Suni013823.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963930825.1
- Location
- OZ005761.1:1971548-1974483[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.1e+04 -7.8 5.6 15 19 155 159 154 159 0.81 2 18 0.13 1.3e+03 -0.3 0.4 4 10 190 196 189 196 0.95 3 18 3e-08 0.00031 20.9 17.0 1 19 204 221 204 221 0.99 4 18 1.9e-09 1.9e-05 24.7 13.9 1 19 257 275 257 275 0.99 5 18 0.69 7.1e+03 -2.6 1.9 6 10 300 304 299 304 0.90 6 18 0.0012 12 6.2 15.1 1 18 310 327 310 328 0.96 7 18 0.91 9.3e+03 -3.0 0.9 5 10 352 357 352 357 0.93 8 18 8.5e-06 0.087 13.1 13.2 1 18 363 380 363 381 0.97 9 18 0.0007 7.2 6.9 14.9 1 18 415 432 415 433 0.94 10 18 2.5e-08 0.00025 21.2 13.7 1 18 442 459 435 460 0.90 11 18 0.7 7.2e+03 -2.7 0.8 5 10 488 493 488 493 0.93 12 18 0.00085 8.7 6.7 4.2 10 19 509 518 506 518 0.90 13 18 0.041 4.2e+02 1.3 4.7 1 12 528 538 528 538 0.89 14 18 0.19 2e+03 -0.9 0.5 6 10 597 601 596 602 0.85 15 18 0.00036 3.7 7.9 5.3 1 11 607 617 607 618 0.94 16 18 2 2.1e+04 -6.0 3.6 6 10 635 639 632 639 0.80 17 18 0.0012 12 6.2 18.6 3 19 648 664 647 664 0.94 18 18 1.3e-06 0.014 15.6 10.2 1 16 707 721 707 727 0.93
Sequence Information
- Coding Sequence
- ATGAACAGCAGATCAAAACAGACAAACCCCTGGAATAAAAATAAGCCACCAAAAACTTCAAACAGTAATGGAGAAATCAAATTTAAAGAAGCTCAAACAAAATTGCATGCTGCAGTTCAAAAACATGTAAAGGACTACGATTCCTCTTCAGAGGAGGAAGATATTCTAGAATCTAGTGGATATATAGATAACATTTTAAAGAAATATACCGACTCTGGAGGCAGAAATGAACAACTTGGACGTACCCACAAAATTCTAGAAGACAGTTTTAAATCAGGAGCAGCAACTTGTTTAATTTGTATATCAAAAGTAAAACGCAACGATGAGATTTGGAGTTGCACCAGTTGTTATGCTTACTTTCACCTCCTTTGTATTCAACGTTGGTCCAAAGACACCATCACCCAACAAAAACTAGCACTAGAAGCCCCAGTCGTTCTTAAACCAAGAAAAATAAACTGGTGCTGTCCAAAATGCCGATTTGAATTCGATCCAGTCGATGTTCCTACAAAATACAATTGCTTTTGCGGTAAAACCACAAATCCAAAATTCCAACCGTTCCTTATACCCCATTCATGTGGAGAAATATGCACTAAAGATCTAGTACCCAAATGTGGACACAAATGTTTGCTACTCTGCCATCCTGGCCCATGCCCTCCTTGTCCTGTAGTTGTAAAAGTAACATGTTACTGCGGATCACAATCACCAACGGCCCAACGATGCAGCAGTAAGGAATGGAGCTGTGAAAATCAGTGTAATAAGCCCCTTAAATGTGGCAAACATCGATGCTCCGACATTTGCCATTCGGGCGAATGTAATCCATGTCCAAAAAAGAGTATACAAAAATGTTTGTGTAAATCGGAGCAGAAATTACGCGATTGCGCCTCGCCAGTTTGGCAATGCGAAAAAGTTTGCAAAAAGCCTTTGGAATGTGGTCATCACCAATGTGAAATCGTTTGTCATGACAATGGATGTGGGAAATGTGCTTTAACTCAACCAAGAAAATGTCCTTGTGGTAGTACAAACTATCAATTGCCTTGTACAGAAGAAACACCAACATGTAATGACACTTGCAACAAGTTATTGGATTGCGGCACTCACAGATGCAATCAAAGATGTCACAAAGACAAATGTGGTCAATGTTTGGAAACAGTGCAGAAATCATGCCGCTGTGGCCTTCATGTGAAAGAAGTTCAATGTAGCAAACCGTATTTGTGTGAAACGAAATGTAAGAATATGAAAGACTGCAACAAACATCCTTGCAATAGAAAATGTTGTGATGGGAATTGTTCAACGTGTGAAAAACCATGTGGACGCACTTTAAATTGCAACAATCATAAATGCACTTCAGTTTGCCATCGTGGCCCTTGTTATCCGTGTAATCAAACTGAAACAGTTGCATGTCGGTGTGGAACGACGAAAATTCAAGTACCTTGTGGCCGTAAACATAAAACGAGACCACCAAAGTGCGATAAACTTTGTTTGATCCCTCCTGACTGCCATCATAAACAAAGAGAGGCACATAGATGCCATTTTGGTGATTGTCCAAAATGCAAACAAATTTGTAATAAACCTTTAGCGAATTGTTCACATGTATGTCCTTTGCCATGCCATTCGGCTGTGCTAGTAAAAATTGAAACGGAAAAAGCGTCTATGCCTTGGGAACAAACCAAACCGCAAGTTGAGCGTAAAGAATTGCCTTGTGCTGATTGTAAAGTTCCTATAATGGTTACTTGTTTGGGGGGACACGAAACTGCGAGCTTTCCATGTTATTTAGCGAAACCATCCAGTTGTCAGAGACCTTGTGGACGAGTTTTAGCTTGTACGAATCATACATGTACGTTTGTGTGTCAtcaagtggattcagcacccgATAATAAAATGGCGGGGGACAATTGTGAAGTTTGTGAAAATCCCTGTTCGAAACCAAGACCGGACGGATGCCAACATTCCTGTCCAAAACCTTGTCATCCTAAAAATTGTCCCCCTTGTACCCAATTACTGAGAATTCGATGCCATTGTGGCCTAACACAGCCTTACATTGAATGCAATAAGTGGTTGAATGTTGAAGAGAGAGAACAGTTGCAGAGCTGTGCAAATCAGTGTCCAAAAAATTATCCGTGTGGTCATCGTTGTAAAGCGAATTGTCATTCAGGCGAATGTCCAAATGCCGATTTATGCAAGAAGAAAGTCAAAGTTGCATGTAAATGCAAACGAATTAAGAAGGATTTTTCATGCGATTTGGTTCGTAATAAAAAAGCGTTGGTGGAATGTGATGAAATATGCGACAAGAAAAAGGCGGAAGAGCGACAACTAAGAGAGGCAGCCAATGAAGAGAAACAGCGGTTGGAGGAATTGAAGAATAAAAAAGAACTGGAGAAATACCAGAAATTGTTCGAaggaaagaaaaaacaaagagATCGAAGACAATATGACGAAGAGGAGGAAGTTGGTTTTATTTACAGATACAAAGTGGCTATAATGTCATCAATCATATTTATAATTGCTATGATTTTGTATTTCGTATTGAATTTGTAA
- Protein Sequence
- MNSRSKQTNPWNKNKPPKTSNSNGEIKFKEAQTKLHAAVQKHVKDYDSSSEEEDILESSGYIDNILKKYTDSGGRNEQLGRTHKILEDSFKSGAATCLICISKVKRNDEIWSCTSCYAYFHLLCIQRWSKDTITQQKLALEAPVVLKPRKINWCCPKCRFEFDPVDVPTKYNCFCGKTTNPKFQPFLIPHSCGEICTKDLVPKCGHKCLLLCHPGPCPPCPVVVKVTCYCGSQSPTAQRCSSKEWSCENQCNKPLKCGKHRCSDICHSGECNPCPKKSIQKCLCKSEQKLRDCASPVWQCEKVCKKPLECGHHQCEIVCHDNGCGKCALTQPRKCPCGSTNYQLPCTEETPTCNDTCNKLLDCGTHRCNQRCHKDKCGQCLETVQKSCRCGLHVKEVQCSKPYLCETKCKNMKDCNKHPCNRKCCDGNCSTCEKPCGRTLNCNNHKCTSVCHRGPCYPCNQTETVACRCGTTKIQVPCGRKHKTRPPKCDKLCLIPPDCHHKQREAHRCHFGDCPKCKQICNKPLANCSHVCPLPCHSAVLVKIETEKASMPWEQTKPQVERKELPCADCKVPIMVTCLGGHETASFPCYLAKPSSCQRPCGRVLACTNHTCTFVCHQVDSAPDNKMAGDNCEVCENPCSKPRPDGCQHSCPKPCHPKNCPPCTQLLRIRCHCGLTQPYIECNKWLNVEEREQLQSCANQCPKNYPCGHRCKANCHSGECPNADLCKKKVKVACKCKRIKKDFSCDLVRNKKALVECDEICDKKKAEERQLREAANEEKQRLEELKNKKELEKYQKLFEGKKKQRDRRQYDEEEEVGFIYRYKVAIMSSIIFIIAMILYFVLNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -