Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000132.1:14140923-14144392[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00017 0.049 16.3 3.2 2 23 2 24 1 24 0.97

2 11 0.0009 0.26 14.1 5.6 1 23 99 121 99 121 0.96

3 11 8.9e-06 0.0026 20.4 1.7 1 23 127 150 127 150 0.95

4 11 6.1e-07 0.00018 24.0 0.9 1 23 155 177 155 177 0.98

5 11 9.2e-07 0.00026 23.5 1.9 2 23 187 208 186 208 0.97

6 11 4.7e-08 1.4e-05 27.5 1.4 1 23 215 237 215 237 0.97

7 11 1.5e-05 0.0043 19.7 1.6 3 23 249 269 247 269 0.92

8 11 0.0002 0.058 16.1 5.2 1 23 275 297 275 297 0.99

9 11 6.2e-06 0.0018 20.9 1.8 1 23 303 325 303 325 0.96

10 11 1.1e-07 3.2e-05 26.3 0.3 1 23 331 353 331 353 0.99

11 11 0.00024 0.069 15.9 0.1 1 23 359 383 359 383 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00017	0.049	16.3	3.2	2	23	2	24	1	24	0.97
2	11	0.0009	0.26	14.1	5.6	1	23	99	121	99	121	0.96
3	11	8.9e-06	0.0026	20.4	1.7	1	23	127	150	127	150	0.95
4	11	6.1e-07	0.00018	24.0	0.9	1	23	155	177	155	177	0.98
5	11	9.2e-07	0.00026	23.5	1.9	2	23	187	208	186	208	0.97
6	11	4.7e-08	1.4e-05	27.5	1.4	1	23	215	237	215	237	0.97
7	11	1.5e-05	0.0043	19.7	1.6	3	23	249	269	247	269	0.92
8	11	0.0002	0.058	16.1	5.2	1	23	275	297	275	297	0.99
9	11	6.2e-06	0.0018	20.9	1.8	1	23	303	325	303	325	0.96
10	11	1.1e-07	3.2e-05	26.3	0.3	1	23	331	353	331	353	0.99
11	11	0.00024	0.069	15.9	0.1	1	23	359	383	359	383	0.92

Sequence Information

Coding Sequence: ATGGAATGCGAATTTTGTGATCGGAAGTTCAAGTACCGAAAAAGCTTTATACACCACATACAAACAGAGCATGGGATGTCTGACGAAAGTGATGTGCCTCTCAGCACCTATATTGTAAAATCGGAGGCCGCAAAATGCAGTGCCATTGATAGTTCATTGGACTCTGCAAGCACAACATGTAGGAGTTCCTTAGACATAAGCAACATCAAAGAGCCTGCACATTCAGAAAACTCGGATGAGGGCGATGGTTTCGAAGATTCAGACTTGCTGACGCCCTTGGAAAGCAGGAAACTGCACAGTTGTCATGTGTGTGAATCCAAGTTCGCCCGCGCTAATCACTTGACAAGGCATATGACCCTGCATCGAGCTGTACTTACCCATAAGTGTGACCGCTGTGACAAGGCATTTGCCACACCTGAACATCTAGCAAAACACACCCAGGAGGACCACATTGACAAACCGTACGTTTGTACGATGTGTGACAAACCGTTTAGTCGTGGTGAACACCTTATTCGTCACCTTAAAGTTCACAACACCAATGGGCCCAATGACAACCTGAAATGTTCTATCTGCGAAAAGATTTTTACtagATCTGATCATTTAGCTAGACACACTAAAGTTCATTTACAGCAAGATAAACGTCACGTGTGTTCCGAATGTGGTAAAGCTTTCAATCGGTTGGACAACCTAAAAACTCATCAGCGTATCCATACAGGGCTAAAAGATAACTCCAGGCTACATCTTTGCATTTATTGCGGCAAAGAGTTTAATAATTCAAGTAATATGattGTACATATGAGGAGACATACAGGCGAAAGACCTTACAAGTGCAGTATCTGCAACAAAGGCTTCCCAAGATCGCACGACCTAAAATGTCACGAACGCACTCATTCAGGAGAAAGACCCTACTTGTGTACATTATGTGGAAAATCTTTTAATAAGAGCAACAAATTgTTACGACACACAAGAGTTCACACAGGAGAAAGGCCATACGTATGCAACTTGTGTGGAAGAGCATTTACCCAGTCCAATGATCTTGCTTTACATATGCGAAGGCACACTGGCTCTCGACCCTATGCTTGTGGAGTCTGCTCAGCTAGATTTATACAATCAGGACAACTGAAAGCTCATAGACGATCTACAGGACACTGGATGGAGACGCAGCCAGATCTCAAAGGTGGTCATAGGGTAGAACCAGTGACGCCTATTACCAATCCTACGCCTATTAAGTTTAAAACCCATGGGAAATTTGCGTTTAAATCGAAAGAAGAGGACGTTATCGAAGATGTGAAAGAGCCACGGATTCTCAGCCAATCTGTAGGTATACTTGGAAATATTATCCAGGGTGAAACACATATTCATGCTCAGCCCATAATAATCGAAAGCACAAAGCTGTTGCACCAGTTTCAAAATGTTGGCTTTGTTGGCTTAACCTCAGTTATTAGTGCAACTTCGCATGATGAAAGTgagaacaaattcaaaacagAGGTTCAAAACTACATTGCAAATGTTGGACGGGAAGGAACTCCTATGAGTGTCAGTAAAATAGAGTCTTCTAATGGAAGTGAAGTGACGTTTGCAACTGTGAATTCTTCCACCACTTTTACCAGCCCTGAAAGgtacaattatcaaaattacGGTTGA
Protein Sequence: MECEFCDRKFKYRKSFIHHIQTEHGMSDESDVPLSTYIVKSEAAKCSAIDSSLDSASTTCRSSLDISNIKEPAHSENSDEGDGFEDSDLLTPLESRKLHSCHVCESKFARANHLTRHMTLHRAVLTHKCDRCDKAFATPEHLAKHTQEDHIDKPYVCTMCDKPFSRGEHLIRHLKVHNTNGPNDNLKCSICEKIFTRSDHLARHTKVHLQQDKRHVCSECGKAFNRLDNLKTHQRIHTGLKDNSRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCSICNKGFPRSHDLKCHERTHSGERPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCNLCGRAFTQSNDLALHMRRHTGSRPYACGVCSARFIQSGQLKAHRRSTGHWMETQPDLKGGHRVEPVTPITNPTPIKFKTHGKFAFKSKEEDVIEDVKEPRILSQSVGILGNIIQGETHIHAQPIIIESTKLLHQFQNVGFVGLTSVISATSHDESENKFKTEVQNYIANVGREGTPMSVSKIESSNGSEVTFATVNSSTTFTSPERYNYQNYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00838820;
90% Identity: -
80% Identity: -