAGAACAAGAGCTGCACCATTTGCTCCAAGAACTTCAGCAAACCTTCCCAACTGAGGTTACACATGAACATTCATTACCTAGAAAGACCTTTTCGGTGTGACCCGTGTTCAGTTAGCTTTAGGACTAAAGGGCATTTGCAGAAACACGAGCGCAGTGCTAGTCATCATAATAAGTTATCTTCCTCTCCTCTGTTGTCTTCTTCGGAGCCTCGGCCTTTCAAGTGCTCCGACTGCAACATTGCTTTTAGAATACATGGCCACCTGGCTAAACACCTTCGCTCTAAAATGCACATAATGAAGCTGGAATGCCTAGCGAAGATCCCGTTTGGCCTGTATGCAGAACTCGAACGAGCCAACAGTCTGCTCACGGAGATCAACACCACCGATGGGGACCAATGTTTGGAGAGCCTGAAGGTATTGGCCAGGAAAGTATTCATAAATGATCCGAGCAAGCTAAATCAATTAGAAGCATCATTAAGCAGCACAGATATAAAAGGGCATAGCGGACCTTCTGATTGCCTTCGTCCATCAGAATTCATCCAAAAACTGCAGAGGAAAGTGATGGAAGACCCAGGCAAGGAAATACGAGCTTTAACGCAGAAAATGGGTGTTACAGCTTCCATAATGAATGAAAACATCCCTTACTACTCATACAAGAGGCGTAAAGACCAACTTCTTACAGAAAAGACTCAAGAAAACTGCCTGACAAAAGCAAAGAAACATCCTGTTGAATCAGTATCAAATGCAGAACCTATTCAATATGGAGATAAGAAGcaatag
Protein Sequence
MERSADRYLHKKFKKQLNIERSCVQDDCDGREAKATSSIQISRPARGDIAPDRNSHSSNDSVPKVSTKGSSENTFSAAVLDSSALVKSSISVNAVEENSRDQSETIAEKSCAAQAEESADPQSSSANSYISYVISKSSSSQPVVESLTPYRAANFDTTRFNVSEPSTIPSSADKSSILDNVYSKQYVTSKLVNLDRLGDISSSANSTSLAIENSEHHHHLHHHYHQEEGESNQTSVELTTTTEKSASGKYICSYCNLACSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRTHANRVMGNKAQEVHNDTDTDSQNNKMEYSEQGGGSSSECGSEDVVVTAVVTREEKAQDVKTKPYKPRFHTAKAFFDDNQKDGEDQKVPDAVQNRPSSSDLLSLHINEVINKNNAIVNSNESYMLRKRSMDSNSNSNVHHTSDGNETPIIYPHHTTDDGTRHQSDEPLNLTNKSRKRCLSEIAEPTTMHTSLIKELLLKNLYADSMQCPHCKMIFQTVTELELHKLRSCKGYIKSGARYSRSSSVNVASILTKNKNAFDNIPHMQNAVFPLKSPGPFLGKTRLVESDKNKSFSFDDGLPNFQNNNLHSPNEILRTTLRYSISPLTIQHDKLKKTPVKLFGGEVKIHTSGETKSFKIDGNDGGGGGEQHLNEYRLSENRVVKSSLQSGGTVLHNKTNYNVKQDAIRTSPPDVIRVYDNTILSPSIDLSNLEKTKFNFDRQQNHDNESGGNKANSDLLVRPPADVIGSSNFNSTTPSASYKYTSIMDFSQNAVKLLAPNLKQPNLTVPGVPIPNKIILPHSPSLTFELKQDAKAFELPSSSAGERFPLPKAQDQHLENIQFAQKQIILQQKMAAEPLPSPSNLCNPVNLLVNGKVVRYVPGIPGPVAADVPLDVPYRSSFRSQKAVSKPMETSSPERSVPYHGQKFPEPDCVMKSPKFAAQLEVKTSSEAMKSPAPKGGGTKSPNNAVTSAGDPPRKFARPNTLALKPSIAAHKQHHGLTPTMFNQILISPDTPRVAKKYMQHFLHGNYFSYLGLKSSTKSVYCTLNKTQPSYVPHFKKLSMYSEWRQQDTKADKLYVSGYDSRQRQQKYVTAGKANVDLVVHSSYKFVVAETASSKEDNQKPNSILGGYESNEDYTYVRGRGRGRYVCDQCGIRCKKPSMLKKHIRTHTNDRPFTCSHCNFSFKTKGNLTKHMKSKAHTKNYAASSSSSSSSTQQSGTQSSESDTDDSGMDSSDESTRQQEHEAAYGLLSLSQKPSPNVSTSQLEGFSTSGSPTCPLGVASADSPASFMNTEQVTQVNNTNFARNKILDQRVTINFDAAKIVSETSTISTDSSTRETQNLLQFLGKTNTNRPLTYPYTSDVAEDAEKPKSKEGAHGLTNYTNHTQLLENKAEQQLKVVQKQHSEVLPVPKVVNNRNVIPITITYDPSYLEHYKVQEEVSKSTSPMSVSSIAAKVQAPMVKINDRIVLNNVPYNNVLQSEIRKRKMLEAESSSPPKLLHRINPEPEAMDLSMPALEEKPPASENRTLRYNGVSPHKEKELPIQMVATRILPHADTVVRNAPYRNTGDNMDNMKFYKRCDDNYKHNSSSAQKYSQECDTVINLKTTSHPENQNAPNIESGDHININYVIQETRPAIITTFTEVPQSFSPMDYDNSAMETLADVATKQVKLEKNTLAKSVASEYLKLATKNEFQASDGVREPGSYASTTKEVNELIVKPEENKSCTICSKNFSKPSQLRLHMNIHYLERPFRCDPCSVSFRTKGHLQKHERSASHHNKLSSSPLLSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERANSLLTEINTTDGDQCLESLKVLARKVFINDPSKLNQLEASLSSTDIKGHSGPSDCLRPSEFIQKLQRKVMEDPGKEIRALTQKMGVTASIMNENIPYYSYKRRKDQLLTEKTQENCLTKAKKHPVESVSNAEPIQYGDKKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-