Basic Information

Insect: Silvanus unidentatus
Gene Symbol: Prdm15
Assembly: GCA_963930825.1
Location: OZ005758.1:4933662-4936209[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.7 2.7e+02 2.5 0.5 2 23 217 238 216 238 0.91

2 11 0.00019 0.019 15.6 0.8 2 23 246 268 245 268 0.94

3 11 0.0066 0.66 10.7 0.4 3 23 339 359 337 359 0.96

4 11 0.017 1.7 9.5 5.2 1 20 363 382 363 384 0.93

5 11 0.012 1.2 10.0 8.3 1 23 390 413 390 420 0.95

6 11 1.8 1.8e+02 3.1 4.1 2 19 418 435 417 438 0.87

7 11 6.6e-07 6.5e-05 23.3 3.2 1 23 448 470 448 470 0.99

8 11 0.0014 0.14 12.9 5.8 3 23 482 503 481 503 0.98

9 11 4.6e-06 0.00046 20.7 1.3 3 23 532 552 530 552 0.97

10 11 0.00017 0.017 15.7 2.2 1 23 558 581 558 581 0.96

11 11 8.4e-05 0.0083 16.7 1.4 1 23 595 618 595 618 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.7	2.7e+02	2.5	0.5	2	23	217	238	216	238	0.91
2	11	0.00019	0.019	15.6	0.8	2	23	246	268	245	268	0.94
3	11	0.0066	0.66	10.7	0.4	3	23	339	359	337	359	0.96
4	11	0.017	1.7	9.5	5.2	1	20	363	382	363	384	0.93
5	11	0.012	1.2	10.0	8.3	1	23	390	413	390	420	0.95
6	11	1.8	1.8e+02	3.1	4.1	2	19	418	435	417	438	0.87
7	11	6.6e-07	6.5e-05	23.3	3.2	1	23	448	470	448	470	0.99
8	11	0.0014	0.14	12.9	5.8	3	23	482	503	481	503	0.98
9	11	4.6e-06	0.00046	20.7	1.3	3	23	532	552	530	552	0.97
10	11	0.00017	0.017	15.7	2.2	1	23	558	581	558	581	0.96
11	11	8.4e-05	0.0083	16.7	1.4	1	23	595	618	595	618	0.98

Sequence Information

Coding Sequence: ATGATTGGTGCAGAAATTGAAATTAAGGATGAACAACAAGATGAAGAAATAAATACAGAAGCTAGTTGTGGAATTTGTGGCAAAAATCATCTCGTAACAAATTGTACTTTACTTCCAATAAAATATCATGTTTACCATAATGAAATCCCATCAAAAGCTCAATTAACATTACCTACTTTTTTGAAAGTTAAAAAACTAGCAGACAGTACTTTTGATGTAATAACTGAAGAACCAATCAAAAAGGGAACACAATTTGGTCCATTTGAAGCCCTAAGGACATTGTCCATGAAACCCAGTAtcaattttccattaaaagTATTTGTATCACAAGAAGAAGAGTTCAGTGAGTACTTCTTAGACACAACAAATGAAAATGAATGTAATTGGATGATATTTATTAGTGCCGCTAGTGAATTAAAAGAACAAAATTTAATCTGTTATCAGAATCAAAATGAAGTGTACTACAGCTCAATTCGTGATATACAGGAAGGTGAGTCTCTAAAAGTTTGGTACTCACCTCATTATGCGAACAAAATGGGCAAAAATGTACTCGTCTCTCCAAAAATAGAAGATCCACCAGACTTTTACTTAACAAACTTGAATTATTTAGTACAGAAACAACAAAATGTAATTAGTAGATATATTTGGAATTGTAAATTATGCGAAAAAGTTGAATGTGACGTCGTTTTATTCGCGAGACATCTGTTGAATCATTACGAAATGAAACTTAAGAAAGTTTGCGAAATATGCAAGGAAACATTCagaaataaactgCTATTGaacaaacataataaaatagtCCATGGAATTAGCAAAACGGAAATTGAGGATGATGTGATAAAAGAGAACGATTTTGGAGGCCCCTTGTTGAATAGTAGCACCGGTGACAATTTTCTTTTACAGCAAACAGATGAGAATAGTTTCAATAGCATTGAAAATGGTAACTTTCTAAGGGGAAATGATGAGAATTTGTATAATTTCGATATAAATGACGGCCAAAACGAGAAAATAATCTGTGATATATGTTTAAAAGAGTATACAAAGTTGAAATTTTTAGTGcaacatttaaaaatgcacACTGGACAATTTTATTGTGAACAGTGTAATAAAATATTTTGTCGTAATGAGACTTTTTTAAATCATGGATGTCGTGAAAATTTAACCACCTTTCAATGCAGTTACTGCaacaaaatgttttatttaaaaaagtatCTAAATCAGCATGTATTAGCTAAACATCTAAAACGACATCATTGTATTAAATGTAAGAAATTTTATGCTACCAAATTTGAATTGGTCAAACATAACTGCATGAAAGTGCCAGCGACTGAAAAGAAGCAATacaaatgtaaaatatgtGATAAAGTTTTTTACCGAGAAAAATATTTGAGAGAGCACCAAAAGCGACATCAAAATAATACTCAACAAAAGATGAAGGTGTTGTGTGAGATTTGTTCGTTAAAGTGCTGTTCGAAGAGTTCGTTGAGGAGGCATTTGAGAAGAATTCATGGAAAACCGATGGGCGGTTCATGTAAGAACAAGGATGACAAAACCGGCACTTCCGTGATCAAAAAGAAAACAGAAACGATTGATTGTCCGATTTGCAAAAAAACATTAAAGtccaaaaaaaatttaaaaaatcatttgCAATCACATTCCACTGAGAAGAAGTACACATGTCCTTTATGTTTTTTATCGTTTAAATATCAAGCGAGTTTATTAAAGCACAAGAAAAATAGACATTCCATAAATGCCGCGATCAAAGTAATCGAAGGTGAATTTTATAGTTGTCCGAAATGCGATAAATCAATGAAGTTTCGTGGTTCTTTAAGTAGACATTTAAAACGTGTTCATAACGAATATTACAAAGAAATGATaataagaaaaacaaaatCGAAATTAATCCCAAAAACCGAACAAAATGAATTACATCTAATAGACAGTATTGAAAATATCGATTTCAGTAATATGGGAACTAGTCACGATCTAAATATTGAGGACATGTTGAATAATACCACAAATTTAGATAATTTCCTGGTTGATCAAAGTAATGACAAAATTGTGGAGAACTTATTAAACGATATTGGAAAAGATAATCAAAGTTTGGAGCGTGAAGTTTGTTTATCAATGCCGGATTTAATGGAGAATGATCAAGAAATTCAGTTAGGAGAGAATGCTTACATTTTGGACAATGGTACCATAGTAGAGCCACAAGAAAACTCGGATAATGTTGTAATTTATTTGCTGAATCAGAAATTCTAG
Protein Sequence: MIGAEIEIKDEQQDEEINTEASCGICGKNHLVTNCTLLPIKYHVYHNEIPSKAQLTLPTFLKVKKLADSTFDVITEEPIKKGTQFGPFEALRTLSMKPSINFPLKVFVSQEEEFSEYFLDTTNENECNWMIFISAASELKEQNLICYQNQNEVYYSSIRDIQEGESLKVWYSPHYANKMGKNVLVSPKIEDPPDFYLTNLNYLVQKQQNVISRYIWNCKLCEKVECDVVLFARHLLNHYEMKLKKVCEICKETFRNKLLLNKHNKIVHGISKTEIEDDVIKENDFGGPLLNSSTGDNFLLQQTDENSFNSIENGNFLRGNDENLYNFDINDGQNEKIICDICLKEYTKLKFLVQHLKMHTGQFYCEQCNKIFCRNETFLNHGCRENLTTFQCSYCNKMFYLKKYLNQHVLAKHLKRHHCIKCKKFYATKFELVKHNCMKVPATEKKQYKCKICDKVFYREKYLREHQKRHQNNTQQKMKVLCEICSLKCCSKSSLRRHLRRIHGKPMGGSCKNKDDKTGTSVIKKKTETIDCPICKKTLKSKKNLKNHLQSHSTEKKYTCPLCFLSFKYQASLLKHKKNRHSINAAIKVIEGEFYSCPKCDKSMKFRGSLSRHLKRVHNEYYKEMIIRKTKSKLIPKTEQNELHLIDSIENIDFSNMGTSHDLNIEDMLNNTTNLDNFLVDQSNDKIVENLLNDIGKDNQSLEREVCLSMPDLMENDQEIQLGENAYILDNGTIVEPQENSDNVVIYLLNQKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -