Slut005211.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- grn
- Assembly
- GCA_949319165.1
- Location
- OX439234.1:12182165-12197193[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-20 2.9e-16 59.0 4.7 1 35 223 256 223 257 0.98 2 2 1.9 5.6e+03 -2.7 0.2 26 34 288 296 288 297 0.83
Sequence Information
- Coding Sequence
- ATGTCGTCGAGTAACGTGTGCCGACCCCACTTCCACACGACGCTCCACCCGTGGTTGACAGACACGTCCAAACCTTTGACTCACTCAAACCCATGGGTGCCGTTCAGCAGTGGTGGCGGTGGTGGAGGCGGCGGTGGTGGGGGAGGGGGCGATCCGGACAAGTCGCAGTCGCCTGGATCGCAGACGGCCGCGCAGGCGCACAATCTGTTCAGCTTCCCGCCAACACCTCCTAAAGACAGCACGCCCGACTCGATCGTGCCGACGTCTTCAGGCTCCGGCACCACCAGCGAGTACCAGAACGCCGTGGCGCACGCAATGGGCGTCGCTTTCATGCACCACCCGGACTCCCAGAACGGCGGAGGCAACGGGGCCTGCTCCATGGATGTTAAGCCCTCCGCTGCTAACCTCCTGAGCGCTCAGCAGAACGTCAAACAGCGGGAAGGTACCGATCATTACTCAGATCGAAATAATATAGACAACGGCATGTTTAACTCTTCGGCTTTTGATTCCTCGTCGGCCGCATACCCCGGCTCGTATGTACACCATGGTATACATAACGGCGCTATATATAGCTCTGTCAAGGGGCACGTGACCGCGCCTAGCGCAGCAGCCTCGCCAAACAACAAAGCTAGGAATAAATCCAGAACCAGTGCCGAGGGTCGAGAATGTGTTAACTGTGGAGCGACCAGCACGCCGTTGTGGAGGCGCGACGGAACCGGCCACTATCTATGCAACGCCTGTGGACTCTACTATAAGATGAATGGACAAAACCGTCCTCTTATCAAACCAAAGAGAAGGCTGACACCGAGAATGATGCAAAAACTATTAATCTTTAAATACAGCAGACGTGTTAAAGTGCTGTGTAAACTAAGACACAAAAAAGTAGGTACCTTTAACGATAACTTTACCTCTGAGAACATTATATTATGCTACGCGGACGCGTTTGCCGATTCGTGTGTCGTTTTGCAACAGTTGGAACTTTCTGTAGAATCTTCCGTCGACagttaa
- Protein Sequence
- MSSSNVCRPHFHTTLHPWLTDTSKPLTHSNPWVPFSSGGGGGGGGGGGGGDPDKSQSPGSQTAAQAHNLFSFPPTPPKDSTPDSIVPTSSGSGTTSEYQNAVAHAMGVAFMHHPDSQNGGGNGACSMDVKPSAANLLSAQQNVKQREGTDHYSDRNNIDNGMFNSSAFDSSSAAYPGSYVHHGIHNGAIYSSVKGHVTAPSAAASPNNKARNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTPRMMQKLLIFKYSRRVKVLCKLRHKKVGTFNDNFTSENIILCYADAFADSCVVLQQLELSVESSVDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -