Basic Information

Insect: Sinelater perroti
Gene Symbol: RREB1
Assembly: GCA_036346155.1
Location: JARFIY010000348.1:5533664-5541006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00073 0.21 14.4 1.0 1 23 90 112 90 112 0.96

2 16 0.016 4.6 10.1 1.1 1 23 125 147 125 147 0.98

3 16 2.3e-05 0.0067 19.1 6.2 1 23 153 175 153 175 0.99

4 16 6.4 1.8e+03 2.0 0.1 1 21 256 277 256 280 0.71

5 16 0.0025 0.71 12.7 0.9 2 23 286 308 286 308 0.96

6 16 0.025 7.2 9.5 0.8 1 20 357 376 357 378 0.95

7 16 0.084 24 7.9 0.1 1 23 523 545 523 545 0.96

8 16 9.5e-06 0.0027 20.3 0.8 1 23 554 576 554 576 0.99

9 16 0.00097 0.28 14.0 3.1 1 23 582 605 582 605 0.97

10 16 0.00035 0.099 15.4 1.4 1 23 1004 1027 1004 1027 0.96

11 16 0.0013 0.37 13.6 0.4 2 23 1261 1282 1260 1282 0.97

12 16 0.15 42 7.1 6.3 1 23 1288 1311 1288 1311 0.97

13 16 0.05 14 8.6 1.1 1 20 1339 1359 1339 1360 0.94

14 16 0.33 94 6.0 2.5 1 23 1429 1452 1429 1452 0.94

15 16 0.02 5.6 9.9 0.4 3 23 1500 1520 1498 1520 0.93

16 16 0.0087 2.5 11.0 7.8 1 23 1526 1548 1526 1548 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00073	0.21	14.4	1.0	1	23	90	112	90	112	0.96
2	16	0.016	4.6	10.1	1.1	1	23	125	147	125	147	0.98
3	16	2.3e-05	0.0067	19.1	6.2	1	23	153	175	153	175	0.99
4	16	6.4	1.8e+03	2.0	0.1	1	21	256	277	256	280	0.71
5	16	0.0025	0.71	12.7	0.9	2	23	286	308	286	308	0.96
6	16	0.025	7.2	9.5	0.8	1	20	357	376	357	378	0.95
7	16	0.084	24	7.9	0.1	1	23	523	545	523	545	0.96
8	16	9.5e-06	0.0027	20.3	0.8	1	23	554	576	554	576	0.99
9	16	0.00097	0.28	14.0	3.1	1	23	582	605	582	605	0.97
10	16	0.00035	0.099	15.4	1.4	1	23	1004	1027	1004	1027	0.96
11	16	0.0013	0.37	13.6	0.4	2	23	1261	1282	1260	1282	0.97
12	16	0.15	42	7.1	6.3	1	23	1288	1311	1288	1311	0.97
13	16	0.05	14	8.6	1.1	1	20	1339	1359	1339	1360	0.94
14	16	0.33	94	6.0	2.5	1	23	1429	1452	1429	1452	0.94
15	16	0.02	5.6	9.9	0.4	3	23	1500	1520	1498	1520	0.93
16	16	0.0087	2.5	11.0	7.8	1	23	1526	1548	1526	1548	0.98

Sequence Information

Coding Sequence: ATGCAAGGCATTGTGTACATGCCTGATGGTCATCTTCAGACTGGTTCGCCGCCGCCCAGCAGGAGCACCGTTCTTAACTCGAATATGGATTTATCGTCGGAAGTAGATCTGCACGCCAAAGAAGCCATCGTGAACCAAACCAACCAAAGCGACTCAGGTATCCTGTCGGCCACCGGCAACTCCACGCTGGGGGACATGGACCGCTCCAACCGTTCCGAAACCGAAGAAACCGACAATCGCAGCACTTGCAGCTCCCCGGACCGCAAATACCTCTGCCCCATCTGCGAAACCATGCTCACGTCCCAGCACGAGTTCACGCTGCACATCCGATCCCACAACAATGAGTCTGAGGCGCAGGACCCGGAGAAGGGGTTCTCGTGCCGCATCTGCTGCAAAGTGTTGAGCTCCAGCGCCAGCTTGGACCGCCATATGCTTATCCACAGCGGCGAGAGGCCCTTCACGTGCAAACACTGCGGGGACACTTTTACCACCAACGGCAATATGCACCGGCATATGCGCACCCACACCACCAAGACGGAGAACTATGAATCCGATGGAAGCTCTGATAGTGGTGCAAGTAGCAGCTCCAAGACGGTGGAgtacaacaacaataaaataacgtCGAAAACTGacagcaataataaaagtgcTTTTCTCATGGAACATAAAATTGACGGCAAGCGAAAGTACCCCACGGAGGAATCCTTTAAGCAATCTCGCATGAAACTGGAGAACTCTTACGATTCCAATTTGCAAGACCAAAGATACACTTGTCCCGTTTGCGAAAGGGATGACTTCAACTCTATTGATACACTAGAAGTGCATTTGGAAGACAATCACCCCGAGTATCCCGCAAAATGCAATTACTGCAGCCAAATTTTTAACGATAATAAACTTCTGAACGAGCATAAGAGCATGGTTCATACCAACGAAGAAATTAAGTTGCAAAAGAATTCTGTGATTGGCTTTAAAGACTTGACATTTGTAGACTTTTCTAGCCAGAAGTTTCCATATATAGCCAGATACGAATGCGAAAAAAACCTACATAAAGTTGCTGGAGGATTAAAGTTTCAGTGCGAAAAGTGTTCTCGCGCATTTCCTTGCTCCAGCTCTCTTGAAATTCACCAATCAGATTGTACGATTGGTTTAGatttatctattaaaaacaaaaactgcttCAATGTTAGTAAAACTAGTGGCAGCGTTGAAAAGGATATCAGAAGAAATGATTTCTTTGCTCGACTGGATTTGCAAAATAATTCCCAGGAGAAGGTCGAGTCTCTGCACCAAAGTATTAACGACAAGGTACTTAAACTGCAAAAACAGCAACATTTACCCCCATTGCACTCCACAGACAACAAGGACTTGGCTGATATTCAGTCAATAATATCTATGACGACAAACGGAACACTGCTTCAACAGTTACAAGCTAAAACAATGGATATGAATTCAAGCTTGCGTCCCATTTGCAACGAGAACGATGCAGATAttcaaaaacatgaaaatgaagaagaatctCAGGATCTATTCGCCGCAGAATTTCGTAAAATGAAACTGAGGGGCGAATTTCCTTGCCGTCTTTGTACAGCTGTATTTCCAAATTTACGAGCATTGAAAGGACATAATCGCGCACATTTGAATGGCAATAATAACGGAACCTACAGATGCAACATGTGCCCGCATTCATCTATAGACAAAGCAGCTCTTATACGACATATGAGAACCCACAACGGCGATCGACCTTATGAATGTTCTTTATGTAATTATGCGTTTACCACAAAGGCAAACTGTGAAAGACATCTGCGAAATAGACACGCCAAGAATACCAGAGAAGAAGtgaaaaaatctataatttaccATCCTTCTGAAGATCCTAGTAATGAAGAGATTAGCAAGATGTTGGCGAGAGAAGATAGCAATAAGGGCACGTCATTGATAAATGTGCCTAAAGACGCAAACGAAATAATGcaagagaaactaaaaataattacatcgGAAAATTATCTACCAACACCTGACCTTGCGAATCTCCTTCCAGATAAAAGCGATAGAGATAACATTTCAGTGGGATCTaatctattaaatataaaggCTAGCCCTACATTTAACCTTTCTCGGCAGCACTCCGGAAATAGAATAGACATTAATAATATCATTCAGAACGAAAATCTAAAATCGTTGCAAGAACACAGCTTGATCAAAAGCGAGCGGTTGTCTCCGTATAAGCCCGCTTTCAATTTCTCCCCGAAAATTGCCAATGCTTCTACGCCACAAAAAACGTTTCCTAAAATTAATGTGAAAAATTTAGAATCACTTCAAGCTGAAGATAAACAGTTTCCGCAACGAGAATATACCGAAGAGCAACCTATGGATTTAGTTTTGGATCTTAGTAAGAAGAAAGTGGAGGTTAAAACAGAGGAGGCTCCGAAACCAAAAACTGAAGACGCGCCCCAGGACTTAACTAAGAAGAACCCTTTAGAAACGGATCCATCTAACATGAGTGAAATTTTGGCTAGACAATTACTTAAAAACACCCCCAAAATAGATCCGGCTGGTTTATATGCTTCGCAATTGGCTTTTTACAGAAACGGCTTTCCAGCATTGCACGGCCTGTCCACTTGGCCCTTCTCTCTTAATCCTCTGCTATTCCAAGCTATTCCTTCTCCTTTGTTACCGCAAGATCCGCAAGAAATTAAGGAAAGATTGCAAAGGTTGCAGCTATGTGGGGGAGGAATGGTGATGGATAATTTTGCCGAGAGGCTTAAAAATTTCCACCAGCAGCAGAACATTTCGAATGCTAACTTAAATCCATTTAATAACTTCAAGTTAAATGATATGAAACCAGATTTAAAGGCTAACGATGCTTCCTTTTCCAATCATAATGCAAATAATTCCTCTCCCATCACAAAAACTGAGCCTATGGCTTCTCCGAACTCCGTAAAGATGGTAATCAAGAACGGAGTCCTGAtgccaaaacaaaaacaaaggcgTTACCGCACCGAGAGGCCATTCTCCTGTGAGTATTGCTCAGCCAGATTTACCTTGAGGTCGAACATGGAGCGCCATATTAAACAGCAACATCCTCAGTTTTGGTCGCAAAGACAGCGGTCGAACGTTGGTGGTGGGAGCCGCAAAATACAGCCGAGCAGCAATGTAAATAACGCTCGCGcaaattattgcaatataaaTATACCTAATTATGATACTACAAAGAAACATGATTTTGACGATACCAAAGATAATCAAATTTCGGATAAGATTAAATATGTAATTCTAGCGCAACACTTGAAGGCTGCccaaaattataaagtaaacaaCAATCTAGAAAAGACTAAGGAGGAGGATGACGATTACCCTTTGGTGATAGACGAAAAAGATGAGGGAGCTGTCAAGCATGAAGAGCAGAACGAAAGCGttgacataataaataaaaatgaaaatactgtCAAGTCGCAAATTTTGGAAGAGAAACTAAAGCAATATACAGCAGAAGCTGTCCAGTGCTCAAATAATTCTATTCGAAGTGAAGACGGCCAAGACTTAGTTCCGGTTTCTCGTTTATTAGATAATGCATCTCAACAGCCATTTAAGGAGTACTTCAGAAGAACCGAAGGACGTGGGGGTGGAATTAGCGAGGAAGACGAAGAAGGTTTAGTTGCATGTAGCAGTACCAGCGAAGAGAATAACTCTGGGACAGACGAAAATCGGTCAGAATCCGAGACAACAAATCAAACGCCAATGAAGAAAAAATCTGCGTATTCTTTGGCTCCTAATCGAGTGAGTTGCCCCTACTGTCAGCGAAAATTTCCGTGGACTTCTTCCCTGCGAAGGCACGTGTTGACGCACACGGGACAGAAGCCGTTTAAGTGTAGCCACTGTCCCCTGCTCTTTACAACGAAGTCAAATTGTGACCGGCACTTGCTGCGAAAGCACGGAAACTCTGCTACTGCTATCAATAACGAAATGTCTAACAACAGCAATAGTTACATGATGCGAAACGTTCCGGAGAGACCATTTAAGTGCTCCAGTTGTCCCAGCAGTACGTTTTCTACCTATTCAAACTTGAAGAAACACATCAGCTGCAAGCATTCTTGTCAAGGAGCTCAAAGCGACGATGCCCACTCTCAAGTGTCAACGGGATACGAAGCTGGAAGTTCCGAGGACGAGAAAATGTCGCAGGGAGAACATAAAAGCGACTGGGATAAGCAGATCACCTTGCACAATAAAGCGGCGTCCAATGCTGATGTTCAAAACAATTCTCACTTACAGAACTCCGATCTGCCTTTCAAGTGCCATCTTTGCGATAACTCGTTTGGAGAGAGACATGACGCTCTTGATCACATCAAAGATAAACACTACTCTGAATATGAATTGCTTATGTCTAAGAATGCTTTCGACGCTAACGCAACTACTCCAGATGAAAATCCCAACCACGATGATAATGATGAGAATGAAGTGCGAGGAAAATTCCCCGATTATGCAAATAGGAAGGTTATTTGTGCCTTTTGCATGCGTCGGTTTTGGTCTGCGGAAGACCTACGGAGGCATATGCGTACCCACACCGGAGAGAGGCCCTTCAGCTGTGACATTTGCCATCGACGTTTTACTTTAAAGCACAGCATGCTCAGACACCGCAAAAAGCACAACGTGACTTTCGAGAGTGATAATTTAAACAGCGACGAGGACATAAATCACTCGGCTAATATGACTCCATCTTTCGACAAGTTCGTTAAAAGCAACAACAACAATTTGGTAAGTAAAACCAACGACAAGACGGACGAATCCGATGGCACCGAAGGAAGTGACTTGATCAGCAACCTGCTGGGCATTCGAGATCGTTCCATCATCGATCAGGTACTGACCGCTTCTGCCGACGATGCTGCCAAGTTGCTCGGAGTAAAAGACGGCGGCGAATAG
Protein Sequence: MQGIVYMPDGHLQTGSPPPSRSTVLNSNMDLSSEVDLHAKEAIVNQTNQSDSGILSATGNSTLGDMDRSNRSETEETDNRSTCSSPDRKYLCPICETMLTSQHEFTLHIRSHNNESEAQDPEKGFSCRICCKVLSSSASLDRHMLIHSGERPFTCKHCGDTFTTNGNMHRHMRTHTTKTENYESDGSSDSGASSSSKTVEYNNNKITSKTDSNNKSAFLMEHKIDGKRKYPTEESFKQSRMKLENSYDSNLQDQRYTCPVCERDDFNSIDTLEVHLEDNHPEYPAKCNYCSQIFNDNKLLNEHKSMVHTNEEIKLQKNSVIGFKDLTFVDFSSQKFPYIARYECEKNLHKVAGGLKFQCEKCSRAFPCSSSLEIHQSDCTIGLDLSIKNKNCFNVSKTSGSVEKDIRRNDFFARLDLQNNSQEKVESLHQSINDKVLKLQKQQHLPPLHSTDNKDLADIQSIISMTTNGTLLQQLQAKTMDMNSSLRPICNENDADIQKHENEEESQDLFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKNTREEVKKSIIYHPSEDPSNEEISKMLAREDSNKGTSLINVPKDANEIMQEKLKIITSENYLPTPDLANLLPDKSDRDNISVGSNLLNIKASPTFNLSRQHSGNRIDINNIIQNENLKSLQEHSLIKSERLSPYKPAFNFSPKIANASTPQKTFPKINVKNLESLQAEDKQFPQREYTEEQPMDLVLDLSKKKVEVKTEEAPKPKTEDAPQDLTKKNPLETDPSNMSEILARQLLKNTPKIDPAGLYASQLAFYRNGFPALHGLSTWPFSLNPLLFQAIPSPLLPQDPQEIKERLQRLQLCGGGMVMDNFAERLKNFHQQQNISNANLNPFNNFKLNDMKPDLKANDASFSNHNANNSSPITKTEPMASPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEYCSARFTLRSNMERHIKQQHPQFWSQRQRSNVGGGSRKIQPSSNVNNARANYCNINIPNYDTTKKHDFDDTKDNQISDKIKYVILAQHLKAAQNYKVNNNLEKTKEEDDDYPLVIDEKDEGAVKHEEQNESVDIINKNENTVKSQILEEKLKQYTAEAVQCSNNSIRSEDGQDLVPVSRLLDNASQQPFKEYFRRTEGRGGGISEEDEEGLVACSSTSEENNSGTDENRSESETTNQTPMKKKSAYSLAPNRVSCPYCQRKFPWTSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATAINNEMSNNSNSYMMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSCQGAQSDDAHSQVSTGYEAGSSEDEKMSQGEHKSDWDKQITLHNKAASNADVQNNSHLQNSDLPFKCHLCDNSFGERHDALDHIKDKHYSEYELLMSKNAFDANATTPDENPNHDDNDENEVRGKFPDYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICHRRFTLKHSMLRHRKKHNVTFESDNLNSDEDINHSANMTPSFDKFVKSNNNNLVSKTNDKTDESDGTEGSDLISNLLGIRDRSIIDQVLTASADDAAKLLGVKDGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -