Basic Information

Gene Symbol
ct
Assembly
GCA_963930825.1
Location
OZ005760.1:17208882-17221622[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 8.7e-28 6e-24 84.1 0.0 2 72 307 378 306 383 0.95
2 4 1.2 8e+03 -2.9 0.0 36 55 411 430 404 433 0.82
3 4 2.3e-32 1.6e-28 98.7 0.0 3 77 695 770 693 772 0.96
4 4 1.4e-30 9.6e-27 93.0 0.0 3 75 902 975 900 979 0.95

Sequence Information

Coding Sequence
ATGGCTGATAATAACAGCGAAAATATCAATCAACTGTTAGAAGAAGTTCAAAGGCTTCAAGGATGTCTAACGAAATTGCAGGAATCGTCCATGTCTCAAATAACTAGACTTGAAGAACAATTGGAACAAAAACGCCAGCACATAACGCGATTAGAAGGAAAACTCGATTCACAGAAAGATTACGACGATTTGAAACGGGAACTTAGCATTCTGAAAAATGATTTAGCCAATAATCCTGAAGCTGGTAAAAATCTAGAACTATTATTAGAGAAAACGAAAAACTTACAACAGAATAATGAAAACCATGAGAAACAAAACGTATCCGAGACTGAAGGGGTTGCAAATCATCAGGACGCACCCCCAACCCTATCTGTAACACCTCCGAACCACCTTCCTCCTCCTTTCCAAAACGTAGAACAATTTGGTAGCATATTAGGAGAAGAAATCGTCGCCAATTGGCGACGAAATCTTGACCAAATCTCTAGAATAACCCCTAAATCACCATTAACAGATGGACCAGTGAAGGTGACCACTCCGATGGCGGCCGACTCGACGGAGAAGAGCACCGCCTCCACACCGCAGCCGGTCGACACCACCAGCCAACAATCGGTCACCGATGCCACTTTAATGGTGAACGGCAATCCGAAAAGTCCGGAGGACAACAACAACCACCATGTCAGCAATAATAACATTCCTATGAACGCGACCATTTGTGCGGTCAGTAATTTCCTAAGAAGCGACGATCTGAAGAGTCCGTATCGGTTCGAAGAGCACCGTTCGCCGTTCCGGTTCGCCGAGGATCTTGGCATGGCACCAGGCTCGATGGTTAGTCGACTGGGCGAGAGTCTGATACCGAAGGGCGATCCAATGGAGGCGAAATTGCAGGAGATGTTGCGGTATAATATGGACAAATACGCCTCGCAGAATTTGGATACGTTGCATATTGCGCGAAGAGTTAGAGAACTGCTTTCGATCCACAATATTGGACAGCGGCTGTTTGCCAAGTACATTCTGGGACTGTCGCAGGGAACCGTGTCTGAATTGTTGTCCAAGCCGAAACCATGGGACAAACTCACTGAGAAGGGGAGAGACAGTTATAGGAAGATGCATGCATGGGCCTGCGATGAGAATGCCATCATGCTGCTGAAGTCGCTTATACCAAAGAAAGACAGTTTTTCCTCAGGCAAAGAAACAGGGATACCCACATTTGGACGGCCTGAAAACGATCTGACTGAGGAACGACTTGCTCACATTCTAAACGAAGCGTCGCAATTCCAACAAATGAAAAACCACAATACCGAAGATACGCACAGTAATGAGGACTCGAAATCGCCGCACGGATGCTCCAGTCCCTTTTCGAAAGAATCGTCACTCAGTAAACGCTTGAAGAAGTACGAGAACGACGATATCTCGCAAGAGAAAGTGATGCGCATTTATCAGGAAGAGTTGGCCAAATTGATGGGCAGACGAATGGAGGACCTCCGAAACAATCGTGAAGGCTTCCCAGGCATGTTTCTACCTCAACTATTCAGTGGCAACATGATGGACCGCACACAAGAAGAGATCCGAATGGCGATCGACGCATATCACAGAGACTTGGCCAAATTAAGCCAAACCCAACCGGGCCAGATGCCTCCACTAGGTCTTCTAGCCCTTCAACAGCAAGCCCTCGCCGCCatccaacaacaacagcagccCTCAGCGAACGGCGGCGTCCAGGACCTCTCATTGCCTAAAGACAAAATCAAAGTCTCCAACGGACTGGACGAGAAGGAGAGCAAAGACGATGAAACGATGCGGCATTCGGGCAGTGCCTTCAGCTTAGTCCGACCGAAAATCGAGCCCGGTTCACAAACAAGTGGCGGCTCGACGGCCTCCAGTCCATTAGGGAACACTATTCTACCGCCAATGACGCCTACGGACGATTTTTCAGGTTCTGCGTCTGCGAGTCCATTGCAACGGATGGCTTCGATAACGAATTCCCTTATTTCACAACCACCAACTCAACCGCATCACACAACCTCACAACGGCCTCTGAAGGCCGTCCTTCCACCAATCACACAACAACAATTCGATCtgtacaataatttaaataccGAAGATATCGTTAAGAAAGTTAAAGAACAATTAAGTCAATACTCGATCAGTCAACGTTTGTTTGGCGAGAGTGTGTTGGGATTGTCTCAAGGTTCGGTTAGTGATTTGTTAGCCAGACCGAAACCTTGGCATATGCTTACACAGAAAGGACGTGAACCATTCATAAGGATGAAAATGTTTCTGGAAGATGATAATGCTGTGCATAAACTAGTGGCGAGTCAGTACAAAATCGCACCGGAGAAATTAATGAGAACTGGAGGTTACGGGGGAGCTTGCAGTACTTCCATGAATAAGCCATTGCCTCCCTCATCGAAGATGTTATCGGATGCCGCTGGCCTTATAAACAAAATGCAAGAGAGTCaaaatttttctaatttacaATTGGGTCCACCACAAAGCCAAAATCCGCAACCTCCGCCGCCACCGATGCTTCTTACACCGCCCGGTATTCCACCGCATCATGCCATCAGTTTACAAAATCCCGAGCATTTGAAGAAATCGAACCCCACCGCACACAGCATCCCCCATTCCCCGATGTCTCAGCATCAGTCGTCGTTGAGAAACATGCACATGAGTCCTAGTGTCTACGAGATGGCTGCTTTGACACAGGATTTGGACACCCAAGTGATTACCACCAAAATCAAAGAAGCTTTGTTAGCTAACAATATTGGCCAAAAGATTTTTGGGGAAGCAGTTTTAGGACTTTCACAAGGTTCCGTCAGTGAATTGCTCTCAAAACCAAAACCATGGCACATGCTGAGCATAAAAGGCCGTGAACCGTTCATTCGTATGCAATTGTGGCTAAACGATGCCCACAACGTCGACAGACTACAAGCGCTCAAAAACGAACGCCGTGAAGCGAACAAACGACGACGCTCGTCCGGTCCCGGCGCCCATGATAACAGTTCGGACACGTCTTCGAACGACACCTCCGAATTCTACCACTCCAATTCCCCCGGACCCGGTCCACCGTCCGCCAAAAAGCAACGAGTGCTTTTCTCCGAAGAGCAAAAAGAAGCCCTCCGTCTGGCATTCGCTCTCGACCCTTACCCAAATGTGGCCACAATTGAATTCTTGGCAGGCGAATTGGGCCTTTCAAGTCGAACAATCACCAACTGGTTCCACAACCATCGAATGCGTCTAAAACAGCAAGTACCGCATGGAATCGCATCCGATATACCACCACGCGATCAAAGTGGCAATCAGGCACCATTTGACCCAGTTCAATTCAGACTGCTTCTAAACCAAAGATTATTAGATATATCAAAAGAACGGATGGGTCTTAGTGGTGTACCACTCCCATATCCGCCATATTTAACGGCGAATCCAAATTTAGCAGCGTTAATCAGCCGTGGACTGTTACCGACAGCCGACATGGACTTGTCAGCATTGAATAACGCAGTTAAAGAGCAGATGAGCGGTTTGGATTTGTCGATGACGAGTTTAAAACGCGAACCAGGCGATTTTGATGATGAGGACGATGTGGAGAGCAATGTGGGCTCGGAGGATTCGAACATGTCGGGCAGTTTGCATGGTGAAGTGAAAGTAGAACCTAAAGAGACACCGGTACAAAATCAGGGAAGATCGTCTAGGCGGAAACCGGCCGCTCCGCAATGGGTGAACCCTGAGTGGCAGGACGAGAAAGAGAAACCACAAACCGGTGACGAGGTTATAATAAATGGTGTTTGTGTTATGCAGACGGAGGATTATGGTAGAAGGAATGCGGAGGAGACGGTCAGAGTGGAACCGACACCGGTAATGGACCGTTTTGAGGATGATCAAAGTGATTCGTCGTCAGTGAGTAACGATAATGAACAAACCGATAAAAATGAAAGCAAGTGCGAGGAAACAGATCAAAATGGTGACGATGTGGAAAAGAGAGATGATAGTGAAACGAAACCGGTAAAACAAGAGAATGAAGACGAACGGTGGGATTATTAG
Protein Sequence
MADNNSENINQLLEEVQRLQGCLTKLQESSMSQITRLEEQLEQKRQHITRLEGKLDSQKDYDDLKRELSILKNDLANNPEAGKNLELLLEKTKNLQQNNENHEKQNVSETEGVANHQDAPPTLSVTPPNHLPPPFQNVEQFGSILGEEIVANWRRNLDQISRITPKSPLTDGPVKVTTPMAADSTEKSTASTPQPVDTTSQQSVTDATLMVNGNPKSPEDNNNHHVSNNNIPMNATICAVSNFLRSDDLKSPYRFEEHRSPFRFAEDLGMAPGSMVSRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKDSFSSGKETGIPTFGRPENDLTEERLAHILNEASQFQQMKNHNTEDTHSNEDSKSPHGCSSPFSKESSLSKRLKKYENDDISQEKVMRIYQEELAKLMGRRMEDLRNNREGFPGMFLPQLFSGNMMDRTQEEIRMAIDAYHRDLAKLSQTQPGQMPPLGLLALQQQALAAIQQQQQPSANGGVQDLSLPKDKIKVSNGLDEKESKDDETMRHSGSAFSLVRPKIEPGSQTSGGSTASSPLGNTILPPMTPTDDFSGSASASPLQRMASITNSLISQPPTQPHHTTSQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACSTSMNKPLPPSSKMLSDAAGLINKMQESQNFSNLQLGPPQSQNPQPPPPPMLLTPPGIPPHHAISLQNPEHLKKSNPTAHSIPHSPMSQHQSSLRNMHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGIASDIPPRDQSGNQAPFDPVQFRLLLNQRLLDISKERMGLSGVPLPYPPYLTANPNLAALISRGLLPTADMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVESNVGSEDSNMSGSLHGEVKVEPKETPVQNQGRSSRRKPAAPQWVNPEWQDEKEKPQTGDEVIINGVCVMQTEDYGRRNAEETVRVEPTPVMDRFEDDQSDSSSVSNDNEQTDKNESKCEETDQNGDDVEKRDDSETKPVKQENEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2