Suni015400.1
Basic Information
- Insect
- Silvanus unidentatus
- Gene Symbol
- bab1
- Assembly
- GCA_963930825.1
- Location
- OZ005761.1:20412945-20419048[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-12 1.2e-08 34.7 0.0 1 39 367 406 367 410 0.90 2 4 1.5e-12 2.2e-09 37.0 0.0 1 39 421 459 421 462 0.95 3 4 3.6e-19 5.3e-16 58.3 0.0 1 45 476 521 476 521 0.98 4 4 2e-17 2.9e-14 52.7 0.0 1 39 528 567 528 571 0.94
Sequence Information
- Coding Sequence
- ATGTCTGGCCAACATTATTGCCTGCGATGGAACAATTACCAGACAAACATGACATCAGTTTTCCATCAATTACTGCAAAATGAGGCGTTCGTCGATGTTACATTGGCCTGTAATGATTTGTCATTGAAGGCGCACAAGGTGGTCCTGTCGGCATGTTCGTCCTATTTCCAGAAACTGCTGTTGGAGAATCCATGTAAACATCCAACCATCATAATGCCCCAAGATGTGTGCTACACTGATCTGAAATTCATCATTGAATTCGTCTATAAAGGTGAAATTGATGTTTCACAGACCGAGTTGCAGTCACTGCTCCGTACAGCGGACCAATTAAAAATCAAAGGCCTTTGTGAATCGCCGGACAATAGTGAAGAGGACGGCGGCCACCAATCACCGTTGTCGCATTTCGTCAAATCGCCCCGCAAGTCCACATCACCGAAACAATTCAAATTGCAACAGGAAAACCATAGAAAGTACAAATACAAACGGCACAATCATCGCGACAAAGAGAACAACGCCACCAAGGACACAGCATCAGATGAAGAAAATGACATGCCAGTAATCGTGTCGGATGAACATAAACGGAAACGTTTCGAACCAGAACAGACGAAACCGCTCAACATGAGTAGTCATGGTATTATTGCAGGCCAAACGatattttcacagtttggtGTCGACACTGATGACTTCCCACCTGAGCCGCCCGCACCATCTGCCATCCCTGTTGGCCATATGGACATGCAGGATCACTCGCCGACACGTACACTCCTCACCAACACCGCCATCCATCGTACCGACCTCTCCGATTCCACCAAATACACGTTAGATATCAAAAAAGAGTCAGACATCAAATTCGAAACGCTGCGCTCATACGATCAGGAATCGATATTGGAAATTGATTCGCGTATGTCGGGTGCGGAACATTCGTTGGACAGTCATGACGATGATCGGTACAGTTCGATGATGGTGTCACCGGAATACAATCGAATCGTGCCCGGCATTTCGAACAGTGGCGATGAAATGTCACCGTTGAAGAACAACGATTGCAATGAGATGCAACACCATGTGGCCCGATCGCACACCGGCGGACCGAAGACATGGACACAAGAGGACATGGATATGGCATTGGATGCACTTAGGAATCATAATATGAGCTTAACGAAGGCGTCCGCTACGTATGGGATCCCGTCGACGACGCTATGGCAACGGGCGCATCGTTTAGGCATCGATACACCGAAGAAGGAAGGACCGACAAAATCATGGACTGAGGAGAATTTAAATAATGCATTAGACGCTTTACGAACCGGAACTATATCCGCTAACAAAGCCAGTAAAGCTTTTGGAATTCCGAGTAGTACGTTGTATAAAATCGCTAGAAGGGAAGGAATAAGACTGGCAGCACCATTTAATGCAGCACCAACCACTTGGACACCGGAAGATTTGGAGAAGGCATTGGAATCGATCCGAAGTGGACAGACGTCCGTGCAAAAGGCGAGTACGGAATTTGGTATACCGACTGGCACGTTGTATGGACGATGTAAACGGGAAGGTATAGAATTGTCTCGATCAAATCCCACGCCTTGGTCAGAGGATGCGATGAGTGAAGCATTAGAAGCTGTTAGATTAGGTCACATGTCAATCAATCAAGCTGCAATTCACTACAATTTGCCTTATTCGTCACTATATGGACGATTTAAACGTGGTATTAAATACGATTCCGATAATATCGATGTGAACCAAGATAGTCAATCACAAATGGATACACATTCGATTGGAATGGATTATACAAATTCACATCAACAAATTCCCTATCAGAATCAAACGAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYTDLKFIIEFVYKGEIDVSQTELQSLLRTADQLKIKGLCESPDNSEEDGGHQSPLSHFVKSPRKSTSPKQFKLQQENHRKYKYKRHNHRDKENNATKDTASDEENDMPVIVSDEHKRKRFEPEQTKPLNMSSHGIIAGQTIFSQFGVDTDDFPPEPPAPSAIPVGHMDMQDHSPTRTLLTNTAIHRTDLSDSTKYTLDIKKESDIKFETLRSYDQESILEIDSRMSGAEHSLDSHDDDRYSSMMVSPEYNRIVPGISNSGDEMSPLKNNDCNEMQHHVARSHTGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMSEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDSDNIDVNQDSQSQMDTHSIGMDYTNSHQQIPYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01121837;
- 90% Identity
- iTF_01345105;
- 80% Identity
- iTF_01345105;