Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439233.1:14495814-14497907[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.61 33 5.4 1.3 2 23 280 302 279 302 0.95

2 9 0.23 12 6.8 1.6 5 23 312 331 305 331 0.89

3 9 0.017 0.9 10.4 6.2 1 23 339 362 339 362 0.97

4 9 7.8e-05 0.0042 17.7 1.0 1 23 408 430 408 430 0.98

5 9 0.0072 0.39 11.5 0.3 1 23 436 458 436 458 0.97

6 9 0.62 34 5.4 1.7 5 23 521 539 520 539 0.95

7 9 9.7e-06 0.00053 20.5 2.3 3 23 547 567 546 567 0.99

8 9 8.4e-06 0.00045 20.7 0.9 1 23 573 595 573 595 0.99

9 9 7.6e-05 0.0041 17.7 0.3 1 20 604 623 604 625 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.61	33	5.4	1.3	2	23	280	302	279	302	0.95
2	9	0.23	12	6.8	1.6	5	23	312	331	305	331	0.89
3	9	0.017	0.9	10.4	6.2	1	23	339	362	339	362	0.97
4	9	7.8e-05	0.0042	17.7	1.0	1	23	408	430	408	430	0.98
5	9	0.0072	0.39	11.5	0.3	1	23	436	458	436	458	0.97
6	9	0.62	34	5.4	1.7	5	23	521	539	520	539	0.95
7	9	9.7e-06	0.00053	20.5	2.3	3	23	547	567	546	567	0.99
8	9	8.4e-06	0.00045	20.7	0.9	1	23	573	595	573	595	0.99
9	9	7.6e-05	0.0041	17.7	0.3	1	20	604	623	604	625	0.95

Sequence Information

Coding Sequence: atggatagtaatgaaataaataattcagaaaCTATGAATTCAAATAACAAAGAAATATCTACTTACACACTGAAAACTCAAATTATAAAGAATTCAACAAAAATAGAAATACGTAaaagtaaaagaaataaaatgaaatgtaaaaaatatatgtactcagataatgaaaataacaatgAACATGCATCAGATGatgattatattgaaaaaacgaaaaagaaaagaaaatacgttaaaaacaataataataaaaataaaaaagtttgtacgattaataaacaaaaacaaatagtaaataaaactaTTCTCGATGATCATGCAGAATCAAGTGATAGTGATGGTATTACTTATGAAgactttttagaattaaaaagGAAAATTAAACAGAAAAGGAaagagaaaattaataaaaaaccaaATATACAGATCAAAGAAGAATTAATAGAAAATGAATTTTATGAACCAAAATTAAAAGATTATGCAGAATACATTAACAAACgtttaaatgaaaatacaaatttagaAGCTTCatctaaaacaaataaaaaggacaaaaaggaaaaattaaaaacagttacCGTTTCTCTCAATATAGAAGAGAATCACAATGCATTTAAAATAGAGTCTACCGATGATACCGTTAAAAATGAACCAGATGAAATTATGGATTCTATATGGTCTGATGCGAAACATTTATCAgatAATTTACTGCAATCAATTCAAAATCCTGAAgaagattttaatttatcagATGACAGCGATGAATCTTATGACTTTTCAAGTGAAAAAGATGTTATAGTCACCAAAAAAAGACAAAGAAATCCAGTGCTAAAAGTTACCTGCAATATGTGTGGACTTGTAGCATCATGTAGAAGTGCTTACAAAACCCACTTACTTAGAAAACATTCACTCGTTTGTGTTTATGGCTGTATTTTATGTGATATGAAATACCATACAAACGAACAATTAATGAAACATCGTCAAGAGTCTCATAAATCTAAGAACGGGTCTGGCTACGACTGTCCTCACTGTACTCGTTCATTATTCCATTTCCATAAACTTATCCGTCATATTCGAAATGTCCATGGAATAGATGTAACAGGACGTGTCGAGTATTATGTAGAAAAATCATCATACAATGTCTTAAATGCAGCGGTCGTATTCAAAACCCCGTTACCAAAACGTAAACCAAGACCAAAAGTACCTCCTAAAAACCACTCTTATGTTTGTCACTTGTGCGGTAAAGTTATCCGTTTTGCTGGGCAATTTAAAGAACACATGCTAAAGCATGAGGACATTAAAAACTATATCTGTGATGTGTGCAGCAAAGCGTTTATTTCAAAACGTATTCTAAGCATTCACAAGAAAATACACGCAGCAGTGACTGATAGAAAATACGTCTGTAATTTCGTACTAGACGAAGGTAACAAAACAGATGAAGTAAAGTCAAAGGTTGAATTTAATACAAATGAATTCAAACCTACTATTACTCAACCTGCAACTAAGAAGCCTCAAGGAATTTCAAGTGCCTATATAACCGTCGACGAAAACGGTAGACGAGTGTGTAAGTTTGCATGCGTGTCCCATTCAGATCTCAGTAAGCATCGTCTGGTACATTTGTCTCTGCGACCACATGGATGCACTCTCTGCGGGGCAAAGTTTCGCCAGAGCGCTCACTTGAAACGCCACATCAAACGGCACGCTGGTGCTAGAGACTTCAAATGCAGCATCTGCAGGGCGGAGTTTGTCACAAAGGATAATTTAAACAATCATGAGAAAACACACTTGCACAAGAATGTGGAACAGATATTTACATGTGAAAAGTGTAGTAGGACATTTGGACAGAGAGCTCAGTTGATGAGGCATATTGTGAGGTGTAATGTTGTTTTAAATACTAATGAGAATTTAACCGTTAATGTACATGACGGTTTGGCAATGAATAGTTCGCATGCACAAATGATAGATCAAGTTATTATAATGACTGACCAACCTCAAATTAATTTGCAAAATACAAATGTAATTAATTGA
Protein Sequence: MDSNEINNSETMNSNNKEISTYTLKTQIIKNSTKIEIRKSKRNKMKCKKYMYSDNENNNEHASDDDYIEKTKKKRKYVKNNNNKNKKVCTINKQKQIVNKTILDDHAESSDSDGITYEDFLELKRKIKQKRKEKINKKPNIQIKEELIENEFYEPKLKDYAEYINKRLNENTNLEASSKTNKKDKKEKLKTVTVSLNIEENHNAFKIESTDDTVKNEPDEIMDSIWSDAKHLSDNLLQSIQNPEEDFNLSDDSDESYDFSSEKDVIVTKKRQRNPVLKVTCNMCGLVASCRSAYKTHLLRKHSLVCVYGCILCDMKYHTNEQLMKHRQESHKSKNGSGYDCPHCTRSLFHFHKLIRHIRNVHGIDVTGRVEYYVEKSSYNVLNAAVVFKTPLPKRKPRPKVPPKNHSYVCHLCGKVIRFAGQFKEHMLKHEDIKNYICDVCSKAFISKRILSIHKKIHAAVTDRKYVCNFVLDEGNKTDEVKSKVEFNTNEFKPTITQPATKKPQGISSAYITVDENGRRVCKFACVSHSDLSKHRLVHLSLRPHGCTLCGAKFRQSAHLKRHIKRHAGARDFKCSICRAEFVTKDNLNNHEKTHLHKNVEQIFTCEKCSRTFGQRAQLMRHIVRCNVVLNTNENLTVNVHDGLAMNSSHAQMIDQVIIMTDQPQINLQNTNVIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343462;
90% Identity: -
80% Identity: -