Basic Information

Insect: Silvanus unidentatus
Gene Symbol: -
Assembly: GCA_963930825.1
Location: OZ005760.1:20592115-20608888[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.4e-05 0.0014 19.1 4.5 1 23 110 132 110 132 0.98

2 7 8.9e-06 0.00088 19.8 5.2 1 23 138 160 138 160 0.98

3 7 1.6e-07 1.6e-05 25.3 0.9 1 23 166 190 166 190 0.99

4 7 8.4e-06 0.00083 19.9 1.3 1 22 202 223 202 226 0.90

5 7 0.16 16 6.4 1.5 2 23 245 267 244 267 0.92

6 7 0.00017 0.017 15.7 2.2 1 20 284 303 284 306 0.94

7 7 0.0014 0.14 12.8 0.0 2 20 320 338 319 340 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.4e-05	0.0014	19.1	4.5	1	23	110	132	110	132	0.98
2	7	8.9e-06	0.00088	19.8	5.2	1	23	138	160	138	160	0.98
3	7	1.6e-07	1.6e-05	25.3	0.9	1	23	166	190	166	190	0.99
4	7	8.4e-06	0.00083	19.9	1.3	1	22	202	223	202	226	0.90
5	7	0.16	16	6.4	1.5	2	23	245	267	244	267	0.92
6	7	0.00017	0.017	15.7	2.2	1	20	284	303	284	306	0.94
7	7	0.0014	0.14	12.8	0.0	2	20	320	338	319	340	0.93

Sequence Information

Coding Sequence: ATGTACGAGGATGGTTTTAACGAAATTCGTGCTACCACCTCCACgacaacaataacaacaacatCAACGACAGCAATTGACAATATAAGTAACATTCATACATGGACGACAACATCAACACCTATGTATTCCACAAGTCACATGTCAATCCCTTACACGACCTTTGACCCTGGCCCTAGCACCTCGAATGTGTATTCACAGCCGTCCATGTTCCCATTTCCGCCTTATCCCGGCGTTCACGTGCCCTTCGACTACCCCCAGATATTTATGCACAAATCTGCGATGCAAATCCATGCCAGAGAATTGGGCAGGACCGAAGTGAAACCGCATCAATGCCAACAGTGTCTGAAGTCGTTTAGCAGTAATCATCAATTGGTGCAACATATTCGGGTGCATACTGGCGAGAAGCCCTACAAATGTTCCTATTGCGATAGAAGATTTAAGCAATTAAGTCATGTTCAACAACACACTAGACTGCATACGGgTGAGCGCCCATACAAATGTCATTTGCCTGACTGTGGACGGGCGTTCATAcaattatcaaatttacaacaacaTTTGAGGAATCACGATGCACAAGTGGAACGGGCCAAAAATCGACCGTTCCATTGTAATATTTGTGGAAAAGGATTCGCCACTGAATCTAGTTTGAGGACACATACGTCGAAAGTAAGCCATTGTATTGGTCGTTTGCAGCAACATGCAGCTCTTATTGGAGGACCAAATGCCACCTCATGTCCACTTTGCCATAAAATGTTCTTAGGTGGTGAAGCCCTCATGGAACACatgaaacacacacacaaggACCCCAACGCCTCTGGGGTAGCCACGAAAAGGAGGACAGCCAATCACCCTTGTCCTGTGTGTGGCAAACATTATGTTAATGAAGGATCTTTAAGAAAACACCTTGCGTGTCATCCTGAAACATCTCAGTTGTCGAGTTCACTTAGAATGTGGCCCTGTTCTGTATGTCAAGCAGTTTTTACAAACGAATCAGGATTGCTCTCTCACATGGAACACATGCGAATGGATCCAAAACATCAATTTGCAGCTCAATACGTCCTATCGCGGGCTGCTGCCGAACGCCGTGAACGAGAATCACTTTTGGCAGTTGTTTCGGCGTCCGCGTCTGGTAGCAGTCTTTTGGGACTCACTGGAATGGGTCCAACAAGTGGTAGTCCAATGTGTGCTTCGCCTAGTGCTCACAGTGACAGTTCCTCCGGTAATGGTCGTTTATCATCTGCCGGCTCAGAGGCTGGCGGcctcaataataataataataattgcaaCACAAAATTAGGAGATATTTTAAGAAGTAATAATGGCTTACATCAGCAGTACAATGTTGAGGATCAATTGCACACGGCAAATCGAATGGCCGGCGTTATTGCAAATATGGTGGGCCAGGGCGGAGTGCCACCCGGATTGGGATCAGATCCCTCAGCTGCCGCAAACATTGCCAATATTGCGAATCTTGCCATGCGACTTGGTGCTACTCAGGCTAATCAAGTGAACAACCCCAGCAACCCATCCACACCGCCCATCTCCAATGACACTTTATCGTTGTCGGTGAACGCAATGAATGCGATGCGAGCCTCTATGGACAGCATCCGAAACATGGACGTGATGCGCTCCTCTGTGATGGACATGTCCTCATCGCAACAATCGCAACAACAGCAGGACGCGTTGCGAATGCAGCATGCCGAAGCGCTTATTCGATCTCAGGCAGAGACGGCCCTTAGACTAGCTATGAGCCAGCATTTGCCGCAACTGAATCAACAGGAGAACAGCCATACTCCACTACGCCATAATGGTCATTATCAAGGCCAGCAAGGACAGTCATCACAAGTGAGTCCTGACTTGACGGAGGCCCTTAGGCTTCAGGAACAGAGGCTAGAGCAGGCGTTACGATTGCATGGGGGCGATCCCAGAACGCTGGGACTGGGATTTTCCTTAACAAGTCAACAACAAAACCAACAGCCATGA
Protein Sequence: MYEDGFNEIRATTSTTTITTTSTTAIDNISNIHTWTTTSTPMYSTSHMSIPYTTFDPGPSTSNVYSQPSMFPFPPYPGVHVPFDYPQIFMHKSAMQIHARELGRTEVKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKCHLPDCGRAFIQLSNLQQHLRNHDAQVERAKNRPFHCNICGKGFATESSLRTHTSKVSHCIGRLQQHAALIGGPNATSCPLCHKMFLGGEALMEHMKHTHKDPNASGVATKRRTANHPCPVCGKHYVNEGSLRKHLACHPETSQLSSSLRMWPCSVCQAVFTNESGLLSHMEHMRMDPKHQFAAQYVLSRAAAERRERESLLAVVSASASGSSLLGLTGMGPTSGSPMCASPSAHSDSSSGNGRLSSAGSEAGGLNNNNNNCNTKLGDILRSNNGLHQQYNVEDQLHTANRMAGVIANMVGQGGVPPGLGSDPSAAANIANIANLAMRLGATQANQVNNPSNPSTPPISNDTLSLSVNAMNAMRASMDSIRNMDVMRSSVMDMSSSQQSQQQQDALRMQHAEALIRSQAETALRLAMSQHLPQLNQQENSHTPLRHNGHYQGQQGQSSQVSPDLTEALRLQEQRLEQALRLHGGDPRTLGLGFSLTSQQQNQQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330090;
90% Identity: iTF_01330090;
80% Identity: -