Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963930825.1
Location
OZ005759.1:955961-963619[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-27 1.1e-23 83.5 0.2 1 89 295 380 295 380 0.95

Sequence Information

Coding Sequence
ATGCAAGTGGACGATCCCCCTTATCTATCCGTTGGAACCGCCGTTAGTGCTAAATATAAGGGGGCATTTTGTGAAGCAAAAGTTAGTAAAGTGGTTCGCATAGTAAAATGCAAGGTCACTTACAAGATGGGCTTAGGGAATGCAACTGTTAGTGATGAGCAAATAAAGGGCACTCTTCGTGTGGGGCAATTGGTTCAAGCCAAACATCCAGACAAGAAAGAATTTCTCGATGCCACTATAACAAAAATACAAGATTGCAGCCAATACACTGTTGTATTCGACGATGGTGACATTACCACACTGAAAAGAACAGCACTGTGCTTGAAAAGTGGCAGACACTTTAATGAGAGTGAAACATTGGACCAACTGCCTCTAACTCATCCGGAACACTTCGGAAATCCAGTGGTGGGTGGCCGACGTGGTCGCAGAAACCGGCAGCTAAAAGAGGACAGCAGCGATGGTGAATTGGAGGAGGAAAACGAGCCCGATTTGGAAGGCTACCAGATCGATATTGGACGGGTTGTGAGTGTCGAAGCCACAGATAAGAAACGTAGTAAAGATAACTGGTTTCCTGGTCTTGTGGTCATTCCATCAGCCCAGCCAACAGTCCGAATAAATGTCAAAGATGAATACTTGGTTAGATCTTTTAAGGATGGAAGATATTACACAGTACCGAAAAAGGAAGTGTCCGATTTCAATCGGGAACTTGCTGAAAAAGTGGAAAGTTCCGTTCTACTCGAAGCCGTACAAAAAGCGTTGAAATATTTAGACAGTAGCGAATTACCCGTTCATTGGGAACGCAGTTCATTATTTAATTCGCAAAATTTAGAGACTGATTCCGAGGAGAATCTAACAGACAGTTCCGATGACGAACCGTGCGAAGAGAAAGACCGATTTGTTGCACAACTGTACAAATTCATGGACGAGGCCGGTACACCGTTGAACAAGACGCCAACCGTCAATAACAAAGACATCGATCTACATCGTCTATTTCGAATAGTGCATAAGATGGGCGGCTATAATCGTGTCACAAATCAAAATAAATGGCGTTCAGTAACACTTCGATTGCATTTACCAAACAACCAAAACACTTTCAATCAAGTGAAatcgatatttaaaaagtgtcTGCTCAGCTATGAGGCATTCCATCGCACCTTGGGTGTCACAATGCTGAACCATACACGGTCAACAAAGAAGAACCGCGGCAGGTCGCTGATACGTGATAAAGATCGTGCAACGCCTGTTAGTCATAGTCCGCGACCGGAAAAGGAGGACGAGTCTGGCAGTGAGAAGAAGGATGAGGTGAAAGAAACACCGCCACCGCCGGCTGTGGAGCCGGCCAAAGCGCCTAAGCGAAAGATTGAAGTGAAAAAAGATGAGGAGAAAAAGAAGAAAGATGTGGGCGAGGGCAGTGATACGAATAGTAGTGATACAGCGGAACAAAATGAGTTAATTACAACGAATGTGGTGTCGAAAGATACGGGCCGACCGAAGAGAAGTGATGGAAAACCTGTGAAAGAGCGAAAACCACGTACGCCTATAGGTGAGAAGGTGAAGAGTTTTGTGGAGAAATTGGAGGAGCCGCCAAAAAAAGACGATGACGAAAAGTTTCAACTGACCCGCTCCAAGTCTCAAACAAATGTTAAACAAAAGGAGAAAGATTCAATAAGTGAGAAGAAATGTGAAACAAAGGTGCGTGGGGATGGTGGTGGCACGACAAAGCCTCCACAACAAACCAAGTTAATGAAAAAGAGTCTAGATGAGGAGAAGAAACGTGGTAGAAAACGTGCAATACCTGAAGATAAAACATCAAATTCCGATAGTAGTACAACGGCTGGTGATGCAATCACACCGACAAcaccaaatttaaatttcaacaTCGGTGATAAATTGAAGGTGTATTATGGACCAACGCACGAATCCAAAGTGACATACGAAGCGAAAGTGATTGAAATCGATAAAGATTCGGTGCCGGTTTTGTATTTGGTGCATTATACTGGATGGAATACAAGATACGATGAATGGGTGACCAGTAATCGAATTGCGGAGAATTTAAGTGCAGCCACGAAAGCGAAACGATTGAAACAGGGTGCATCTCAAGCGGCAACCACATCGAAAACAACTGGCCAAAAGATGCCAACCAAAAGGGGAAGAGGTATGTCGATTACTGGCAGAACCTCAGCACCTGAAGTACCACGTTCAACAACTCCGTCCAGTGTGACGTCTTCGAGTAGTCGCACGAAGAGTCCAGCAACTCCTGCCACAAGATCAACAAGTAGATTGGCGAAATCAGATTCGACGAAAAGGAATCGTCGCACATCTGCACAGACAGACGTTTCGATTCATTCCGATTCAGAGTCGGATTTGTCGGAGAGTGAAACTGAGTTAAGTCGTACTAGAAGCGGTGGAAAAAGTGATGAATCTGAGGTGAAAACGTACAAGAGGAAAGTGAAACCGGCAGCACAGAGCAATGTGAAATCTGAGAAAGGCAAAGAAAAAGACGATAACGACATTGGAAAGGATTCCGATTCAGATAAACAGCCACGACGTGTTAGAAAAACGAAAATATCGCCAGAAAAGTCCGGTGAAGAAAGTGACGATGAAATTGTGCCGGCAAAGGGACGTGATTTCGACTTGAACCAAATACGGTCCGAGTTGAAAGGCTTTACGAAAGCATTGAAAGTGCCTCCACTCGATGCATCGGACAAAGATGGGATCACATCATCGGACGATTCCAATAATCTTGTTAATGAGAAACCGGAAGAAGAGGAAAAGAAAATGAAAGTTGAAGAGAAATCCTGTTCGGATGATATTTATGAGTTTAAAGAACCGGAACCGTTTGAATTCGAATCACGACCACCGAAACTCGGTGACGATTTAAAGAAACGTATCGTACCAAGAGTGTATGATGATGTGGATAAATCACCGCAAAAAAAGAAACTCATAAAATCACCAGAACAAAGTGATAGTGACAGTGATAAGAAACGATTTAAGCGGATACCAATTGTTAAACAGGAAGATTCAGAAGATGATGACAATATTAGACTGAGTACAATGAAGAAAGAGGACGATCCGTTTGATAAACTAGTCGAATCGCCATCGTATAACATAAGAAAACCGTTAAATGAAAAAGTAATTGAAGTGAATTCGAAAACAGTAAGAAATATTATGGAAGAGCCTTTGTTCCGCGATGTAATCGAGACGAATGTGGATGAATACACGAAGGAGATTATTTTGTCAGACAGTGAGATTCAAGCACAAAATATCTTCACGAGAGCAGGTGAATTATTTTCCGATACATATTCGAAAAACTCGCCTGATCGAAGCACATTAGAACTAGAATTCCCATTAAAACAGTACGAGAAATTGAAAGACAGCGATGACAATGAGGACGATTTAATTCGTGAACAAATTGAACGAGTCATACAACAAAGTTCCTCAACGGATGAAGACAGTATTGATGCATTGGCAATAAGACAGCCGACCACAAGTTACCTAGCAAAGAAACGTGAGGACATCAAAGTGGTGCCAATAAAAATTGAGGAGGTGATTGAAGACAAACCGATGGATATACCACAAATCCATATACCGGAGATAAAGAAAGACGAACCGCTTAATATAAATGTGGCAGCGTTTACGTTAGTGAAACAAATCACACCGGCAATTGTGGAAGTGGATAATACGcagaaaattttaattgcCACGAAAATCGAAGAGCCGAAAAAGACGGCAATAAAAATCTCCGATTCGATCTTACAGAAATTGAATCGGGCGACGATAGTTAAAGAAGAGAATGAGAACACCACGTCCGATATGGAACTAGAGCCGGATATTGGGGCACAGGAAATAAAAATTGAGACACCGTTAGAGAACAAGTTCAAAACAAGTGAACAAACGATGCCAGTAGCCGAGATAAAAGTGAAACCAGAAAAATATCAACCGTTAAATGAGACAAGGAAACGACGTAAAGCGATAAGTAGACAATACATTCTAGAATCGGATACAGATAGTAGTGATTCAGAGCAATTGATAATAGCACGATCCGATGAGGATTCACAGACGCGATCATTGGACAATAAAGATGTTAAAGAGTGTGACAGTATGTCGCAGGATGTACCAACAACTGACGATTCCCAACCACATCCACATGAAGAGcgcaattttaaatttgaagaGATTAAAAAGGATGTGCCCAAACCAGCAACTGAGGAGATAAAGAAGGATGTGGAGCCGGTGAAAGAGGAGGAACCCGATTCACAATTGCATTCTTTGTTGTTGTGCGAGGAGACGTTGCCTCGAAGTCCGGCACCGGTGCCAGAAACTCCGGTTATTGTTGAAATGAAACCGGTGAAGACGGTGTTGGAGATGCCGTTCGCCAGTGCACCGGGCACCAGTAATTCAACGAAGAGTATGTTGCTGGAGCATAAAAGTGTGATTAAAGTGCAAACGGCGGTACAGCAGCCGCGGCCTTTGCCGCCACCGCCACCGCAACCGGTCGCACCAATGGTTCTGATGACGGTGCGAGAGAATCGCAGTGGAAATGTGGCCGCTGTCTTGGACAATACACCGCCAACAACGCCGGAAAGTTCCATTAGCAATTTATCACCTAGAGGTGATAACGATAATTTGTCGCCAAACACAGTGGACAATGAAAGTTGTAAATCGAATGAACAGGAAAATGAATATTTACTACAACGTAGAAATTCAGCGAATAAAGTTACACCGTATAGTGAGGAAGATACGCAAATGACTGGTGAAACAAGTGCAATAATTAAGAAAACTAGAGAGGATTGTACGCCGCCAGTGAAGAAACGAAGGAAGAGTTTAAGAGGGACGGATGAGGTGCCTACGAAACGTGGCCGTAAACCATTGAATCGATCAAGACATAATAGTGATAGTGATGATACGTCAGAGCATTCGAATGCTGGAAGTATTAATATTGGAATATTTGATAGAAATCAACGGTCACCCAGACCAtctaaatacaattttttcgTCGAATTTGATCCAAGTTTAGATAGTAGTCAACGGATTGCAGTGCTTCAACAGAAATTATCCGATTTACGTAAAACGTATGCTGATGTTAAAGCCGAATTGGCGGCTGTTGAACGACGTAGAAAGAAGATCAAAAGACGAGAACGGGAAGCCCAGAAGGCGTCTAAACAAGAAATGGTTTGTGCATGA
Protein Sequence
MQVDDPPYLSVGTAVSAKYKGAFCEAKVSKVVRIVKCKVTYKMGLGNATVSDEQIKGTLRVGQLVQAKHPDKKEFLDATITKIQDCSQYTVVFDDGDITTLKRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRNRQLKEDSSDGELEEENEPDLEGYQIDIGRVVSVEATDKKRSKDNWFPGLVVIPSAQPTVRINVKDEYLVRSFKDGRYYTVPKKEVSDFNRELAEKVESSVLLEAVQKALKYLDSSELPVHWERSSLFNSQNLETDSEENLTDSSDDEPCEEKDRFVAQLYKFMDEAGTPLNKTPTVNNKDIDLHRLFRIVHKMGGYNRVTNQNKWRSVTLRLHLPNNQNTFNQVKSIFKKCLLSYEAFHRTLGVTMLNHTRSTKKNRGRSLIRDKDRATPVSHSPRPEKEDESGSEKKDEVKETPPPPAVEPAKAPKRKIEVKKDEEKKKKDVGEGSDTNSSDTAEQNELITTNVVSKDTGRPKRSDGKPVKERKPRTPIGEKVKSFVEKLEEPPKKDDDEKFQLTRSKSQTNVKQKEKDSISEKKCETKVRGDGGGTTKPPQQTKLMKKSLDEEKKRGRKRAIPEDKTSNSDSSTTAGDAITPTTPNLNFNIGDKLKVYYGPTHESKVTYEAKVIEIDKDSVPVLYLVHYTGWNTRYDEWVTSNRIAENLSAATKAKRLKQGASQAATTSKTTGQKMPTKRGRGMSITGRTSAPEVPRSTTPSSVTSSSSRTKSPATPATRSTSRLAKSDSTKRNRRTSAQTDVSIHSDSESDLSESETELSRTRSGGKSDESEVKTYKRKVKPAAQSNVKSEKGKEKDDNDIGKDSDSDKQPRRVRKTKISPEKSGEESDDEIVPAKGRDFDLNQIRSELKGFTKALKVPPLDASDKDGITSSDDSNNLVNEKPEEEEKKMKVEEKSCSDDIYEFKEPEPFEFESRPPKLGDDLKKRIVPRVYDDVDKSPQKKKLIKSPEQSDSDSDKKRFKRIPIVKQEDSEDDDNIRLSTMKKEDDPFDKLVESPSYNIRKPLNEKVIEVNSKTVRNIMEEPLFRDVIETNVDEYTKEIILSDSEIQAQNIFTRAGELFSDTYSKNSPDRSTLELEFPLKQYEKLKDSDDNEDDLIREQIERVIQQSSSTDEDSIDALAIRQPTTSYLAKKREDIKVVPIKIEEVIEDKPMDIPQIHIPEIKKDEPLNINVAAFTLVKQITPAIVEVDNTQKILIATKIEEPKKTAIKISDSILQKLNRATIVKEENENTTSDMELEPDIGAQEIKIETPLENKFKTSEQTMPVAEIKVKPEKYQPLNETRKRRKAISRQYILESDTDSSDSEQLIIARSDEDSQTRSLDNKDVKECDSMSQDVPTTDDSQPHPHEERNFKFEEIKKDVPKPATEEIKKDVEPVKEEEPDSQLHSLLLCEETLPRSPAPVPETPVIVEMKPVKTVLEMPFASAPGTSNSTKSMLLEHKSVIKVQTAVQQPRPLPPPPPQPVAPMVLMTVRENRSGNVAAVLDNTPPTTPESSISNLSPRGDNDNLSPNTVDNESCKSNEQENEYLLQRRNSANKVTPYSEEDTQMTGETSAIIKKTREDCTPPVKKRRKSLRGTDEVPTKRGRKPLNRSRHNSDSDDTSEHSNAGSINIGIFDRNQRSPRPSKYNFFVEFDPSLDSSQRIAVLQQKLSDLRKTYADVKAELAAVERRRKKIKRREREAQKASKQEMVCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-