Sper019263.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- mbr-1
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000056.1:32706027-32706419[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-10 1.9e-06 29.8 0.0 2 40 16 54 15 58 0.94
Sequence Information
- Coding Sequence
- ATGGTTCGAAACTATCAATGCAAAACCCAAGAAGCCGCTTATACAACTGAGGACTTACAAAGAGCCATAGAACATGTGAAGTTTGGAAAATGTGACACATTGCGTGCTAGCAAACTATTCAATATCCCTAGAAGTACATTAAAGGACCACATCAAGGGTCGTAGAGGTATCAAGAGTGATACAATGGAAAGACCTACAGCGTTACCAGCCAAAGATGAAGAAGTTCTTACAAAAGGAATCACATGCCTCGAAAAATTGGGGTTTGGGCTTAGCCGTAAAGAAATCCTAGATATTGTAGGCAAGTATATTACACAGAAACAGCTCAAAACTCCATTCAAGGACAATGTACCTGGAGAAGACATAATTTGTCAATCAAAAAACCTGAAGCCTTAA
- Protein Sequence
- MVRNYQCKTQEAAYTTEDLQRAIEHVKFGKCDTLRASKLFNIPRSTLKDHIKGRRGIKSDTMERPTALPAKDEEVLTKGITCLEKLGFGLSRKEILDIVGKYITQKQLKTPFKDNVPGEDIICQSKNLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464644;
- 90% Identity
- -
- 80% Identity
- -