Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439233.1:14444068-14448313[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2e-06 0.00011 22.7 3.3 2 23 542 564 541 564 0.97

2 7 0.00065 0.035 14.8 1.0 1 23 569 591 569 591 0.97

3 7 3.9e-06 0.00021 21.8 0.6 1 23 597 619 597 619 0.97

4 7 0.0011 0.058 14.1 1.1 2 23 627 648 626 648 0.96

5 7 0.002 0.11 13.2 2.4 1 23 654 676 654 676 0.97

6 7 2.3e-08 1.2e-06 28.8 0.5 1 23 682 704 682 704 0.98

7 7 0.00017 0.0094 16.6 2.5 1 23 711 734 711 734 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2e-06	0.00011	22.7	3.3	2	23	542	564	541	564	0.97
2	7	0.00065	0.035	14.8	1.0	1	23	569	591	569	591	0.97
3	7	3.9e-06	0.00021	21.8	0.6	1	23	597	619	597	619	0.97
4	7	0.0011	0.058	14.1	1.1	2	23	627	648	626	648	0.96
5	7	0.002	0.11	13.2	2.4	1	23	654	676	654	676	0.97
6	7	2.3e-08	1.2e-06	28.8	0.5	1	23	682	704	682	704	0.98
7	7	0.00017	0.0094	16.6	2.5	1	23	711	734	711	734	0.95

Sequence Information

Coding Sequence: ATGACAAGTAATTCTACATGGATTTATCCACCGAGAGAAACTGTAGAACCATTAAACACAGATACATCAAATGAAACAGTTGATGAGACAAATAATGAAGAAATCAGTAAAGAAAATATGATGGAAAATCAAATGGATATAGACGACACAGTTAGATATGTAGATGGCAATGAATTTGTATTGAACACAGGTGATATGATCCCTAATGatcatataataattttacatgGACGGAAACAATTTCTCGTAAGAAACGATCAGATTAACGAGAATGGAGAAATTGTATTAAAAGAAGAAAATgCAATTGAAGGTTTTGTTTATGAAAATGAACATCCATCTGTTGATGAATCAATGGCAGATATTTTACCAGAAGAAAATTTAGAAATACTCCAAGGAAAAAATGATCAGAATAGTGAATATGATTATCAAGAAGAATATTTGGAAGACGAGGATGAAGAGAGAGACACCAATATGGAGGTGTGGGAACAATTCGCTGGGAGTGATGTGACAGAACAGACATCTGAATATAGCGGagGTGACGGTTGTTTGGTTGTAGTTGACGATGGTGAAATTGAAAATGCTATTACCAATGTGGAGGAAGTACTGAACGCCGATCATTACAACATTTTACAACAGATCCCTGAAGGCAGTGAGAATAAGTTGTATGCGATATTGAAAGACGGTAAGCTGCATATTCAAGAAGGCAACGTCTCAGAAAGCTCTTTGATTACAGATTGTGAACAGAGAACTAATTTTGATACTGCTTTTCAAACTGGAATTGCATgCAGCGAACAAGAAGTAGGATCAGGTGTGGAGTTAGAGAGACCAGTAGCTGGTAAAAACTTACTTACTGGACAGACCATTTCACTGGAAGCATTTTTATCAAAGATGGCTGCACgagataaaaatttcaaatacgaTGCTAAGAATGTGAGAATAAAACAAGAACCAGGTGTGACGcctttttttccaaaaaaaattactgttgGACATACAACTTCAGGGAAGAAAATTGTCGGTAAAATTCTGCAGATAAAGCGGCCTGGACAAGATAACAATCAAGAATTTAAACAAGACTTCACTGCTTTATCGCCAAATACTGCAGAATCTGAACATAAACTAGATTTACAAGCAACTAGTTCAGACAGTGAAGTCAACACGTCCCACACTGACACTAGCGGAATTTTGATGGACGATGTAGAAACGTCAGGTGACCCTGACCAGTTAACTGTTCGGACACTGTGTGGTTTAATGGAGCTGGAATCTGTGAGACAGAGTTTAATCAATCGTCGCATTTTGGTGCGGAGAGTGTTTAAACGTATTCATAGCCAAACGCGGGCGCTCATGGAAAAGTCTGTTAAGTTTTATAAAGgcatgtttaaaaaatttgaagaagTCAAATGTGAAGATGGAGAAACACTATCGTGGAGTTTTATACCATATGAAGGTGATGATGTAGAAGAACCGTCGACATCAGCAAATGATCAACCAAGAGTAACGGTGAAGAGCTTTGCTAATATAAGTGAATTGAACAAAGCTGTGCTAACACTCACTGTTATTGAGGATGAAGATGggaataaacaaacaaaagttAACATTCCTGATATGGataaaactgcaaaaaaatGTACGACCTGCCAAAAACAATTCAGATCACAGAGTCTTTTAAGAAGACACCTCCGTACTGCCCATGACGCCCGATTGTTTGAATGTGATCTTTGTATGAAACGTTTCATTGATGCGTCCACACTAGCGAGACATCGTCACATTCATAGCGGAGATAAGAACCACCAATGTGACATGTGTCCTAAGGCCTTTAATACAGCTGGTTCGTTAAAAAGGCATGTAACAGTACACAACCCAAATTTAAGACCATTACAGTGTTTAACATGTATGCAAAGGTTTACAGATGAATCaagtttaaaaaaacacatgctattacatactggtttGAAACCATTTGAATGTGACATATGTTTTAAACGATTTGTACATAGTGGAGATTTAAATTTTCACCGGAAGATTCACGATCCGAGTAAGAGATATTCATGTGAAACTTGTGGAAAAGAATTTAGCCGGCAAAGTAATCTAGTACGGCATATGGATATCCATAAAGATAACGGAAATGCATTCAAaTGTGAAATCTGTGGCTGTTCTTATAATTTTATGAGTTCTTTAACTAGGCATATTGTTAGTTTCCATATGAAAGattcataa
Protein Sequence: MTSNSTWIYPPRETVEPLNTDTSNETVDETNNEEISKENMMENQMDIDDTVRYVDGNEFVLNTGDMIPNDHIIILHGRKQFLVRNDQINENGEIVLKEENAIEGFVYENEHPSVDESMADILPEENLEILQGKNDQNSEYDYQEEYLEDEDEERDTNMEVWEQFAGSDVTEQTSEYSGGDGCLVVVDDGEIENAITNVEEVLNADHYNILQQIPEGSENKLYAILKDGKLHIQEGNVSESSLITDCEQRTNFDTAFQTGIACSEQEVGSGVELERPVAGKNLLTGQTISLEAFLSKMAARDKNFKYDAKNVRIKQEPGVTPFFPKKITVGHTTSGKKIVGKILQIKRPGQDNNQEFKQDFTALSPNTAESEHKLDLQATSSDSEVNTSHTDTSGILMDDVETSGDPDQLTVRTLCGLMELESVRQSLINRRILVRRVFKRIHSQTRALMEKSVKFYKGMFKKFEEVKCEDGETLSWSFIPYEGDDVEEPSTSANDQPRVTVKSFANISELNKAVLTLTVIEDEDGNKQTKVNIPDMDKTAKKCTTCQKQFRSQSLLRRHLRTAHDARLFECDLCMKRFIDASTLARHRHIHSGDKNHQCDMCPKAFNTAGSLKRHVTVHNPNLRPLQCLTCMQRFTDESSLKKHMLLHTGLKPFECDICFKRFVHSGDLNFHRKIHDPSKRYSCETCGKEFSRQSNLVRHMDIHKDNGNAFKCEICGCSYNFMSSLTRHIVSFHMKDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343398;
90% Identity: iTF_01343398;
80% Identity: -