Suni012760.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- -
- Assembly
- GCA_963930825.1
- Location
- OZ005760.1:18649673-18651459[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-11 2.9e-08 33.5 0.0 2 40 8 46 7 48 0.95 2 2 0.26 3.9e+02 1.1 0.2 32 43 450 461 448 463 0.85
Sequence Information
- Coding Sequence
- ATGTCGAGACAAAAATGGAACGAGGAGGACATGACTGCAGCCTTAAACGAAGTGAAGAAGAAAACAATGGGATTCAAACTGGCGGCAAAAACTTATAATGTTCCTAGAACTACTCTGCGTAGGAGATTCAAACTACATCAGGATGGAACAAAAGGTACGGAACTAAGAACTCTAGTTTTCGATTTGGCGGAAAAGAAAAAGATTAAGCACAAATTTAGTTTAGAAAAAGGAATCGCAGGGAAAAAATGGTTAAAAGGCTTTCTAACAAGAAACCCAACTATTTCTGTACGAACATCAGAAAATACGTCGTTGGCTCGATGTGAAGCATTCAACAAACCAAATATTTCCCGATTTTTCCAAATGCTAAAGGAAGTACTCGATCTTTACAATTTTCCTCCAGAAAACATTTACAACGTTGACGAAACAGGGATGAGTACTGTTCCAACAAAAACCCAAGAAATCTTGGCCACGAAAGGTCGTAAACAAGTCGGCGTTGTATCGAGTGCAGAAAGGGGACATCACTATACGGCAGTATGCTGTATCAATCCTGTAGGAATATTTGTTCCACCTGCGTTTATTTTTCCAAGAAAACGCTATAAGGCCGAATTGATGGACGGTGCTCCACAGAGCAGTGCGGCTTTTTGTCAAGAAAATGGGTGGATGAATTCGGAAACTTTTGTTAAATGGCTAAAACACTTTACCGAATTCGTTAAACCATCAAAAGAAAAGAAAGTTCTTCTCATTCTGGATGGGCACAGCAGTTACAAATCATTGGAGGTACTCGATTATTCAAAAGAACACGGCAATATTTTGTTTTGTCTTCCTGCTCATTGTTCGCATAAGGTCCAGCCGTTGGATGTTGGTTTTTTTGGGCCCTTGCAGGTCTTTTATAACAATGAAATTCAAAAGTGGACAAAAGCAAATCCTGGTCGAGCCGTGATTCACTTTCAAGTGACGactttatttaataatgcgtACCTAAAAGCCGCTACACTTTCGAACGCATCAAATGCTTTTAAAAAATGTGGGATATTTCCATTTGATCAGGACATTTTTGAAGAGTCGGAATTCGCTCCTTCGTTAGCAACGGACAAACCACTAGAAAATGAAGTCGCTTCTGCTTCTATTCAGGATGAAACTGAAAATAAACTACAAAACGAGCTACAAGATGATATCGAAGGTGATTTTCAAAATAACATCGCTAGTCCTTCTCAAAATGAAACCGTAAATGACGATGAATCTGATGGACCGTCTACTTTACTCAATAAAAAGGAGTCTACTATCAAAGAAATTTCAAGAAGCGATATAGAAGAACTTTCTCCCTTACCCCAATGTTCGAAAAGAGTCACTTTAAGAAAAAGAAAGCGAGGAAAAACGGGTGTTTTAAATTCGACGCCAGATATTGAAGAATTAAAATGTAAAGCTAATGAAAAATTGGAGAAAGAACGACGAAAAAAATCGAGATCGATTAAGAGAGTAATTTCTATATCTgatgagaaagacaatgaaAACGATTTATCCAAAGATTCAGACTCTTCCGATGTCTTCTGCTTATATTGCAATGAACTGTATTCAACATCACGTCCTAAGGAAATATGGATAAAGTGCCAAATTTGTGGAAAATGGTGCCACACCGAATGTGCTGGCGTTTCGCAAAGATGCAAAGTATTCATTTGCGATGTCTGCCAATAA
- Protein Sequence
- MSRQKWNEEDMTAALNEVKKKTMGFKLAAKTYNVPRTTLRRRFKLHQDGTKGTELRTLVFDLAEKKKIKHKFSLEKGIAGKKWLKGFLTRNPTISVRTSENTSLARCEAFNKPNISRFFQMLKEVLDLYNFPPENIYNVDETGMSTVPTKTQEILATKGRKQVGVVSSAERGHHYTAVCCINPVGIFVPPAFIFPRKRYKAELMDGAPQSSAAFCQENGWMNSETFVKWLKHFTEFVKPSKEKKVLLILDGHSSYKSLEVLDYSKEHGNILFCLPAHCSHKVQPLDVGFFGPLQVFYNNEIQKWTKANPGRAVIHFQVTTLFNNAYLKAATLSNASNAFKKCGIFPFDQDIFEESEFAPSLATDKPLENEVASASIQDETENKLQNELQDDIEGDFQNNIASPSQNETVNDDESDGPSTLLNKKESTIKEISRSDIEELSPLPQCSKRVTLRKRKRGKTGVLNSTPDIEELKCKANEKLEKERRKKSRSIKRVISISDEKDNENDLSKDSDSSDVFCLYCNELYSTSRPKEIWIKCQICGKWCHTECAGVSQRCKVFICDVCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -