Suni005511.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- stc
- Assembly
- GCA_963930825.1
- Location
- OZ005758.1:4079444-4082436[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.7 1.8e+04 -3.9 3.0 6 10 242 246 238 246 0.61 2 15 0.12 1.2e+03 -0.2 0.3 4 10 272 278 271 278 0.94 3 15 6.9e-06 0.07 13.4 13.1 4 18 287 301 285 302 0.93 4 15 8.2e-05 0.84 9.9 11.9 1 19 338 356 338 356 0.98 5 15 2 2.1e+04 -4.5 0.4 6 10 386 390 386 393 0.78 6 15 1e-05 0.11 12.8 10.9 1 18 396 413 396 414 0.94 7 15 1.6 1.7e+04 -3.8 0.4 6 10 444 448 444 449 0.90 8 15 1.8e-06 0.019 15.2 12.0 4 19 461 476 454 476 0.87 9 15 1.2 1.2e+04 -3.4 2.0 5 10 505 510 505 510 0.93 10 15 0.036 3.7e+02 1.5 12.3 1 11 516 526 516 538 0.90 11 15 1e-08 0.00011 22.4 16.9 1 18 543 560 543 561 0.97 12 15 0.0017 18 5.7 17.7 1 19 600 617 600 617 0.93 13 15 2 2.1e+04 -4.3 2.3 9 13 635 639 634 647 0.59 14 15 9.2e-05 0.94 9.7 12.8 1 18 653 675 653 676 0.89 15 15 7.4e-06 0.076 13.3 13.8 1 16 682 696 682 701 0.88
Sequence Information
- Coding Sequence
- ATGTCTTATAATTACGACGAAACTCActcatataataataataatcgttCTACGTCGTCGGTCAGTGAATACCAAGTGAGAAATTCCAGATTGGAACCAACGGCTCCAGAATTTCGACCAGCCACCGATGTTACATCAACTGGTGCAGTCAAAAAGAAGCCCCAAAATCAAAATCGTCGTTACAATCGATATGGGAGTGGTCGATTTTCAAATAATACCCGGCATGATGATAGAGAACTGGAGGATGGTGAAAGCAGCCGACAATCAAATAGCAATAGAAAGCAATATTATGAACCACGTCACAACTATTACGACCATCACAAATATCGAGAAGACAATTATCAAAACAATTACAAACCGAACAGAAGACAATATGATAAGTACGTGAAAAACGATGATTCGTATCAGAACAATGTTAGTGAAAATGGGAAACATTACAACAATCGTCGATACACAAATCAACCAAATTGGCGAAAGTTTAATGCAACGAACAAAGATAACCGACAGACGAAAGAGAATAAAAGGGTGAACGCAGCATCACAACGAGAACGTCTAGAAGACATGCTAAATCGTCGTCAATTAGAATGTCTTGTTTGCTGTGAAAAGATCAAAAACAACGACAAAGTCTGGTCCTGTACACAATGCTACAACATACTTCATTTAGATTGTACAGTTGCATGGGCGAAATCGTCTCAAATCGATAACGGATGGCGTTGTCCAGCGTGTCAAAATGTTTGCACCGAAGTTCCTCATGAATATCGATGTTactgtaataaaattattgaTCCAAAGCCCGATAATGGCGTTATAGCGCACAGTTGTGGTGAAATTTGTCTACGAAAAGGTCGTAACTGTGACCATAAGTGCACCATCCTATGTCACCCTGGACCATGTCCCGACTGCAACATAATGGTCTCAAAAGCATGCGCTTGTGGGGCCACACAATCACAATTAAAATGTTCCACCGATTTGGAACTGGTTTGTGATAATGTCTGTAATAAACTACTCAATTGCGGTTTACATCACTGCACCGACAAATGCCATTGGAGCGATTGTACACCCTGTTCGCAAACAATCCAACAGGAATGTTATTGTGGCAAAGTGGGAAGACGGGTTCAATGCACTGCCAATGTGAATGGTTCAGTAACGTATTCTTGCGGTGAAGTTTGTAACAAAGTATTATCCTGCAAGAATCACAAATGCACCAAGATTTGTCATGAAGATGAATGTGAACCGTGCATAAATGATGTTAGTTCGGTACGTACATGTCCATGTGGAAAGAAAGTATTAGAAGAGGAGCGAAAATCGTGCCTAGATCCGATCCCTTGCTGTGACAAAGTGTGTGGAaagtatttaaaatgtggcCAACCGAATAATCCGCATGTTTGTCAATCATTGTGTCATTTGGGGGATTGTCCTGTATGTCCGCAGAGCACTCTTGTACGATGCCGTTGCGGACATATGGATAAGGAATTGCCTTGTAAAGAGCTGGTCAGTAAGGCGGACGATGCTCGGTGTGAGAAAAAATGCACCAAGAAACGATTATGTGGCAAGCACAGATGCAATCAGCGTTGTTGCATCGAATTCGAACACATCTGTCCATTGCCATGCAATCATCAATTAACATGCGGCCAACATCGATGCCAATTAACTTGCCACCGTGGCCATTGTCCACCGTGTTTAGAAACGAGTTTTGAAGAATTGTATTGCGAATGTGGTTCCAGTGTGATTTATCCGCCAATACCGTGCGGCACTAAGCCGCCTGTTTGTAATAAATCGTGCATACGGCCACGTCCATGTGGACACGAACCGAATCACAGTTGCCATCCGGGGCCGTGTCCACCGTGTACGGTTCTTTGTAAACGTTGGTGTTATGGTAAACATGAACAACGATCCGCGGTGCCATGTCATCAGCAAGAGTTTAGTTGCGGGTTGCCTTGTGGTAAGGCGATGGCATGTGGCCGACATAAGTGTGTGAAAGCTTGTCATGCGGACGAATGTCCATTGCTCTGCAAACAGCCTTGCACAATTGCTAGACCACTTTGTGGACATCCATGTTTGAAACCGTGTCATGATGGACCGTGTCCGGAGAGTATTTGTCGATATACGGTGCCAGTTACATGTCCATGTGGTTTACAGAAATCTACACGACCGTGTCTTGAATTAACGGCAGAGTTTAGGAATATTGAAATGGCGAATTTGAAAGATAAAATGGGGGATTTGAGTAAAGGGATAACAGTTGATTTAAGTgatgttattaaaattaataaaccaACGGTTTTGAAAGtATTGGAGTGTACAGATGAATGTAAAATTTTGGAACGTAATCGTAGACTGGCGATTGGTCTACAAATTCGAAATCCTGATTTAAGTCAGAAATTGACACCACGTTATACTGATTTTATGCGTACGTGGGCGAAAAAGGATCCACATTTTTGTAGTCGTGTACATGAGAAATTGAGCGAATTGGTACAACTTGCGAAACAAAGTAAACAAGCGAGTCGTTCATATTCGTTTGAGTCAATGAATCGAGATAAAAGACATTTTGTGCACGAATATTGTGAACATTTTGGCTGTGAGAGTGTTGCGTATGATAGTGAACCGAATCGAAATGTAGTCGCAACGGCCAATAGGGATAAGTCTTGGTTACCGAGCATGAGTTTGTTGGAGGTGATTCAGAGGGAGAATGGTCAACGGAAAGTGCCTGGACCAATATTAAATAAGAATTCAACTAGCAAATCTGAGCCAGTGTCGTTGAAATTGTCTAGTAGGAATTTAACAAGAGCACCGCCTGGCGAAATGGAGTACTTCGATTGA
- Protein Sequence
- MSYNYDETHSYNNNNRSTSSVSEYQVRNSRLEPTAPEFRPATDVTSTGAVKKKPQNQNRRYNRYGSGRFSNNTRHDDRELEDGESSRQSNSNRKQYYEPRHNYYDHHKYREDNYQNNYKPNRRQYDKYVKNDDSYQNNVSENGKHYNNRRYTNQPNWRKFNATNKDNRQTKENKRVNAASQRERLEDMLNRRQLECLVCCEKIKNNDKVWSCTQCYNILHLDCTVAWAKSSQIDNGWRCPACQNVCTEVPHEYRCYCNKIIDPKPDNGVIAHSCGEICLRKGRNCDHKCTILCHPGPCPDCNIMVSKACACGATQSQLKCSTDLELVCDNVCNKLLNCGLHHCTDKCHWSDCTPCSQTIQQECYCGKVGRRVQCTANVNGSVTYSCGEVCNKVLSCKNHKCTKICHEDECEPCINDVSSVRTCPCGKKVLEEERKSCLDPIPCCDKVCGKYLKCGQPNNPHVCQSLCHLGDCPVCPQSTLVRCRCGHMDKELPCKELVSKADDARCEKKCTKKRLCGKHRCNQRCCIEFEHICPLPCNHQLTCGQHRCQLTCHRGHCPPCLETSFEELYCECGSSVIYPPIPCGTKPPVCNKSCIRPRPCGHEPNHSCHPGPCPPCTVLCKRWCYGKHEQRSAVPCHQQEFSCGLPCGKAMACGRHKCVKACHADECPLLCKQPCTIARPLCGHPCLKPCHDGPCPESICRYTVPVTCPCGLQKSTRPCLELTAEFRNIEMANLKDKMGDLSKGITVDLSDVIKINKPTVLKVLECTDECKILERNRRLAIGLQIRNPDLSQKLTPRYTDFMRTWAKKDPHFCSRVHEKLSELVQLAKQSKQASRSYSFESMNRDKRHFVHEYCEHFGCESVAYDSEPNRNVVATANRDKSWLPSMSLLEVIQRENGQRKVPGPILNKNSTSKSEPVSLKLSSRNLTRAPPGEMEYFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -