Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_036346155.1
Location
JARFIY010000020.1:126423-131310[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 9.6e-05 0.027 17.1 1.1 3 23 31 51 29 51 0.92
2 31 1.3 3.8e+02 4.1 0.0 5 23 68 86 67 86 0.94
3 31 1.1 3.1e+02 4.4 0.8 1 23 118 141 118 141 0.94
4 31 0.0012 0.36 13.6 1.2 1 19 147 165 147 169 0.90
5 31 0.00012 0.035 16.8 0.2 1 20 175 194 175 196 0.95
6 31 1.3e-05 0.0036 19.9 2.5 2 23 210 231 210 231 0.97
7 31 0.1 29 7.6 3.8 3 23 245 265 243 265 0.96
8 31 4.9e-05 0.014 18.0 0.8 1 23 271 293 271 293 0.98
9 31 0.0046 1.3 11.8 2.7 1 17 299 315 299 316 0.90
10 31 0.0072 2.1 11.2 0.2 2 21 360 379 359 380 0.94
11 31 0.0044 1.3 11.9 0.1 1 23 401 423 401 423 0.98
12 31 0.016 4.5 10.2 1.1 1 23 427 449 427 449 0.95
13 31 0.00079 0.23 14.2 0.5 2 23 456 478 455 478 0.97
14 31 0.0056 1.6 11.6 2.5 1 23 484 506 484 506 0.96
15 31 0.00029 0.083 15.6 1.0 1 23 512 535 512 535 0.95
16 31 4.2e-05 0.012 18.2 3.2 2 23 547 568 546 568 0.98
17 31 0.00014 0.041 16.6 0.9 1 23 580 602 580 602 0.96
18 31 0.0058 1.7 11.5 3.3 1 23 608 630 608 630 0.96
19 31 0.00096 0.28 14.0 2.4 1 23 636 658 636 658 0.95
20 31 0.014 4 10.3 0.4 1 19 664 682 664 683 0.97
21 31 2.9e-05 0.0082 18.8 2.4 2 23 715 736 714 736 0.97
22 31 2.9 8.3e+02 3.0 0.0 1 23 762 784 762 784 0.95
23 31 5.2 1.5e+03 2.2 3.6 1 17 788 804 788 810 0.82
24 31 0.015 4.2 10.3 1.0 1 23 816 839 816 839 0.98
25 31 0.00036 0.1 15.3 2.0 1 23 845 867 845 867 0.98
26 31 0.0022 0.64 12.8 0.9 1 23 873 896 873 896 0.97
27 31 3.1e-05 0.0089 18.7 1.7 2 23 908 929 907 929 0.95
28 31 8.7e-06 0.0025 20.4 0.8 3 23 943 963 941 963 0.96
29 31 0.0028 0.79 12.5 1.0 1 23 969 991 969 991 0.98
30 31 9.6e-06 0.0028 20.3 3.8 1 23 997 1019 997 1019 0.98
31 31 0.045 13 8.7 0.3 1 19 1025 1043 1025 1046 0.94

Sequence Information

Coding Sequence
ATGAAAGTTAGGAACTTTTATATAAAGTCAGAACCAGAATCGGAACTGGACGATATAGGACCAATAAGGACGGATAAGCGAATTTTGTCGTGCATAAAGTGCCCCAAGACGTTCACCACATCCGGCTCATTGAGGAACCATCGCAAAATCCACCGCAAAATCCACCGCAAGCTGAGAGAACGATGGCGAATACAACTACCTACTTGCGACACAGAAACAGTAGACAAGAAGGAAATTGCACGACACATTCTGATTCACGAGAACAAGTTCGTGTGCTGCGTTTgtaaaaaggattttctgcatccCTACGAATACAGCTGCCACGTTTACGCCCACGATCCGTCGAAAAGCTTCTCGTGCCCTTTGTGCAAGTATGCCACCCCCTTAAGGACGTGCATGATGGCGCACGTCAACAATTCCCATTTGCACAAGTTCTCCTACACTTGTGAGAAGTGCGGGAAGGGTTTCACGAGCTACACGATGTACAAAGACCACGATAACGTGCACAAAGGTGTCAGGCCGTACCGCTGCGTGGTTTGCGGCAAAACTTTCTCCATTTCCAGTTACCTCAGCACCCATCAGGTTCGCCTTTATAAGGTGACCACCGACGGCCTGATCGGCTCTAACTATTGCCAGGTTTGCGGAAAAAGGTTTAGCCGAAAGTTTTTTCTAGATAATCACATGAAGACGCATGAAGAGCCTGTGATAGTTGTGGTGAAGAAGAAGCACTTGTGCTACATTTGCGGGAAGGAGTTGACGTGTAACGACAAGCTGATGTCTCACCTCAGAACTCACACAGGCGAGAAGCCGTACGCCTGCTCTTACTGCGCCAAAAGTTTCAGAAAGAGAGACTACTTGATCATGCACGAACGGGTGCATAGCAGCGAAAAGTCCTACCCTTGTGAGTACTGCGGGAAGTGTTTCAACCAAAAGACTCCTTTGAAGAAGTATATGCGCAGTTACACGGGGGATGGTCCCTACGTCTGCGACATTTGCCGAGATAGCTTTGTTTCCAAGAGAATACGGTTAAGAAGTGATTTAACGAAGGAGGAGCAGGCGCCGACCCAGCGCGTCTGGCAGTGCACGAAGTGCTTCGCGGCATTTGACACGCCCTTCCTGCTGCAGACCCACCGCAGAATATGGTGCATGCAGGAAGACGACGCGCAGTACAGTTTCCTGTTTGACGAAGATGCTAAGCTGTTCATCTGCAAGGTCTGCGACCTAGAGCTGGCCGATAAAACCGAAATGGAAGACCACGTGCGGACACACGAGGACAACTTCGTCTGCAGCGTATGCAAAAGGAAGTTCTCCGTGGCGTTTGAGTATAGCGTTCACGTTCATGCTCACGATGACTCGAAGGATCTGCAGTGCCCCCTCTGCGAGTTCGCCACTTCCAGGAAATCAACCATGAAGCTGCACATTAACACCAGCCATCTGGGAAAGTATATTTATACTTGCGAAAAGTGTGGTAAGGGTTTCAATGACTGCATTCGGTACAAGGACCACAGCAACGTGCACGAAGGCCTCAAGCCCTTCCGGTGCGTGGTGTGCAGTAAGGAGTTTTCGTATTCCTACTACCTTATCAGCCATCAAATCCAGTCGCATTGGGTCAAAATAGACGGGCTGGTCGGGCCAAACCAATGCTCCGTGTGCTTCAAGCGGTTTGGCAAGAAGAGCACGCTGGAGAAACACATGAAGAAACACGACAACAAGGGCAAGGCCGCTCCCGAGCGGGAGTACCTCTGCGACGTGTGCGGGAAGAGCTTCGGGTACACCCAGAAGCTGAAGATGCATTACAGGATTCACACGGGTGTCAAGCCCTTTTCGTGCTCGTGTTGCTCGAAGAAGTTCGCCAGAAAGGATTACCTGATCATGCATGAGAGGGTGCATAGCGGGGAGAAGCCGTTCTCGTGCAAGTACTGTGGGAAGAGCTTCAACCAGTCGGCTCCGTGTAAGGTCCACGAGCGCATCCACACCGGAGAGCGGCCCTATGTCTGCCACATCTGCCAGGGCGGCTTCATGTCCAAAAGTGCTCTTAATACGCATTTTCCAAACTGCCCTGGAGCTTTattGAGTGTTCGTCCGGAGACCCTATCAAATTGCGAAGCGGGAAGCAAAGCCGTCCGCAGGAAGCGCACGTGGTCGTGCAAGAAATGTTCCGAAACGTTCGCCACGTCCACTTTGTTAAGAAAGCACCGCAAGACTCACCGCAAGCAAACTGACGATTTCCAGATCGCCGATGGCGTTGATTACAGCTACAAGTTCGACGAGGAGCGCGAGGTGTTCGTTTGCACGACGTGCGAATTGGAAACCCCCGCCaaagaggaaatagagaagCACGCATTAGTGCACGAAGACAAGTTTACGTGCGACATCTGCAAGCAGGAATTCTTTAAGCCGTATGAGTACAGCTGCCATGTTTACGACCACGACCAGTCGAAACACTACCCTTGTGCTTTGTGCAAGTTTACAACCTCCAGGAAAACGACTATAATAACGCACATTAATACTTTCCATTTGCGCAAGTACATCTACACGTGCACCAAGTGCGGGAAAGGCTTCAACGACTGCGTCATGTATAAGGAGCACGAGAACATACACGACGGCGTCAAGCCCTTCCAATGCGTCGTCTGCAACAAGGACTTCGCCTTCTCGAACTACTTGCTGTACCACCAAATTCGCAACCACAAGCCGGTGATCGATGGACTGGTTGGGGCGAACCAGTGCCCCGTGTGCCACAAAACGTTCAGCAAGCGGGCCACGTTGGAACGACACGCGGTGAAGCACGACAACAACGAGAAGAGGGTTGTCGAGAAGAAGCACCTCTGCGACGTATGCGGGAAGGGCTTCGCCACCAAAGAGAAGCTGAGAGTGCACTACAGGATCCACACGGGCGATAAGCCCTACTCGTGCTCGTACTGCGAGAGGAGCTTCGCCGCCAGGGTGTGCTTGGTGATGCACGAGCGGATACACAGCGGCGAGAAGCCCTACTGTTGCAAGCAGTGCGGGAAGCGCTTCCGCCAGATAACTCCCTTGAAGGTCCACATGCGCACCCACACCGGAGAGAAGCCCTACGTCTGCCACATTTGCAAGGCCGCCTTTTCGGCGAAAGGCGTCCTGAAGGTGCATTTTTTCAGCTGCCCTGGCAGCTCCAGCTAA
Protein Sequence
MKVRNFYIKSEPESELDDIGPIRTDKRILSCIKCPKTFTTSGSLRNHRKIHRKIHRKLRERWRIQLPTCDTETVDKKEIARHILIHENKFVCCVCKKDFLHPYEYSCHVYAHDPSKSFSCPLCKYATPLRTCMMAHVNNSHLHKFSYTCEKCGKGFTSYTMYKDHDNVHKGVRPYRCVVCGKTFSISSYLSTHQVRLYKVTTDGLIGSNYCQVCGKRFSRKFFLDNHMKTHEEPVIVVVKKKHLCYICGKELTCNDKLMSHLRTHTGEKPYACSYCAKSFRKRDYLIMHERVHSSEKSYPCEYCGKCFNQKTPLKKYMRSYTGDGPYVCDICRDSFVSKRIRLRSDLTKEEQAPTQRVWQCTKCFAAFDTPFLLQTHRRIWCMQEDDAQYSFLFDEDAKLFICKVCDLELADKTEMEDHVRTHEDNFVCSVCKRKFSVAFEYSVHVHAHDDSKDLQCPLCEFATSRKSTMKLHINTSHLGKYIYTCEKCGKGFNDCIRYKDHSNVHEGLKPFRCVVCSKEFSYSYYLISHQIQSHWVKIDGLVGPNQCSVCFKRFGKKSTLEKHMKKHDNKGKAAPEREYLCDVCGKSFGYTQKLKMHYRIHTGVKPFSCSCCSKKFARKDYLIMHERVHSGEKPFSCKYCGKSFNQSAPCKVHERIHTGERPYVCHICQGGFMSKSALNTHFPNCPGALLSVRPETLSNCEAGSKAVRRKRTWSCKKCSETFATSTLLRKHRKTHRKQTDDFQIADGVDYSYKFDEEREVFVCTTCELETPAKEEIEKHALVHEDKFTCDICKQEFFKPYEYSCHVYDHDQSKHYPCALCKFTTSRKTTIITHINTFHLRKYIYTCTKCGKGFNDCVMYKEHENIHDGVKPFQCVVCNKDFAFSNYLLYHQIRNHKPVIDGLVGANQCPVCHKTFSKRATLERHAVKHDNNEKRVVEKKHLCDVCGKGFATKEKLRVHYRIHTGDKPYSCSYCERSFAARVCLVMHERIHSGEKPYCCKQCGKRFRQITPLKVHMRTHTGEKPYVCHICKAAFSAKGVLKVHFFSCPGSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-