Basic Information

Insect: Sinelater perroti
Gene Symbol: -
Assembly: GCA_036346155.1
Location: JARFIY010000110.1:14407921-14410410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.001 0.29 13.9 1.2 1 23 161 183 161 183 0.95

2 16 6.8e-05 0.019 17.6 3.8 1 23 188 210 188 210 0.98

3 16 0.00012 0.035 16.8 0.6 1 23 223 246 223 246 0.96

4 16 0.00032 0.091 15.5 0.1 2 23 267 288 266 288 0.96

5 16 0.16 46 7.0 6.9 1 23 294 316 294 316 0.82

6 16 3.4e-06 0.00098 21.7 4.7 1 23 324 346 324 346 0.98

7 16 1.3e-07 3.8e-05 26.1 2.0 1 23 351 373 351 373 0.98

8 16 0.0016 0.45 13.3 3.6 1 23 379 401 379 401 0.97

9 16 7e-07 0.0002 23.8 0.4 1 23 407 429 407 429 0.98

10 16 0.00065 0.19 14.5 4.2 1 23 435 457 435 457 0.97

11 16 4.4e-07 0.00013 24.5 2.2 3 23 465 485 463 485 0.96

12 16 2e-07 5.9e-05 25.5 0.1 2 23 491 512 490 512 0.97

13 16 1.8e-05 0.005 19.4 1.3 1 23 518 540 518 540 0.97

14 16 3.6e-05 0.01 18.5 0.2 1 23 546 568 546 568 0.98

15 16 7.9e-09 2.3e-06 30.0 0.5 1 23 574 596 574 596 0.99

16 16 0.00044 0.13 15.0 0.1 1 20 602 621 602 623 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.001	0.29	13.9	1.2	1	23	161	183	161	183	0.95
2	16	6.8e-05	0.019	17.6	3.8	1	23	188	210	188	210	0.98
3	16	0.00012	0.035	16.8	0.6	1	23	223	246	223	246	0.96
4	16	0.00032	0.091	15.5	0.1	2	23	267	288	266	288	0.96
5	16	0.16	46	7.0	6.9	1	23	294	316	294	316	0.82
6	16	3.4e-06	0.00098	21.7	4.7	1	23	324	346	324	346	0.98
7	16	1.3e-07	3.8e-05	26.1	2.0	1	23	351	373	351	373	0.98
8	16	0.0016	0.45	13.3	3.6	1	23	379	401	379	401	0.97
9	16	7e-07	0.0002	23.8	0.4	1	23	407	429	407	429	0.98
10	16	0.00065	0.19	14.5	4.2	1	23	435	457	435	457	0.97
11	16	4.4e-07	0.00013	24.5	2.2	3	23	465	485	463	485	0.96
12	16	2e-07	5.9e-05	25.5	0.1	2	23	491	512	490	512	0.97
13	16	1.8e-05	0.005	19.4	1.3	1	23	518	540	518	540	0.97
14	16	3.6e-05	0.01	18.5	0.2	1	23	546	568	546	568	0.98
15	16	7.9e-09	2.3e-06	30.0	0.5	1	23	574	596	574	596	0.99
16	16	0.00044	0.13	15.0	0.1	1	20	602	621	602	623	0.93

Sequence Information

Coding Sequence: ATGAACGACTTCAACTTCTCCGCAGTCGACCTGAGCAAAATGTGCCGAGTGTGCATGAACTCGCTGAACGGCAGCTACGTCCCTATTTTCAGCACAGCCATCGCTAACGGCTCGGTCGTGCTGGCGGCCAAAATAATGTCGTTCACGTCCCTGCAGGTGGTTTATGGGGACGGGCTGCCTCCTTCCGTCTGCTCGAGCTGTTCGCAGCAGATAGAGAACGCGTACTTGCTGAAGCTGCAGTGCGAGGAGTCTGACGTGACGCTGCGGCGATACCTGAATCCCGAGCCCGCTATTTCAGCCACAAATATAGACCTAGTCAATAAGTCTGCGTTGATGCCGGCGAACAGCTTAGATCATGATTTTGATTCTGTCTTTCCTAGTCACACTTCCGACTCCGACTTGTTCTCGGAGCGACCACAATCTAATACTATTAAAGCAAGCATCGCAGAAACGAAACCCAACAAAACAAACACCAAAATATTTGAGTGCATAGAATGTAAGAGCACGTTTGCTAAACAGAATCAGCTGCGGCTCCATATGCGGAGCCATAAAAAAAAGAGTCACACGTGCAAGACGTGTGCAGAAACATTTACTACCGCCCAACAGTTGCAGCAGCATAAAAGAACACATGAAAACGTTAAGAAGAACAATGATAAAGAGACTGTTCACATCTGTACAGTATGCGATGCCAAATACCAAAATAACGATAATTTAATACAGCACATGTTACGAGAACACACGGAAAAAGAGGTGCAGAGCGATgataataaagaagagaaaatcttCAACGAGCGCCTCATATGCAATGTGTGCAACAAGTCATACCTAAAAGCTAGCAACTTAGCAGCCCACATGGGCACGCACACGGGAGTGAAGCCATTCGAGTGCCATATATGTGGCAAAAGGTTTACACAGGGACGTGCACATGCTTGCCACATGCGCACGCATTCCGATGCTATGGATAAGCCGCACAGATGCCATGTCTGCAATAAGGAGTTTGAGCAAGAGAGTCAGCTTACTGTGCATATGAAAAAACATTCGGGGAGGAGTTTTGTGTGCAACGTTTGCGGCAGAAGCTACTGCAACTCGGGAAATTTGAAATCGCACATGCGGCTGCACACGGGTGACAAGCCGTACGCTTGTCATATATGTGGGAGGAGGTTTGCACAAAGCAATGCTCATTCCTATCATATGAAAACACATTCAGGCGAGCGACCGTTTTCCTGTGACATGTGCCCGAAAGCCTTCACGACAAACGGTCAGCTGATCAACCACCGCCGCCTACACACGGGCGAGAAGCCGTTTGCGTGCACTATTTGCCACAAGCGGTTCACCCAGAAAGTCGCGCACACCATTCATATGATGACGCACACGGGCAACAAACCACACCTGTGCAGTATCTGCGGCAAGAAGTACTCGCAGAACAGCCAGCTGATGGAGCACATGCGCTCACACACAGGCGAAACTCTGCAGTGCTCTGTGTGCGGCAAGGGCTACTCCACAGCTGGGAACCTCGCTGCCCACATGAAGACGCACACCGGCATCAAATCTCACATCTGCAGTGTATGCAATAAGGGATTTTATGTTGCTAACAAGTTAGCAAAGCATATGAGGACGCATACGGGAGAGAGGCCGTACGCATGCTCCGTTTGCCCGAAGCGGTTCACCAGCTCGGATGTGATGAAAGTGCACGTGCGCATCCACACAGGTGAAAGGCCGTATCGGTGTGAAGTTTGTGGCAGGGGTTTTACCAATAATTCGCAGCTAACCGTTCACATGCGCTCACATACTGGCCAAAGGCCATATGTTTGCAACATTTGCTTTCAAGGTTTCACCACATCAGCCAGTTTAACAGTACATTCAAACTCGTGCAGCAACGGAATTAGACGTGTATCAGACACTGCGGTGTATTCTAATGGCACTATGAGTTACAAATAG
Protein Sequence: MNDFNFSAVDLSKMCRVCMNSLNGSYVPIFSTAIANGSVVLAAKIMSFTSLQVVYGDGLPPSVCSSCSQQIENAYLLKLQCEESDVTLRRYLNPEPAISATNIDLVNKSALMPANSLDHDFDSVFPSHTSDSDLFSERPQSNTIKASIAETKPNKTNTKIFECIECKSTFAKQNQLRLHMRSHKKKSHTCKTCAETFTTAQQLQQHKRTHENVKKNNDKETVHICTVCDAKYQNNDNLIQHMLREHTEKEVQSDDNKEEKIFNERLICNVCNKSYLKASNLAAHMGTHTGVKPFECHICGKRFTQGRAHACHMRTHSDAMDKPHRCHVCNKEFEQESQLTVHMKKHSGRSFVCNVCGRSYCNSGNLKSHMRLHTGDKPYACHICGRRFAQSNAHSYHMKTHSGERPFSCDMCPKAFTTNGQLINHRRLHTGEKPFACTICHKRFTQKVAHTIHMMTHTGNKPHLCSICGKKYSQNSQLMEHMRSHTGETLQCSVCGKGYSTAGNLAAHMKTHTGIKSHICSVCNKGFYVANKLAKHMRTHTGERPYACSVCPKRFTSSDVMKVHVRIHTGERPYRCEVCGRGFTNNSQLTVHMRSHTGQRPYVCNICFQGFTTSASLTVHSNSCSNGIRRVSDTAVYSNGTMSYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00399730; iTF_01295368; iTF_00789531;
90% Identity: -
80% Identity: -