Basic Information

Gene Symbol
JARID2
Assembly
GCA_036346155.1
Location
JARFIY010000294.1:87608-100066[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-22 4.5e-18 67.7 0.0 7 89 1241 1321 1236 1321 0.93

Sequence Information

Coding Sequence
ATGTGCGCCGAAGTCAGAGTCACGAGAGCAAGCCGCCCCTTACTTTCGTCCATCAGAGAACAGAGAGTGAAGCGCAAGATACAAATCTCCAAATCACTCCCTACAAAAACGCCGTTCGTGAAACTAACGCCTACAAAAACTTACTCGCCTAGGCTGAAGCAGCGCGAAGAACAGGCTAAGCAGGAGAAATTTAAGAAGCccgaaaaaataaacaagaccgTGTCGATACCTGAAGGAGATAAACCGAAAAGAGAAGATATTAAGAAAGATTCAAAAGTTAAACCCGAAAAATCCGAGGAAACAGTTTTAACCGAAAAGTGCACCAAAAGAATGTCCGACAGGTCGCTGGAAATGAGAAGACTGCTTAGAAATGATGCTACACCGACTGAGAGAGATGTGAAGAAAAAGGCGCCAACGAGCACAGCTGCTGTGGACAAAGATAATGTGAAAAAGAAACTTCGAAAATTTGACACTGCATTAGAAAAAccccaaaagaaaaatacagaaaaagcaaatgtttcGACAGAAAAAgattctaaaaagaaatttgataagTCTTCAGAAAAGAAACTTAGTAACCCAGAGTGTATTCCAGAAAAAGAATCGAGGAAATCTACATTTGCTACAAAACTAGAAGTTGTGCAACAAAAGAAGACTGCTGAAGCTGCAGGGGAGaagaaaaaaacggaaaaaactGAGAGTCCAGATAGAAAAAATTCACCGgataggaaaaaaattgaaacgcTTGATGCtgtagaagacaaaaaaaaccCTGATGCACCAGAGCCTTCttacgaaaagaaaaaaatagacaaagtCGAACCCgtggttgaaaataaaaagtcagATAAACCTGAACTTGTGTCTGacaagaaaaaaggagaaaggCTTGACCCTATACCCattgaaaaaaagaaatctGAAGGTAGTCCAGAGAAGAAAAAATCTGATAAACCAGAAACACTCGTGGAGAAGAAGAAACCCGTAAAAGCTGAAAGTGttacagaaaaaaagaatacaGTCAAGACTGAAATGCACGCTATCGAGGAACCTCGCATTTCTCAAAGGCCTTCGAGGAAAACCAAGGAAGCGGCGGCAATTTACATGGAAATTCTTGGCCACAAGCTCGTCAatgaagaagatattgacgatGACAATATTTCAATAGACAGTTTTCCAGAGCTCCCAAATGTGCGTAAAACTgaacaaagagaaaatgaaCTGAAAGCCAAAGcaactaaatctaaaattagCGAATCTGCCGACAAATCTGGGTTGGGTATTGTAAATGACGATAAAACATCTcctgttaaagttaaaaattctgAAACGGAAACTAAGAGCGTTCAAGATAATtctgtgaaaaaattaaagatcgCTGAAAATTCTAAGAACAAAGTAGATATTTTTTCAGACTCTGATTCgtcattaaaaaaagtaaaaggtaAGACCAAAGAAGTGCTACTAAGAAAATCAGATTCAAATGTTGATACAGCAAAACGCTTTACAAGAGCGTCTCTTCAAAATAAATCCTCAATAGATACCAGTAGCAGTGAAGCAGAAGATATTGAGGAAGAACATGCAGTAACAAACAAGAAACAAgctcttaaaaaattaagagataCAACTAATAGTGCACCATCCaagctagaaaacaaaaaagtgggTAAGTCTTCTATTAAAACCAGATCTCAAGTTTTAGGAAGTAATGAAAGTGACACATCTGATAATGAGTCCACGACGTCAAAAAGGAGCCAAGATCAACCCAAAAATTTGGCGAATAAtaaaaagctgattaaaatgtGCAGTGCAAAATTGGATAATAGTTTTAGTGACTCGGATGAAGAACCATTATCGAAATTCACTCAAACCAAATCGAAAAGCGATATCACTGAGGATTATCAAGTAAATCAAGTAGAACCAGTTAAAGACGCCCAAAAAAATCTGCTTAACAGAAAATCTGTGGAAACAGAATCAACTGCTGATTCTAAAACAAGTAGCAAACGAGAATCTATCACAAAATGCACAAAACGTGATCCGTCGCTTCAAAAAGTTGCGAAGCCTCAAGAAAAAAAGGAATCGGAAAACGAGCCCCTTCCTCCTTTAATAAACAAGCCAAAGCGGGAATGCACAAAGAAACCGCAGAATTATCTCACTCTCTTTTCGTCTTCTGAAGACGAGGACAAATATTTTCATGGTTTTGTTAAAAGCGAAAATGCTagacaaaaatgtattatacaaGAGCTGCAGTGTCATCCTCCGGCTTCTTCGGATCTCCTATGTAAAGATGTAGACAAAAGATTTGGAAGGGGCAAGGTGAATATGTCCACAGAACAAATTGAGAAATGGTTAAAGGATAGCGCTTTAGCGGGTAGTACTGTGAAAAAGGAAAACTTTGAAATGATGAAGTTTGACGAAAAAAGCCTCATGGAAAGCAGTTTGATAAGGAAAATGGAAGAATGTGATATTAAAAAGGTTGATATTGTAGATACGCCTGAAAAGGTCGAAGTTAAAAATGAACCAACCTTGCCAAAACCACAAACCACCGTCACTCACACACCAACGATTGACAGCAGCCATTTCTCAGAAGGTTCTAGCCCTGACAAGCAGACTCCACCGCCCCAATGTCTTTTTAAACCAATCGAACGAAAGACCATCTtcagaaaagaaaggaaaattcCGGTTCCCAACATCAATGCATTCTCGCCCAACAACGAAAGCAGCGTATACGCCTTTGAAGCAGATAATGAAGATGCCATCAGCACGCCATTCCGAAGACCCGTGCGAAGGCCATCGAGTACTGCAACTTCAAAATCAGAAGACTCTTCCAAATACGATGAATCCTCAAAGGGAACTGGGAAATTCCGAATACCGTCGTCCATTAAACAAGATTCAACCAAAATTGCAAATAAGCAAGAAGTTTCATTGATGCTATCTACGGACGAATCCAACAATAGTGCTTCTATTGCAGTTCAACTGGACATAGATTCAACGGATGTTTTCCCAAATCAAGCAGATACGGAAGATAGCGAACAGTTGTTTTATATTCCCCTACAACCAGGAAAGCAGTCATCCTTGCAGTTAATTCAGGGAGTTGCCGTAAAATTGGGGACGAAAGGCGCTAACGGTCCGAACCAGCGAGTGGTGATGAGCGCTAAATTAGTAACCCATACGCCAGTAGGTGCTCAGAAACTAACAGAAAAACCCATAGCGACCTCTACACCTATGTATCCGCCGTCGACGACAGTGCAAAAGTCTAAGAACACAGAAAGCTGCCCCAAAAGCAGTTTCGTAAAAAGCGGCAAGGCGTACGACCGCTCTTCGGAGAACTGCGACgactttaaatacaaaatccCCAGTTCACCCAGCGCTAGCTCGTCCTCTAGCACGAAGGTCACCAAGCGGCACCATTTCAAAACTAGGATTAGGCCGTTCGAGTACTTGAACCCCGTGCAGCTGAGCGATTTCCCTATCGCGGGGCACAACCCGGCGGCATTACTGGAGGCACCTGTCTTCCACCCTAACGAGAAGGAGTTCCAGGACCCGCTCGAGTACATAGAGAAGATCCGACCCCAGGCCGAGAAGTTCGGCATCTGCCGAATCGTGCCGCCCAGCAACTTCAAGCCCGAATGCAAAGTTTCCGATGACATGCGGTTCACCGCCTACAATCAGTACGTGCACAAGATGCTGCACCGCTGGGGGCCTAACTTCAAAGAGCTTATGGCCATCACGAAATACCTGGAGACGCAAAATATTGCTTTGACGCACCCGCCCTGGATCGGTGGCATGGAAATCGATCTTCCCCGCCTGTACCAAATAGTACAATCTCTGGGCGGCCTGAAGGAAGTCATCGAGaagaaaaagtggcccaaaGTCTCCGAACTAATGAAAATACCGAAGTCGGCTCAGGACCGCGTAACTAAGCTCGACGACATCTACTGCAAGTATCTCCTGCCATACGACACCCTTTCTCCAGATGAACGGGAAAAACTATTCGACGAAGTAGAAACCGAATGGGCAAAGCGGGAATCACGCGCACTGCTTCGATCACAGCAACAAATTGACAATCAAGACACGGCTCCATATTCGGAATCAGATTCAGAGGACGAATATGAAGAATGCATCGTGAAAGGGCGCAATATGGCTTTAAACGCATTCTACCGCATCGCTCGCAACACCATGAGCATGTGGTTTAAGACTATGGAACCCAATGCGCAAGAGGTAGAGCAAGAATTCTGGAAACATGTAACACTTAAACAGAATCACATATGTGTGCATTCCGGTTCTATCGATTCGGGCAACTGGGGATATGGCTTTGCTGTTTCAAAAAACAGTCCATTTGCCAGACATGCTTGGAACCTGAAGGTTTTCACTAACAACAGTAGCTCTGTCTTAAGATCAATGGGCCCTGTAATGGGTGTAACTGTACCTACACTTCATGTTGGCATGGTGTTCAGTGCTTGCTGCTGGTACAGAGACCCACACAGCCTGCCATGGATTGAGTACCTCCACACAGGCGGAAATAAAATATGGTATGGCATCCCTGATTCAATGAGCGAGTTGTTTCGATCAGTACTGGTCAAACTGGTTCCCAATTACTGTCGCAACAAGTCACTATGGCTGCCGTCTGACACAGCCATGGTTCCTCCTAGTCTATTAGTCGAAAACGGCGTTTCTCTCTGCCGCACAATACAAGAACCTGGGCAGTTCATAGTTGTATTCCCCAAAGCTTTCACTTCAAGCTTGTGCACTGGCTATGTTGTATCTGAGAGCGTGTACTTTGCGCCTGCCAGGTGGTTGAATACGGCGCAAAACGTGTTCGAGGAGCTGCGCAAGAACCGAGAGCCCTCCATGTTTTCCCTAGAGAAGCTACTTATTAGCATTGCATGTGATATCCGATCAAATGCGGATATTTTGAAGCAGATTGTACCTGCTATAGAGTCGCTCTGGGACAGGGAAGCGCTGTCTTGGAAGAAGCTGCAAGATCTTGGAGTAACAGAGAGGGAAAAGCTACCACTTCCCGAGGCTCCAATCAAGAAACGTAAAAGATTCCAAAATGACAGTGGCGATTACGAATGTGAAATCTGCTGTAAAAACCTCTTTGTTTCTTGGGTTACCGAATCTCAAGAAGGAATCTACTGCTTGGACCACGCCGTCGAATTCctcgaaaagaagaaaatctacaCGCAGAACTGCAAGCTCGTCTACACCTACACCATTGACGAGTTAAAGGGTCTAGTCGTGAAGGTCAAGGGCAACATTGAGGCAAAGCTGCAGAAGAAGACGGCTGGGAAGGGCACTTGA
Protein Sequence
MCAEVRVTRASRPLLSSIREQRVKRKIQISKSLPTKTPFVKLTPTKTYSPRLKQREEQAKQEKFKKPEKINKTVSIPEGDKPKREDIKKDSKVKPEKSEETVLTEKCTKRMSDRSLEMRRLLRNDATPTERDVKKKAPTSTAAVDKDNVKKKLRKFDTALEKPQKKNTEKANVSTEKDSKKKFDKSSEKKLSNPECIPEKESRKSTFATKLEVVQQKKTAEAAGEKKKTEKTESPDRKNSPDRKKIETLDAVEDKKNPDAPEPSYEKKKIDKVEPVVENKKSDKPELVSDKKKGERLDPIPIEKKKSEGSPEKKKSDKPETLVEKKKPVKAESVTEKKNTVKTEMHAIEEPRISQRPSRKTKEAAAIYMEILGHKLVNEEDIDDDNISIDSFPELPNVRKTEQRENELKAKATKSKISESADKSGLGIVNDDKTSPVKVKNSETETKSVQDNSVKKLKIAENSKNKVDIFSDSDSSLKKVKGKTKEVLLRKSDSNVDTAKRFTRASLQNKSSIDTSSSEAEDIEEEHAVTNKKQALKKLRDTTNSAPSKLENKKVGKSSIKTRSQVLGSNESDTSDNESTTSKRSQDQPKNLANNKKLIKMCSAKLDNSFSDSDEEPLSKFTQTKSKSDITEDYQVNQVEPVKDAQKNLLNRKSVETESTADSKTSSKRESITKCTKRDPSLQKVAKPQEKKESENEPLPPLINKPKRECTKKPQNYLTLFSSSEDEDKYFHGFVKSENARQKCIIQELQCHPPASSDLLCKDVDKRFGRGKVNMSTEQIEKWLKDSALAGSTVKKENFEMMKFDEKSLMESSLIRKMEECDIKKVDIVDTPEKVEVKNEPTLPKPQTTVTHTPTIDSSHFSEGSSPDKQTPPPQCLFKPIERKTIFRKERKIPVPNINAFSPNNESSVYAFEADNEDAISTPFRRPVRRPSSTATSKSEDSSKYDESSKGTGKFRIPSSIKQDSTKIANKQEVSLMLSTDESNNSASIAVQLDIDSTDVFPNQADTEDSEQLFYIPLQPGKQSSLQLIQGVAVKLGTKGANGPNQRVVMSAKLVTHTPVGAQKLTEKPIATSTPMYPPSTTVQKSKNTESCPKSSFVKSGKAYDRSSENCDDFKYKIPSSPSASSSSSTKVTKRHHFKTRIRPFEYLNPVQLSDFPIAGHNPAALLEAPVFHPNEKEFQDPLEYIEKIRPQAEKFGICRIVPPSNFKPECKVSDDMRFTAYNQYVHKMLHRWGPNFKELMAITKYLETQNIALTHPPWIGGMEIDLPRLYQIVQSLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPDEREKLFDEVETEWAKRESRALLRSQQQIDNQDTAPYSESDSEDEYEECIVKGRNMALNAFYRIARNTMSMWFKTMEPNAQEVEQEFWKHVTLKQNHICVHSGSIDSGNWGYGFAVSKNSPFARHAWNLKVFTNNSSSVLRSMGPVMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGNKIWYGIPDSMSELFRSVLVKLVPNYCRNKSLWLPSDTAMVPPSLLVENGVSLCRTIQEPGQFIVVFPKAFTSSLCTGYVVSESVYFAPARWLNTAQNVFEELRKNREPSMFSLEKLLISIACDIRSNADILKQIVPAIESLWDREALSWKKLQDLGVTEREKLPLPEAPIKKRKRFQNDSGDYECEICCKNLFVSWVTESQEGIYCLDHAVEFLEKKKIYTQNCKLVYTYTIDELKGLVVKVKGNIEAKLQKKTAGKGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-