Sper025636.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- lola
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000099.1:15925378-15926804[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-09 1.2e-05 27.1 0.0 8 39 362 394 357 400 0.87
Sequence Information
- Coding Sequence
- ATGGAAGACGACCAGCAGTTCTGTTTAAGGTGGAACAATCATCAATCCACATTAGTTGCAGTATTCGATACTCTTCTAGAAAAAGGGACCTTAGTGGACTGCACCCTGGCTGCCGAAGGAAAATACCTCAATGCCCACAAAGTTGTTCTGTCTGCATGCAGTCCATATTTTGAAtCTTTGCTTTCACAAAACTACGATAAACATCCGATATTCATATTGAAAGATGTCAAATTCCAAGAACTGAAAGCAATGATGGACTACATGTACAGGGGGGAAGTAAACATATCACAAGACCAGCTGGGGGCACTGCTGAAGGCTGCAGAGTCCTTGCAAATAAAAGGCCTGTCAGACAACAAAAAAGACAGCGAATCGCGGAAGCAGCCGCCTCCGCCCCCGCCGGCAAAGAGCCCACCCCCGACGGCCTCTCTGCCACGTGTCCAGGGCCTGACGATAGAGCAGCGCCGGGCAAACAGGGACCTGGATGACAGCCGCGAAGGCTCACAGTCACCGGGTCCGCGTAAACGAAAGAGAGTGAGGCGCAGAAGCACAGACGACCTAGACAACCACCATGACGCCTCAAACTCCTCCGAATCTCACAGTAATTCGGCGCCTGCCCAAAACATTCCAATAGCGTTACCCGCCTCCTCGAAAACTGCCGATGTGCCTGAACACTTAGAAACCAAATCTGAAATTCTGGCGAGGCAGAAAGTGTCTACCAGCAGCGAGTCAGAGATTCCCCAAGTTCCTATAATTAAAGAGAAGATAGAAACACATTCTGAACTGATTTTAGAACCAAAGTCTGAGTATGTGGAAGAGATGAATGAGGAAAGTATAGAGGACTTGACGCTGGATGATGACGACGATGTTAGTAATTTGGATATGAGCAATGATGGTGCTGGGCCGAGTCATGGCAACGCGGGCGAAGGATCGAGCCAAGATGGGAACACCTGCGGAGGGTACCCAATTCCACCAGACAGTAACTGGCGCTATCGGCAGTGCTCGTCGCTTAGAATCGACCTCGAGCCTATGCTCGAGCAGGTTCAGTTCCCCTTTCGTAAATACAACAAAGACACTGTCAAGTTTGCTCTCGATGCCATCCTAAACGATGGCATTAGCGTCACGCAGGCGTCGATTATTTATGGAATCAAACGCACTAGCCTGCAGCACTACCTCAAGCGGCTGAACATCAAAGTTCGGCAGTTGTAA
- Protein Sequence
- MEDDQQFCLRWNNHQSTLVAVFDTLLEKGTLVDCTLAAEGKYLNAHKVVLSACSPYFESLLSQNYDKHPIFILKDVKFQELKAMMDYMYRGEVNISQDQLGALLKAAESLQIKGLSDNKKDSESRKQPPPPPPAKSPPPTASLPRVQGLTIEQRRANRDLDDSREGSQSPGPRKRKRVRRRSTDDLDNHHDASNSSESHSNSAPAQNIPIALPASSKTADVPEHLETKSEILARQKVSTSSESEIPQVPIIKEKIETHSELILEPKSEYVEEMNEESIEDLTLDDDDDVSNLDMSNDGAGPSHGNAGEGSSQDGNTCGGYPIPPDSNWRYRQCSSLRIDLEPMLEQVQFPFRKYNKDTVKFALDAILNDGISVTQASIIYGIKRTSLQHYLKRLNIKVRQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01345791;
- 90% Identity
- iTF_01345791;
- 80% Identity
- iTF_01345791;