Basic Information

Insect: Silvanus unidentatus
Gene Symbol: -
Assembly: GCA_963930825.1
Location: OZ005762.1:1624891-1626664[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00074 0.073 13.7 1.2 1 23 196 218 196 218 0.96

2 11 0.00023 0.023 15.4 0.9 1 23 235 258 235 258 0.94

3 11 3.3e-07 3.3e-05 24.3 1.2 1 23 271 293 271 293 0.97

4 11 6.2e-06 0.00062 20.3 3.1 1 23 299 321 299 321 0.98

5 11 1.4e-08 1.4e-06 28.6 0.5 1 23 327 349 327 349 0.98

6 11 5e-08 5e-06 26.9 0.7 1 23 355 377 355 377 0.98

7 11 3.6e-07 3.6e-05 24.2 1.4 1 23 383 405 383 405 0.98

8 11 2.6e-05 0.0026 18.3 1.6 1 23 411 433 411 433 0.98

9 11 3.1e-06 0.0003 21.2 1.0 1 23 439 461 439 461 0.98

10 11 9.4e-05 0.0093 16.6 2.5 1 23 467 489 467 489 0.98

11 11 8.7e-06 0.00086 19.8 0.2 1 21 495 515 495 516 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00074	0.073	13.7	1.2	1	23	196	218	196	218	0.96
2	11	0.00023	0.023	15.4	0.9	1	23	235	258	235	258	0.94
3	11	3.3e-07	3.3e-05	24.3	1.2	1	23	271	293	271	293	0.97
4	11	6.2e-06	0.00062	20.3	3.1	1	23	299	321	299	321	0.98
5	11	1.4e-08	1.4e-06	28.6	0.5	1	23	327	349	327	349	0.98
6	11	5e-08	5e-06	26.9	0.7	1	23	355	377	355	377	0.98
7	11	3.6e-07	3.6e-05	24.2	1.4	1	23	383	405	383	405	0.98
8	11	2.6e-05	0.0026	18.3	1.6	1	23	411	433	411	433	0.98
9	11	3.1e-06	0.0003	21.2	1.0	1	23	439	461	439	461	0.98
10	11	9.4e-05	0.0093	16.6	2.5	1	23	467	489	467	489	0.98
11	11	8.7e-06	0.00086	19.8	0.2	1	21	495	515	495	516	0.95

Sequence Information

Coding Sequence: ATGAAACTAGATAAAATTTGTCGAACATGTCTAATGGAAAAAGCAAATTTACGTAATTTATTTGAAGCCTGCATCGCAAATATGCTAATGTCTTGTGCTTCCATTCAGGTAATAAACGGAGATGGTTTACCCCACCAAATATGCACGCAATGTTTACAAAACGTAAACCGCGCCTACAGTTTTAAACAGTTGTGTGAAAAGTCTGATGCCACGTTACGACAATATATGAACACTCTACAACCAATCGACACCAGTTCCAGCATCCAGAACATAATAAACGAAGTAAAAAGTGATATTTTCAACACAACGGAAGTCCTACAACAGTCCAGTTTATTTCAAGACATTTTCAACGATGCCACCACGCATTCCTTAGTTGAAAATTTCACTAATCAAAATGCCAATACAGTCGTGTCTGATTTAGCTGAAACAATGCAAAGTTTACAAACGATTGCTGAACAGTGTCTGCCGGACACTTGGGACACAGATGCCCAATTAGTTTCCTGTTCAAATAACTCCCAAGACTCACATTTAAACGCATTCAATTTAACTCAAGATTTGTACACAATTCCCCAACAGGAAAACAAGTACTTTTGCAGTCTTTGTCCGAAAATCTTCCATACCAACATGGATTTAGACAAACATCTTATCGAACACACTTTAGAGAAGAGCATCAACCAGTTTGAGAGTAAAAAATTCGAGAAATTCTTTTGCAACATTTGTGACCGTGACTTTGGCGATGAGAAATTCTTGAAAAAACACTTAAAAGACATCCACTACATCAACGACTCAACTGGCGACGTTGAACGCAAACACATTTGCAACATTTGCGGcaaaagttacaaacaaaacaaattattgGTGGTTCATATGCGTTTGCACACCGGCGAACGTCCATTCCGTTGCGATTTATGTGGTCGCACATTCTCTTTATCAAGTTCATTACACAAACACAAAAACGTGCACAAATTAGACAAGAAATTCACGTGCAACGTTTGCGGAAAGAAATTCAATCAATCATCAAACTTGAACGCTCATTTATTGATTCACACTGGCGACAAATCGTACAGTTGCACCATTTGCgagaaaatgttttatacaAGCACCAATTTAGAGGTGCATATGCGTGTACATACGGGAATTAAACCGTTTACGTGCACGTTTTGCGACCAATCATTCGCAACGAGTACACAGTTGAAAAAGCACATTATGGTCCATACTGGCGAGAAACCGTATCCTTGTTGGCAATGTGGCAAATCGTTCCGTCGAAAGGAGACAAGAGACACGCATTTACGCTACCATACCGGGGAGCGGCCGTATGCTTGCAGTCTTTGCGATAAAAAGTACATAGCCGCAAGTCATTTAAgaGTGCACATGAAAACGCACACAAACAATCGAACACACGAATGTCCGTATTGTTTGCGTAAATTTTTCGATGCGAAAACGCTTCGGTATCACATAATGACGCATACTGGCGAGAAACCGTACGTTTGTCCGCGATGCGGTAAGCAATTTACACAGTCAGGTGGATTGAAGACACATTCAAGAAACTGTAATAAATAA
Protein Sequence: MKLDKICRTCLMEKANLRNLFEACIANMLMSCASIQVINGDGLPHQICTQCLQNVNRAYSFKQLCEKSDATLRQYMNTLQPIDTSSSIQNIINEVKSDIFNTTEVLQQSSLFQDIFNDATTHSLVENFTNQNANTVVSDLAETMQSLQTIAEQCLPDTWDTDAQLVSCSNNSQDSHLNAFNLTQDLYTIPQQENKYFCSLCPKIFHTNMDLDKHLIEHTLEKSINQFESKKFEKFFCNICDRDFGDEKFLKKHLKDIHYINDSTGDVERKHICNICGKSYKQNKLLVVHMRLHTGERPFRCDLCGRTFSLSSSLHKHKNVHKLDKKFTCNVCGKKFNQSSNLNAHLLIHTGDKSYSCTICEKMFYTSTNLEVHMRVHTGIKPFTCTFCDQSFATSTQLKKHIMVHTGEKPYPCWQCGKSFRRKETRDTHLRYHTGERPYACSLCDKKYIAASHLRVHMKTHTNNRTHECPYCLRKFFDAKTLRYHIMTHTGEKPYVCPRCGKQFTQSGGLKTHSRNCNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01121901;
90% Identity: -
80% Identity: -