Basic Information

Insect: Silvanus unidentatus
Gene Symbol: -
Assembly: GCA_963930825.1
Location: OZ005757.1:30034249-30043655[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.4 3.3e+02 2.2 0.5 3 23 340 362 340 362 0.86

2 15 0.52 51 4.8 4.0 1 22 465 486 465 489 0.90

3 15 2.9 2.9e+02 2.4 2.3 1 22 500 521 500 524 0.90

4 15 6.7e-05 0.0066 17.0 2.2 1 23 581 604 581 604 0.97

5 15 1.4 1.4e+02 3.4 0.2 1 22 609 630 609 633 0.87

6 15 0.16 16 6.4 1.0 2 23 648 670 647 670 0.96

7 15 0.0001 0.01 16.5 0.1 2 21 676 695 676 696 0.95

8 15 1.7 1.7e+02 3.1 4.2 1 23 710 732 710 732 0.96

9 15 0.00032 0.032 14.9 1.8 1 23 750 771 750 771 0.98

10 15 0.00025 0.025 15.2 1.1 1 23 777 799 777 799 0.98

11 15 0.0052 0.51 11.1 0.7 1 23 817 839 817 839 0.95

12 15 0.55 54 4.7 1.8 1 23 844 868 844 868 0.97

13 15 0.0013 0.13 13.0 4.0 1 23 874 896 874 896 0.98

14 15 0.00047 0.046 14.4 3.8 1 23 902 924 902 924 0.99

15 15 0.0054 0.53 11.0 2.4 1 22 930 951 930 955 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.4	3.3e+02	2.2	0.5	3	23	340	362	340	362	0.86
2	15	0.52	51	4.8	4.0	1	22	465	486	465	489	0.90
3	15	2.9	2.9e+02	2.4	2.3	1	22	500	521	500	524	0.90
4	15	6.7e-05	0.0066	17.0	2.2	1	23	581	604	581	604	0.97
5	15	1.4	1.4e+02	3.4	0.2	1	22	609	630	609	633	0.87
6	15	0.16	16	6.4	1.0	2	23	648	670	647	670	0.96
7	15	0.0001	0.01	16.5	0.1	2	21	676	695	676	696	0.95
8	15	1.7	1.7e+02	3.1	4.2	1	23	710	732	710	732	0.96
9	15	0.00032	0.032	14.9	1.8	1	23	750	771	750	771	0.98
10	15	0.00025	0.025	15.2	1.1	1	23	777	799	777	799	0.98
11	15	0.0052	0.51	11.1	0.7	1	23	817	839	817	839	0.95
12	15	0.55	54	4.7	1.8	1	23	844	868	844	868	0.97
13	15	0.0013	0.13	13.0	4.0	1	23	874	896	874	896	0.98
14	15	0.00047	0.046	14.4	3.8	1	23	902	924	902	924	0.99
15	15	0.0054	0.53	11.0	2.4	1	22	930	951	930	955	0.93

Sequence Information

Coding Sequence: ATGATTGGAGACTACGATGACGATACGCATATCTGCTTAAAATGCCATTCGACCATCATTGGATTAGACAATTATGTGAATCACAGAAAAACAGGATGTAGTAAGATTATTGTGGAGACATCAAAGTCTCCCAGTCAGATTTTACGAACTGATGAGTCACTCGGTTTGAAAGCGGACGATTTTTTCTCGTCGTTGGAGTTACAGAGTAGTGCTAAGAAAACTGCGCTTCCTTCCACTTCCGGGAAACAGTTTAGTGGTATTTTGACAAGGAGTAAAGTTGCTGTGATTCAAGCGTCAAACAAGGATATTCCAGTGGAAAAAAGTGATGAACCAAAACGGAAAGAGTTAGAAGAGTATCAAGAGAGTGATGATGATTTGGAGGAGTATTACTATGAGGAGTATGAAGATGAGTTTTCGGATGAATATGCACCTCCAAGGAACTATACGGGTGGTAAATGGAAACCGACGTCACCGATTCATTTTGAAGAGTGGGCAGAACCTCCGCCGACACATACCGGAGGGAAATGGAAGCCGAAAAGGACGGCAAAGGACGAGTTCGATGCTCCACCACCAACACatacaaaaggaaaatggaaaCCGAGGAATTTCTTAGAAGAAGAGGCAGAATCTGATCATAATGCACCACCTGCAAATCATACGAAGGGAAAGTGGAAACCTAGAGAGGAAGAACAGGATGTTCCTCCTCCTAGTCATACGAAAGGTAAGTGGAAGCCGAAAAGTAATGAAGAAGAAGGTTTAGTTCCGCCACCGAATTACACAAAAGGCAAATGGAAACCGAAAAATGAAGAACCATCAGAAGtgaatttaaaatcaaaacaAACTAAAGTGAAGAGTAAAAATAAACAAGGGGAGGACAGTAAGAAAAGTAAAGATGATAGTAAAGTAAAATCCGAGGAAATCAGACAGAAACAACTTTATACGAAAGTGAAATGGACCGAAAGTCAGCCGATCAAAGTGACAGCTCTTCAAAAATCCTCCGGAACCATCCAATACTGGTGCAGTCCATGTAACCGGCGTCTTTCTTCAAAAGTCGTCTACGAAAGACACTTAAAATCCGAACTCCACTTCAAACGCACCTCCCAAGAGCGTGAATTCGACGATGGTGCTGATTTAAATTTGTCCAAACGCAGTTTAAGCAAACCTCCGGAACCAATTTTCAGTGAGaacaaaaaagaaacttgggAATCGAAGAAGAAACGTAAAAGGAAGAAAGTATACGAAAGATGCGGTGTATGTCAGTCGAAAGTGAACAAACACCTACTCGGTAAACATTTAATCTCGCATTACCATTGTCGAAAAGGGAATATTAACTCGTCTCTAGCGAAATCAATGGTATTAGACAACATTTTCGGCATTGTACTGCACAGTCCATTCCAATGCAGTGTTTGCCGTTTTTATTGTAACACACATGACGATTTCATCAAACATTGGCTTTCAGAGATgcataaaaaaaatgaatctaCATTAAAAGGCTTCTATATGTGCTCGTTCTGTAAGTTTCAGTGCGAAACTAGCAACGACATGTATATACATTTGATATCCAATGAACATAAAGATGTAGTAGCGGTAATAAATCGATCAGTACCGATAATTGTACAGAAAATACAGCCAATTTACTGCATAACATGTAAAGCACGGTTTTCATTAAATATCGAACTATTGAATCATTGCAGGAAATTTAATCATGATACAAGAAACGtacaattgaataaaactaaGTACGAATGTAGGGAATGTAAACAAGTTTTTGTGAAAAACGTTTCGTTGCAACGGCACCACAGGAACGTCCATAAAAAGAATTATTTCATTTGTTCAGTGTGTAGTTTGGAGTTTGATGACATTGAAAAAGCGAAAAATCACAGGAGTTCGAATTTGCATCGCATCAATTTGTGTAAATTGAGGGAGATTGATACGAAAAAGAAGTGCGACTATTGCGATCAAATACTAGACAATTTTCTCGAGTACAAACAACATTTGCAGAAGAACCACGAGGGCTATTTGCCTCGCTGTCCGCATTGTGGCAAGATTTTCAATGTGCCTCAAGAGTTATCAGTCCATTTACGTAACAAGGCTTGCAATTTTAAGAATTTCACAAAAGACTCGATACATAAATGCGACAAGTGTCTTTTTTCGTGCGACTCCCTGTCCGAGTATCTCTACCATCAAGCGTTGCACGAAGAGCCGCAAATAATTCACTCTTTCGATAGTAAAAAGTCGTCAGTGCAGTACAAGTGCAGTTTATGTCAGAAATACTTTCCTAAATCTTCATTGCAGGCACATCTGCGACAGCATACAAATGAAAAACCATTTGTATGTCGATTATGTAATGTGTCATTTGCTagaaaaaacaattggaaGACACACGAACGTAACCATGAGAAGAAAGAAGCGAAAGTAAAAGTGAAATTGGCGATTGGTAGTCGACCGTTTTTATGTTCAACGTGCGGCGCGAATTTTATGAAAAAgTCGATTCTGAAGCAACACATGCAAGTCCATACTGGGAAATTGTTCAAATGCGACCATCCAGGATGCGTTCACACCGCTAGGAAGATGAGCGAATTGAGGGCGCATTATGTAACCCATTCAGATATAAGAAGTTACTCTTGTTCTCTGTGCGAGTACAAAGGCAAAACAAAGAAACATTTGACAAGACATCAAAGTGTCCATGAGCCAGAGAAAAAGTACAAGTGCGATAAGTGTGCGTTCACTTCACGAAATTCGTGGCATTTAAAGCGCCATTTACGGTTGCACATTGGCAGCAAACCGTACAGTTGTCCGTATTGTTCGTACACTTGCAATACGATGGAAAACATCCGCAAACACATCCTAATGACGAACAAACATCCCGGCAAATGTGTATATGAATGCAAATTCTGCACTAATACGACAACAGGCCGCTACCAAAGTAACTTTGCTATTGAATTTAAGGCCCATTTGGTCAACCAACATGGTGACATGTTTGCAAATGTAACGGCTGCCCTAACATACATTACGGGCATTTATGAGCCTCAAGAGGAGGACACTTCCATGTTTATAAATGTACAATCGGACGAGGATAGTAACACATCGAATACTGGCCATATAATCCACCATCATCAGGTGGAGGAGAGTATAATGTCTTTGCACGCGAATAACGATCCGATTGTCGCACAATTGGAGGAACCTTCAACGTCCTCCACTTCCGTGGCGACTGTAATTAAAGAGGGCAATTTCGATGAAACGTTACCGCTGTTTGTTATTTCAAAAGATGAGATTATTAGTGGTGACAATCAAACGGATACATGGAATTTAGTTGGTAGATACGATGTGGAGGAGTCTGGTACATTGGTGCCGTTCCAAAGTGATGGGGAGACGTTGTTCCAAGAGCATTTCCAATAA
Protein Sequence: MIGDYDDDTHICLKCHSTIIGLDNYVNHRKTGCSKIIVETSKSPSQILRTDESLGLKADDFFSSLELQSSAKKTALPSTSGKQFSGILTRSKVAVIQASNKDIPVEKSDEPKRKELEEYQESDDDLEEYYYEEYEDEFSDEYAPPRNYTGGKWKPTSPIHFEEWAEPPPTHTGGKWKPKRTAKDEFDAPPPTHTKGKWKPRNFLEEEAESDHNAPPANHTKGKWKPREEEQDVPPPSHTKGKWKPKSNEEEGLVPPPNYTKGKWKPKNEEPSEVNLKSKQTKVKSKNKQGEDSKKSKDDSKVKSEEIRQKQLYTKVKWTESQPIKVTALQKSSGTIQYWCSPCNRRLSSKVVYERHLKSELHFKRTSQEREFDDGADLNLSKRSLSKPPEPIFSENKKETWESKKKRKRKKVYERCGVCQSKVNKHLLGKHLISHYHCRKGNINSSLAKSMVLDNIFGIVLHSPFQCSVCRFYCNTHDDFIKHWLSEMHKKNESTLKGFYMCSFCKFQCETSNDMYIHLISNEHKDVVAVINRSVPIIVQKIQPIYCITCKARFSLNIELLNHCRKFNHDTRNVQLNKTKYECRECKQVFVKNVSLQRHHRNVHKKNYFICSVCSLEFDDIEKAKNHRSSNLHRINLCKLREIDTKKKCDYCDQILDNFLEYKQHLQKNHEGYLPRCPHCGKIFNVPQELSVHLRNKACNFKNFTKDSIHKCDKCLFSCDSLSEYLYHQALHEEPQIIHSFDSKKSSVQYKCSLCQKYFPKSSLQAHLRQHTNEKPFVCRLCNVSFARKNNWKTHERNHEKKEAKVKVKLAIGSRPFLCSTCGANFMKKSILKQHMQVHTGKLFKCDHPGCVHTARKMSELRAHYVTHSDIRSYSCSLCEYKGKTKKHLTRHQSVHEPEKKYKCDKCAFTSRNSWHLKRHLRLHIGSKPYSCPYCSYTCNTMENIRKHILMTNKHPGKCVYECKFCTNTTTGRYQSNFAIEFKAHLVNQHGDMFANVTAALTYITGIYEPQEEDTSMFINVQSDEDSNTSNTGHIIHHHQVEESIMSLHANNDPIVAQLEEPSTSSTSVATVIKEGNFDETLPLFVISKDEIISGDNQTDTWNLVGRYDVEESGTLVPFQSDGETLFQEHFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -