Suni016163.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- -
- Assembly
- GCA_963930825.1
- Location
- OZ005762.1:3313780-3315612[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-12 3.9e-09 36.2 0.1 1 44 15 58 15 59 0.95 2 2 5.1 7.5e+03 -3.1 0.0 12 22 140 149 138 149 0.78
Sequence Information
- Coding Sequence
- ATGCCACGAAAATATGTAAGAAAGACAAACCGAGCTACTTGGACACAAGAAAATTTAGAAATAGCTATACAAAAAATTACCGAGAAATCATTATCGATCAATCAAGCGAGCAAAGTGTACAAGATCCCAAACAGAACTCTAAGAAGAAGGATTGAAACCAAAAATTCGACGAAATTAACTTTAGGAAAACACCCTGGCCTCGGTTTCGATAATGAAAAACGTCTAGTGgctcatattaagcgtttacAAGCAGCAGGCTTTGCCCCATCACCTAAAATGGTACGTGGTATAGCGTATTATTTTGCAAAATGCATTGGAAAAGAAACAATATTTGGCCCAAAAGGTTCTCAAGAAGAATTGGCAGGAGTACATTGGTTTCGTTCTTTTATGGAGCGACAGAGTGATCTGTCAATAAGAGTGAGCGAGGGTTTATCATTAGCTCGTGCCAAAGGAATGAACCGAAATGAAGTAAATGGCTTCTATGACCTCCTTCAAAAAACATTAGCTGATAATAACCTGCAGGACCAACCAAATAGAATATTTAACATGGATGAGTCAGGAATCCAGCTCACAAATGTACCTGGCAAGGTGGTTGCTGCCAAAGGAAGCAAATGCGTCCATACCCTTACACCAAAAGAAAAAGGGGAAACCATATCAATTGTCGCATGTATTAATGCAGAAGGCGCCTTTTTACCACCAGTTCTAATTATGAAAGGAGTTAAAAAACTTGCAAACAGGCTAGATGGCTTACCCCCAGGCTCGGATCTCTATATGAATAGAAAATCTTCATATATTAATgcagaatttttttttaaatggtTTAAAGAAATATTTCTGCCGAGGAAGCCAGCAGGCAAAGTTCTTTTGATTTTAGATGGTCATGCATCACATTGTAATAACTACGAACTACACAAAGTTGCTGAAGAGAGTGAtgtcattttattatgtttaccCAGTCATACAACACAAGCACTGCAACCTCTGGATCGAGCTTTTTTTAAACCATTTAAAACTTATTATAAACAAGAAGCGCAAGATTGGATATTTTCAAACAAGGAGCGAACTTTAAACAGAGATGTGGTCGGTAAATTAATTGGAAACGCGTGGAAGAGGGCTGCGACAGCACAAAATGCAATTTCAGGATTTGATGCAACAGGAATATACCCATTTAATAGAAACAAAATACCTGAtcacttttttgaaatatttgatAACAGTGCAGCAAATCACACATATGAGAATTTACCTCAAGATTTTTTAGAGGATGATAATAATTACCTATTTCTATTCGAAAATGAGAACCAAAATCGAAACCAAAATACTCCTGAGGTAAATGTTAATGAAGAAACACCCTCTAAATTTTTGGATGAAGCTGCTCCTGTGCCAAATATCCCAATAAACCAGTCTAAACGCAAACAGTCAGCGAGAATTTTAGTTCATTCCGAAGTTAACTTAATTACACAAACGCAAGATGCAGTGGAAGTTGATCAGGGAAAAAATGAAACTCCGAATGAAACCCAGACCGATTCCGACAACAACAGTAAAAAGGGAAAAATTGTAACTGCTCCAACGAATAGTAAAAAAATGATCAAGAAtaagacaaaaaaaattagaagCGATTCCAAACAAAAACAGAATGCAGAAGAAGAGGATTCAAATTGTGTTGAATGTGAGGAAAGTTATTTTCAAACAGTCGAAAATGTCGACTGGATTCAATGTGTCACCTGCAGGGGATGGTTGCACGAAAGCTGTACGATGTATGGTGACTTTTGTAATAATTGTGGCAAAATCAAAAAAAGGAAACTTATACGGGAAAGAAAAGTACCTGCCTAA
- Protein Sequence
- MPRKYVRKTNRATWTQENLEIAIQKITEKSLSINQASKVYKIPNRTLRRRIETKNSTKLTLGKHPGLGFDNEKRLVAHIKRLQAAGFAPSPKMVRGIAYYFAKCIGKETIFGPKGSQEELAGVHWFRSFMERQSDLSIRVSEGLSLARAKGMNRNEVNGFYDLLQKTLADNNLQDQPNRIFNMDESGIQLTNVPGKVVAAKGSKCVHTLTPKEKGETISIVACINAEGAFLPPVLIMKGVKKLANRLDGLPPGSDLYMNRKSSYINAEFFFKWFKEIFLPRKPAGKVLLILDGHASHCNNYELHKVAEESDVILLCLPSHTTQALQPLDRAFFKPFKTYYKQEAQDWIFSNKERTLNRDVVGKLIGNAWKRAATAQNAISGFDATGIYPFNRNKIPDHFFEIFDNSAANHTYENLPQDFLEDDNNYLFLFENENQNRNQNTPEVNVNEETPSKFLDEAAPVPNIPINQSKRKQSARILVHSEVNLITQTQDAVEVDQGKNETPNETQTDSDNNSKKGKIVTAPTNSKKMIKNKTKKIRSDSKQKQNAEEEDSNCVECEESYFQTVENVDWIQCVTCRGWLHESCTMYGDFCNNCGKIKKRKLIRERKVPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -