Sper055864.1
Basic Information
- Insect
- Sinelater perroti
- Gene Symbol
- retn
- Assembly
- GCA_036346155.1
- Location
- JARFIY010000254.1:25002962-25014614[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-20 5.6e-16 61.0 0.0 14 89 105 178 97 178 0.92 2 2 2.7 3e+04 -2.3 0.0 5 15 278 302 275 335 0.43
Sequence Information
- Coding Sequence
- ATGAGTGATTCGCCTAATGAGGAGAGCCCCCATATCTCGGGACAACTGGAGTTTGGCCCACGGATGCTTATGCTCAATACTCGCAGCAATCCCGTTTCCGGAACTTCTCCCCTCTGTCAACCAGGGGACGTGCTCTCTAGAAGCATCCCCGCGCCTTTCAAATGGAGATTTTACGTGAGCTGCCAGCCGCCCATCCGGAATCCTTCCAAAGCCGCGTTATCGCAATCGGCTTCCGCGACACGCGAACATTTGTCGGACCAGCGAGGCCCGAAGTGTGCACTAAATCAACGTCGCCGAGCTGCTAAAAGGATGAATTATTTTGGCACCCCCATCAACCGGCTGCCCATAATGGCGAAGTCGGTCCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGGGGCGGCCTTGTCGACGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTCCATCTGCCCTCCTCGATCACGTCCGCTGCTTTTACTTTAAGGACGCAATACATGAAATACCTGTACCCCTACGAATGCGAAAAGCGCCGCCTGTCTACGCCGGCGGAACTCCAAGCAGCGATCGACGGCAATCGCCGCGAAGGGCGGCGCAGCAGCTACGGCCAGTACGACAACATCCAGAGATCCCCCATCCCGTCATCCCAGATGTCGCCCCTGTCCCTGGTGTCCCAGCACCAGCAGCTGACCGCGCGCATGAACTCCGTGATGAGCGGCGGCATTAGCCTCCATAACGGAGCACATCACCCCAGTCACCCCCAGCCCATGGGGCAGCCGCTCAACGGCGGCCCGATTCCCGGCCTAGCCCCCAGCGAGTTCGAGGCGCGCATGATGGAGTACATGAAGCTGCTCAACAAGGACATCCGTAGCAGTGCGGCGACGCCTCCGAGGCAGGGGGACTCGTCGCCTCCGAGCGCTACGTCTCCTCTGAACCCCCTGGAGATGTCTCGCATGGCGCTGTGGAATCTCTACAACAACAACCAGTTGCAGAACGAGCCCCAGAAGGAGGCGCTGAATTTAGCCGACACTTTGCCGCACACGGCTCCCATCCAGCAGCCGGCCGTCAAGAGGGAGTCAGAACGAGACAATTCTCCACCTGCCAAAAAATTCGTCAAGGAAGAGGAAGAGCCCAAACCCGTCATGCCTAGTACACATATCAAGATAAACAGCAGAGGGGACTCCCGCAACGGGGACAACTCGCTGGTCGTCAGCATGGAACTCAACGGCGTGACGTACCAAGGGGTGCTGTTCGCGCAGACGCCGCCACCTGGCGGCCGGACGGCGCTGGCCTCGTAA
- Protein Sequence
- MSDSPNEESPHISGQLEFGPRMLMLNTRSNPVSGTSPLCQPGDVLSRSIPAPFKWRFYVSCQPPIRNPSKAALSQSASATREHLSDQRGPKCALNQRRRAAKRMNYFGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDNIQRSPIPSSQMSPLSLVSQHQQLTARMNSVMSGGISLHNGAHHPSHPQPMGQPLNGGPIPGLAPSEFEARMMEYMKLLNKDIRSSAATPPRQGDSSPPSATSPLNPLEMSRMALWNLYNNNQLQNEPQKEALNLADTLPHTAPIQQPAVKRESERDNSPPAKKFVKEEEEPKPVMPSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQTPPPGGRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -