Basic Information

Gene Symbol
znf711
Assembly
GCA_036346155.1
Location
JARFIY010000020.1:94619-109325[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 55 0.00016 0.047 16.4 1.3 2 23 43 64 42 64 0.96
2 55 0.17 50 6.9 0.0 1 23 84 106 84 106 0.97
3 55 0.49 1.4e+02 5.5 2.9 1 23 110 132 110 132 0.89
4 55 0.012 3.6 10.5 0.4 1 23 138 161 138 161 0.98
5 55 0.068 19 8.2 3.9 1 19 167 185 167 189 0.89
6 55 0.0009 0.26 14.1 2.3 1 23 195 218 195 218 0.96
7 55 0.00014 0.041 16.6 1.3 2 23 230 251 229 251 0.98
8 55 6.5e-05 0.019 17.7 0.7 3 23 264 284 262 284 0.96
9 55 0.00017 0.048 16.4 1.3 1 23 290 312 290 312 0.98
10 55 5.6e-06 0.0016 21.0 0.7 1 23 318 340 318 340 0.98
11 55 0.011 3 10.7 0.4 1 21 346 366 346 367 0.94
12 55 0.028 8.1 9.4 3.7 3 23 399 419 397 419 0.97
13 55 0.1 29 7.6 0.1 1 23 439 461 439 461 0.97
14 55 6.6 1.9e+03 1.9 2.7 1 23 465 487 465 487 0.93
15 55 0.031 9 9.2 0.2 1 23 493 516 493 516 0.97
16 55 0.014 3.9 10.4 3.0 1 19 522 540 522 544 0.90
17 55 4.8e-05 0.014 18.1 1.4 1 23 550 573 550 573 0.95
18 55 0.0033 0.94 12.3 4.1 2 23 585 606 584 606 0.98
19 55 2.4e-05 0.0068 19.0 1.0 3 23 620 640 618 640 0.96
20 55 3.3e-05 0.0094 18.6 2.1 1 23 646 668 646 668 0.98
21 55 1.4e-05 0.0039 19.8 0.6 1 23 674 696 674 696 0.98
22 55 0.083 24 7.9 0.2 1 19 702 720 702 721 0.95
23 55 0.00011 0.032 16.9 0.5 2 23 753 774 752 774 0.96
24 55 1 2.9e+02 4.5 0.0 1 23 794 816 794 816 0.94
25 55 0.43 1.2e+02 5.6 2.0 1 16 820 835 820 842 0.80
26 55 0.00047 0.14 14.9 0.6 1 23 848 871 848 871 0.98
27 55 0.00021 0.06 16.1 1.6 1 23 877 899 877 899 0.98
28 55 0.0089 2.5 10.9 1.7 1 23 905 928 905 928 0.95
29 55 0.00018 0.051 16.3 0.7 2 23 940 961 939 961 0.96
30 55 1.4e-05 0.0039 19.8 1.2 3 23 974 994 972 994 0.96
31 55 1.9e-05 0.0053 19.4 0.8 1 23 1000 1022 1000 1022 0.98
32 55 6.3e-06 0.0018 20.9 2.7 1 23 1028 1050 1028 1050 0.99
33 55 0.015 4.4 10.2 0.1 1 20 1056 1075 1056 1075 0.97
34 55 0.0072 2.1 11.2 3.1 2 23 1114 1135 1113 1135 0.96
35 55 0.13 38 7.3 0.0 1 23 1155 1177 1155 1177 0.98
36 55 0.4 1.2e+02 5.7 0.7 1 14 1181 1194 1181 1195 0.89
37 55 0.0056 1.6 11.6 0.5 1 23 1209 1232 1209 1232 0.98
38 55 0.011 3.2 10.6 2.3 1 19 1238 1256 1238 1260 0.90
39 55 0.0002 0.058 16.1 0.4 1 23 1266 1289 1266 1289 0.95
40 55 0.00016 0.047 16.4 3.3 2 23 1301 1322 1300 1322 0.98
41 55 0.0072 2.1 11.2 2.2 3 23 1336 1356 1334 1356 0.96
42 55 6.1e-06 0.0018 20.9 1.2 1 23 1362 1384 1362 1384 0.98
43 55 1.3e-05 0.0039 19.8 1.3 1 23 1390 1412 1390 1412 0.98
44 55 0.26 75 6.3 0.3 1 20 1418 1437 1418 1439 0.92
45 55 0.0003 0.085 15.6 0.2 2 23 1485 1506 1484 1506 0.96
46 55 5.2 1.5e+03 2.2 0.1 1 23 1524 1546 1524 1546 0.90
47 55 0.012 3.5 10.5 4.0 1 23 1550 1572 1550 1572 0.97
48 55 0.29 85 6.2 2.6 1 23 1578 1601 1578 1601 0.97
49 55 0.00096 0.28 14.0 3.5 1 23 1607 1629 1607 1629 0.96
50 55 0.00034 0.097 15.4 4.0 1 23 1635 1658 1635 1658 0.97
51 55 0.00013 0.037 16.7 4.2 2 23 1670 1691 1669 1691 0.98
52 55 0.0072 2.1 11.2 0.1 1 23 1703 1725 1703 1725 0.95
53 55 0.00024 0.068 15.9 0.4 1 23 1731 1753 1731 1753 0.97
54 55 1.2e-06 0.00034 23.1 1.7 1 23 1759 1781 1759 1781 0.98
55 55 0.054 15 8.5 0.4 1 21 1787 1807 1787 1808 0.93

Sequence Information

Coding Sequence
ATGCCTTACGCTGTGAATGTTTGCAGAGATCAGATCTTCCCCAATTTGACACACGAAATCGTGATCAAAGAAGATCTAAGTGAGTCGCCGGCCTCCAAGAAGAAGCGCGCGAGCAGCCGTCCGTGGCCGTGCAGGAAATGCAACATCACCTTCATCACATCCACGCTGCTGAAGAACCACCGGAAGACGCACCGCAAGCAAGACACCGAAATGAAGTACAAGTACCGGTATGACGAGACGCGGCAACTGTTCACTTGTAAGACTTGCGACCTAGAGTTGGCCACCAAGGAGGCAATAGAGGAGCACGTGCTGGTGCACGAGGACAAATACGCGTGCGAGATTTGCAAAAAGGAGTTCTACAAACCCTATGAATTCAGCTGTCACGTCTACAGCCATGACCAGTCTAAAGGGTTCCGTTGTCCTCTATGCCAGTTTGTCACTCCTAGAAGAACAAGTATTATGATTCACATCAACACCTATCACTTGCGCAAGTACATTTACACCTGTACCAAGTGTGGTAAAGGTTTCAACGACTGCAATTTCTACAAAGAACACGATAACGTGCATGAAGGTATCAAACCTTTTGTTTGTGTCGTCTGCAGCAAATCTTTTCCGTTCTCAAGCTACCTCAGTACTCACCAAATCCGTTGCCATAGAGTCACCATAGAAGGAACCATAGGGAAAAATCAGTGCCCTGTGTGTTACAAGAGGTTCAGCAGGAACAATGTGCTGGGGAAGCATATGAAGCGGCATGAGAACAAGAAGGTTGCTCGCGAGAAGAAGCACCTCTGTGACGTTTGTGGGAAGGGTTTTGGAACCAATGAGAAGCTGAGGGTCCACTACCGCGTCCATACGGGCGAAAAGCCATACACCTGCTCTTACTGCGCCAAGAGTTTCACTATGAAGCAGTACTTGATCATGCATGAGCGGGTGCATAGCGGCGAGAAGCCATACTCTTGTGAGTACTGCGGGAAGTGCTTCAACCAAGAGGCTCCGTTGAGAATTCACGTACGCATCCACACTGGGGAGCGGCCCTACGCTTGCCACATCTGCAAGGCGAGCTTCGTGTCTAAGGCGGTACTGAATCTGCATTTCCGAAAGTGCCCTGGAATACCGTTTCTGGGCGCGATCAAGAATCAGCAACCTGAGCAGCCAACCCCCAGAAAGCGGCGCACGAAAAACCGCACGTGGGCTTGCAAGAAATGCAGCATGACCTTCGTGACCTCCACGCTGCTTAAGTGTCACCAGAAGACGCACCGCAAGCAAGATGTCGAAGCGAAGTACAAGTACCGGTACGATGAAGAGCGGGAGCTATTCGTCTGCAAGACCTGCGATATTGAGCTGACCCACAAAGAGGCAATAGAGGAGCACGTGCTGATTCACGAGGACAAATACGCTTGCGAGGCTTGCAAGAAGGAGTTCTTCAAACCCTACGAGTTCAGCTGCCATATTTACAGTCATGACCAGTCGAAAGGCTTTCCTTGCCCTTTATGCCAGTTTGTTACTCCTAGGAGGACAACGATTATGATACACATCAACACCTACCACTTGCGCAAGTACATCTACACTTGCACCAAGTGCGGCAAGGGTTTCAACGACTGCAATTTATACAAAGAGCACGATAATGTGCACCAAGGCATTAAGCCTTTCGAGTGTGTGGTCTGTGGGAAGTCTTTTACGTTTTCAAGTTACTTATATACTCATCAAGTCCGCTATCATAGAGTCGCCATAGATGGGACGATAGGGAAAAACCAGTGCCCTGTGTGTTGCAAGAGATTCAGCAGGGACAACACACTAGAGAAGCATATGAAACGTCACGAAAATAGACAGAAGGTTGCTCGTGAGAAGAAACATCTCTGTGACGTGTGCGGGAAGGGTTTTGCCACCAACGAGAAACTGAGATCTCACTACCGCGTCCATACGGGTGAGAAGCCATACACTTGCTCGTACTGCTCAAAAAGCTTCACCGTCAAGCAGTATCTGACTTTGCATGAGAGAGTGCACAGCGGCGAGAAGCCCTACTCTTGCGAATATTGCGGCAAGTGCTTTAGTCAGGGGGCTCCGCTGAGGATCCACGTGCGCATTCACACCGGGGAGCGGCCCTACGTTTGCCACATCTGCAAGGCCGGCTTCGTGTCCAAAGGTGTGTTGAATTTGCACTTTCCACACTGTCCAGGGAGGAGCTTGCTCGTGGAGGTAGTGATGAAAGATGAGCCCGAGGCGGCGCCCAAGAAGCGCAGGGGCGTAGGCAAGTGGCCGTGCAAGAAGTGCCCCGAGACCTTTGCGACGTCCACTCTGCTGCGCAGCCACCGCAAGCTGCACCAGAAGCAGGAGCCGGACGCGCAGTGCAAGTACCGCTACGACGACAAGGGTGACCTGTTCGCGTGCAAGACCTGCGACTTCGAGGTTGCCGACAGGGGCGAGATCGAGCAGCACGTCCTGGAGCACGAGGACAAGTTCGCGTGCCCCACGTGCGGCAAGGCCTTCATGAACCTCTACAAGTACAGCTGCCACGTCTACGACCACGACAGGTCGAAGGACTTCCAGTGCCCGCTCTGCAAGTACTCGACGAGCAGGCGGGCGGCCATACTGACCCACATCAGGACGTACCACCTGCGCAAGTACACCTACACGTGCCCGAAGTGCGGCAAGGGCTTCAACGACTGCGTGCTGTTCAAAGATCACAGCAACGTCCACGACGGGATCAAACCCTTCCAGTGCATAGTTTGCAACAAGGAGTTCACTTTCTCGAGCTACCTGCTCTACCACCAAATTCGCAAGCACAAGCCCGTGATAGACGGCATGGTGGGGGCTAATCAGTGCCCTGTTTGCTTCAAGAGGTTCAGCAAGCGGGCCACGTTGGAACGGCACGCGGCGAAGCACGACAACAAGAAGAGGGTTGTCGAGAAGAAGCACCTCTGTGACGTGTGCGGGAAGGGCTTCGTGACCAACGAGAAGCTGCGGATCCATTACAGAACTCACACCGGGGACAAGCCATACGCCTGCTCATACTGCCCCAAGCGCTTCACCAAGAAGGACTATTTGGTCATGCACGAGCGGGTGCACAGCGGCGAGAAGCCCTACTCCTGTGAGCACTGCGGAAAGTGCTTTAACCAGCTGGCTCCGTTGCGCGTCCATGTGCGAACCCACACAGGAGAGCGACCCTACGTCTGCCACATTTGCAACGCCGGGTTTGTCTCTAGAGGCGTGCTTAACTTGCACATGCCGCATTGCCCTGGCAGGCCAGAGGTGGGTTTAGAAGCCATTTTTACCACAATCAAGCACGAGTACGTCGAGGAGGCGGCCCCGCAAAGGCGGCAGAGGGGCAGGCGTGCGTGGTCGTGCAAGAAGTGCTCGGAGAGCTTCGGCACGTGCAGGCTGCTGAGGGAGCACAGGAAGGTGCACCGCATGCAAGAGGACGACGCGCAGTACAACTACAGGTACGATGAGAGCCGCGGGGTGTTCGTCTGCTACACGTGCGACCTGGAGGTGGCCGACAAAAAGGAGATCGAGCAGCACATCCTGGTGCACGAGGACAAGTTCACCTGCGACGTGTGCAACAAGGAGTTCGTGAAGCCGTACGAGCACAGCTGCCACGTCTACGAGCACGACAGGGCCAAGGGCTTTCAGTGCCCCCTCTGCAAGTACAACACGCCCAGACGGACGGCCATCAAGGTGCACATCAACACTTACCACTTGCGCAAGTACATTTACACGTGCACCAAGTGCGGGAAGGGCTTTAACGACTGCGTGCTGTACAAAGAGCACGACAACGTGCACGAGGGCATCAAGCCTTTCCAGTGCGTCGTCTGCGGCAAGGAGTTCGCCTTCTCGAGCTATCTGATATATCACCAAGTTCGCAATCACAAGCCTGTAATAGAAGGGATAGTGGGGGCAAACCAGTGCCCTGTTTGCTACAAAAGGTTCAGCAGGCACAACACCTTGGAGAAGCACGTACAGAAGCACAATAATATAGGGAAAACCATCCGCGAAAAGAAGCATCTTTGCGACATATGCGGAAAGGGGTTTGCCTGCAACGAGAAGCTAAGGATCCATTATAGGGTCCATACGGGCGACAAGCCCTACACCTGCTCCTACTGCCCCAAAAGCTTCACCAAGAGAGACTACTTGGTTATGCACGAGCGGGTGCACAGCGGAGAGAAGCCCTACTCCTGTCAGTATTGCGGAAAGTGCTTCAACCAGGGGGCGCCGTTGCGCGTCCACATCCGCAGCCACACCGGAGAACGGCCCTACATCTGCCACATTTGCAAGAATGGCTTCATATCGCGGGGAGTTCTTAACTTGCATTTCCAAAGTTGCCCGGTAACACCAATTCGTTTCAGGAAAACAGCCGTGAACGTGGAGGAAGTGATAATCAAAGACGAGGTGCCCGATGAGGCCGAGGCTCCTCCGAAGAAGCCGCGGAGGCCGAGGAGGAACCACCACCAGTGGTCCTGCGCGAAGTGCGGCGAGGTTTTCGTGACACTGAAGCTGCTGCGCAACCACAACCGGGTGCACCGCAAGCAGGAGGCGCAGAGCAAGTACCAGCGCGATGAGAAGCGAGGCCTGTTCGTCTGCAAGACGTGTGACTTCGAAGAGGTCGACGAGAACGAGATGGAGCGGCACCTGCTGGAGCACGAGTACAACTTCGAGTGTCGCTTCTGCAGCAAGGTGTTCACCAAGCCCTACCTCTTCAGCACCCACGTGCACTCCCATGAGCCCACGAACGACTTCCACTGCCCCTTCTGCAAGTACACCACGCCCAGGCGACCCACCATACTGACCCACATTAAGTCCTTCCATTTGAGGAAGTTTACTTACAAGTGCGATAAGTGCGGCAAGGGGTTCAATAACTGCGTGCAGTTCAAAGAGCACAACAACGAGCACGAGGGCATCTCGCCGTTCGAGTGCGTCGTGTGCAACAAGACCTTCACATTCTCAAGCTATCTGTACAACCACCAGATACGCTGCCACATACCTGTGATAGATGGTATCGTTGGGGAGAACCAGTGTCGCGTTTGTTTCAAAAGATTCACCAAAAAGAGTACACTAGAGAGGCACCTGAAAAAGCACGACAACAAAGGGAAGGCCGTAAGGGAGAAGAAGTATCTGTGCGATATATGCGGGAAGGGCTTCGCGGCCGGGCAAAAGTTGCGCTCTCACTATCGGGCCCATACAGGGGACAAGCCGTACGCGTGCACCTCTTGCGGGAAGAGCTTTGCTGTGAGGGAGTGCCTGATCGTCCATGAGCGCGTGCACAGCGGCGAGAAGCCTTACGCCTGCGAGTACTGCGGAAAATGCTTCAGCCAAAGCACCCCACTGAAGATCCACGTGCGCACCCACACTGGAGAAAGGCCCTACGTCTGCCATATCTGCACCGCTGGTTTTGTGTCCAAAGCTGTCCTCAACCTTCACTACCATAAGTGTCCCGGAATTTCTGATTGA
Protein Sequence
MPYAVNVCRDQIFPNLTHEIVIKEDLSESPASKKKRASSRPWPCRKCNITFITSTLLKNHRKTHRKQDTEMKYKYRYDETRQLFTCKTCDLELATKEAIEEHVLVHEDKYACEICKKEFYKPYEFSCHVYSHDQSKGFRCPLCQFVTPRRTSIMIHINTYHLRKYIYTCTKCGKGFNDCNFYKEHDNVHEGIKPFVCVVCSKSFPFSSYLSTHQIRCHRVTIEGTIGKNQCPVCYKRFSRNNVLGKHMKRHENKKVAREKKHLCDVCGKGFGTNEKLRVHYRVHTGEKPYTCSYCAKSFTMKQYLIMHERVHSGEKPYSCEYCGKCFNQEAPLRIHVRIHTGERPYACHICKASFVSKAVLNLHFRKCPGIPFLGAIKNQQPEQPTPRKRRTKNRTWACKKCSMTFVTSTLLKCHQKTHRKQDVEAKYKYRYDEERELFVCKTCDIELTHKEAIEEHVLIHEDKYACEACKKEFFKPYEFSCHIYSHDQSKGFPCPLCQFVTPRRTTIMIHINTYHLRKYIYTCTKCGKGFNDCNLYKEHDNVHQGIKPFECVVCGKSFTFSSYLYTHQVRYHRVAIDGTIGKNQCPVCCKRFSRDNTLEKHMKRHENRQKVAREKKHLCDVCGKGFATNEKLRSHYRVHTGEKPYTCSYCSKSFTVKQYLTLHERVHSGEKPYSCEYCGKCFSQGAPLRIHVRIHTGERPYVCHICKAGFVSKGVLNLHFPHCPGRSLLVEVVMKDEPEAAPKKRRGVGKWPCKKCPETFATSTLLRSHRKLHQKQEPDAQCKYRYDDKGDLFACKTCDFEVADRGEIEQHVLEHEDKFACPTCGKAFMNLYKYSCHVYDHDRSKDFQCPLCKYSTSRRAAILTHIRTYHLRKYTYTCPKCGKGFNDCVLFKDHSNVHDGIKPFQCIVCNKEFTFSSYLLYHQIRKHKPVIDGMVGANQCPVCFKRFSKRATLERHAAKHDNKKRVVEKKHLCDVCGKGFVTNEKLRIHYRTHTGDKPYACSYCPKRFTKKDYLVMHERVHSGEKPYSCEHCGKCFNQLAPLRVHVRTHTGERPYVCHICNAGFVSRGVLNLHMPHCPGRPEVGLEAIFTTIKHEYVEEAAPQRRQRGRRAWSCKKCSESFGTCRLLREHRKVHRMQEDDAQYNYRYDESRGVFVCYTCDLEVADKKEIEQHILVHEDKFTCDVCNKEFVKPYEHSCHVYEHDRAKGFQCPLCKYNTPRRTAIKVHINTYHLRKYIYTCTKCGKGFNDCVLYKEHDNVHEGIKPFQCVVCGKEFAFSSYLIYHQVRNHKPVIEGIVGANQCPVCYKRFSRHNTLEKHVQKHNNIGKTIREKKHLCDICGKGFACNEKLRIHYRVHTGDKPYTCSYCPKSFTKRDYLVMHERVHSGEKPYSCQYCGKCFNQGAPLRVHIRSHTGERPYICHICKNGFISRGVLNLHFQSCPVTPIRFRKTAVNVEEVIIKDEVPDEAEAPPKKPRRPRRNHHQWSCAKCGEVFVTLKLLRNHNRVHRKQEAQSKYQRDEKRGLFVCKTCDFEEVDENEMERHLLEHEYNFECRFCSKVFTKPYLFSTHVHSHEPTNDFHCPFCKYTTPRRPTILTHIKSFHLRKFTYKCDKCGKGFNNCVQFKEHNNEHEGISPFECVVCNKTFTFSSYLYNHQIRCHIPVIDGIVGENQCRVCFKRFTKKSTLERHLKKHDNKGKAVREKKYLCDICGKGFAAGQKLRSHYRAHTGDKPYACTSCGKSFAVRECLIVHERVHSGEKPYACEYCGKCFSQSTPLKIHVRTHTGERPYVCHICTAGFVSKAVLNLHYHKCPGISD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-