Sper077926.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- -
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000351.1:4131167-4132368[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-08 4.4e-05 25.4 0.0 3 37 12 46 10 52 0.91 2 2 1.3 2.7e+03 0.4 0.0 7 26 246 266 244 268 0.82
Sequence Information
- Coding Sequence
- ATGACGAAACTGCCCAAAGTCCCGTACATGCAAGAGGCGCTTAACCAAGCAGTGGCAGCTGTGAAAAATGGTATGTCAAAGAAACAAGCTGTGCGGCAATTTGGAACCCCGAAGGTTACTTTACAATTTCGGGTTTCTAAGAAATTTAAGGTGTCACTGAGGCCTCCACTTGTATTATTAGCTGACGAAGAAAATCTTCTTGCCGAATGGATAGCTGTTTCTGCTAGAAAGGGCCAACCCCTGGAGATCAGAAGTTTTAAAGTTAACTGTAAAAGAGTTGAAGTAACCAGAGCTAGCACCTGCGTTTCCAAGCCTGATGTTAGAAAGTGGTTTGATCAGGTGCGTGCAAGCCTGGAAGAGGACGGCGTCGTAGATGTTTTGAGCGACCCCACGAGTGCCCCACTGATCATTTATTCCTACAAGAGCAGAATTCCTGGAGACATAAGTAAGTCTGTTGTGGACGCAAGTGGTGATTGGGGTGTCGGGCACTCAGAGACAGGGTGGATGACAAGCGAGGTTTTCTACGAGTACGTAGGGAAGATTCTTAACGATTTTGTAGCTGAAAAAGGGATAAAAAAGCCAGTAGTCTTGTTTGTTGATGGGCACAAAACTCATCCTTGCGACATAGGAATATTCAGGCCCTTAAAAACAGCATGGAAAAGGGAATCACTGGCCTGGTACCATAGTCACCTTGGTGAAATAATAACGAAAGTTTGTTTCGCCCCGTTACTCAAAAATGCCATGAAAAGTATTTCAAAAGAAACTATGATAAGTTCATTCAAAGCTTCTCGACTTTACTCCTTCGATTCTAATTCCATAGACTTTACCAATTGCCTAGGAGGCAAGGAGTCGCAAGCCACAGTCATCACCTGa
- Protein Sequence
- MTKLPKVPYMQEALNQAVAAVKNGMSKKQAVRQFGTPKVTLQFRVSKKFKVSLRPPLVLLADEENLLAEWIAVSARKGQPLEIRSFKVNCKRVEVTRASTCVSKPDVRKWFDQVRASLEEDGVVDVLSDPTSAPLIIYSYKSRIPGDISKSVVDASGDWGVGHSETGWMTSEVFYEYVGKILNDFVAEKGIKKPVVLFVDGHKTHPCDIGIFRPLKTAWKRESLAWYHSHLGEIITKVCFAPLLKNAMKSISKETMISSFKASRLYSFDSNSIDFTNCLGGKESQATVIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -