Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439237.1:12864041-12870969[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.2 11 7.0 0.1 2 23 202 224 201 224 0.95

2 10 0.024 1.3 9.8 1.9 1 23 230 253 230 253 0.94

3 10 2.7e-06 0.00015 22.3 3.0 3 23 264 284 262 284 0.95

4 10 1.6e-05 0.00087 19.8 4.1 1 23 290 312 290 312 0.98

5 10 3.9e-05 0.0021 18.6 2.5 1 23 318 340 318 340 0.98

6 10 4.3e-07 2.3e-05 24.8 0.5 1 23 346 368 346 368 0.98

7 10 3.9e-07 2.1e-05 24.9 2.2 1 23 425 447 425 447 0.99

8 10 3.3e-07 1.8e-05 25.1 1.1 1 23 453 475 453 475 0.96

9 10 3.3e-05 0.0018 18.9 0.9 1 23 481 503 481 503 0.98

10 10 0.0012 0.063 14.0 2.9 3 23 510 530 509 530 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.2	11	7.0	0.1	2	23	202	224	201	224	0.95
2	10	0.024	1.3	9.8	1.9	1	23	230	253	230	253	0.94
3	10	2.7e-06	0.00015	22.3	3.0	3	23	264	284	262	284	0.95
4	10	1.6e-05	0.00087	19.8	4.1	1	23	290	312	290	312	0.98
5	10	3.9e-05	0.0021	18.6	2.5	1	23	318	340	318	340	0.98
6	10	4.3e-07	2.3e-05	24.8	0.5	1	23	346	368	346	368	0.98
7	10	3.9e-07	2.1e-05	24.9	2.2	1	23	425	447	425	447	0.99
8	10	3.3e-07	1.8e-05	25.1	1.1	1	23	453	475	453	475	0.96
9	10	3.3e-05	0.0018	18.9	0.9	1	23	481	503	481	503	0.98
10	10	0.0012	0.063	14.0	2.9	3	23	510	530	509	530	0.98

Sequence Information

Coding Sequence: atgacTTCATTAAAAAAGTGTAGGGCGTGTTTAAAAACTATAACCGAAAAAATGACTGTTCCTTTacacaacaaaataaaatacgcTAATAAATTATGTCTTGTTTCGGAAATGCTAATGGAGTGCACAGCCGTTCATatttcACAAGATGATGTTCTCCCTCAACAAATATGTGTCCGTTGTGTGAATACTTTATTTGTttcatacaaattcaaaatgatGTGTGAAAAATCAGAACAGGTACTTTTAGGTCATCATTCTCAAATAACAAGCGAAcgtaaagaaaataaaagtgacgtgataaaaaatactgaaaaacacACATTACCCCGTCAAACAACAAACTTAAgcaataatgtgaaaaaaattattaaaagaatTAACGAAACAAAAAGAGTCAAAATCAAACGAACGATCGACCCAAAACCAGAAGAAATCAAAACAGAAGATATTAGTGATGATAATAACGATAACGAGGATGATGATACAACTGAACCAGAAAAACTGCCCCCTACTGATCTACCGGAAAttgtaaaaaagaaaatcgagaGGTTGAAACGACAAAAGGGAAAACGCAGCTgccattttaaatttcattcagGAAAATGTGAATTATGTGTTGCTGAATTCACCCAAACAGCAGAATTAAGATTTCACATGAAAGAGGCACACGACATGGTGGATAGGTTCATCTGTAGATACTGTCGTAAGAACTATTACATTAAAGAAAATATGGAATGGCACATGGAGCACGAACACACTGAAGAAGAGAAGAGAAGACCCCACTTATGCCCACACTGTGGCAAGGACTTTGCAAATGCACAAAACTTGAAGAGACACTTGTTCACTCACTCTAAAGAAAAACCCTTTGAATGTCAACAGTGTGGAAAACGGTTTTCGCAAAGGCCTCATTTGCACTCGCATCTAATCTCACATAATGGAAATCCAAAACACGTGTGCCCAGTTTGCGGACACAAGTTCCTACGGTCTGGTAGCTTAACGACACACATGCGGTCGCACACGGGTGAAAAGAACTACCAGTGCACTGTGTGTGGGAAACGATTCAGCTCTAATGGCCTTCTCAAAGAACATACGTTGATTCATACTGGTACGGTATCAAAAACTTTAAATGTGACTTTTGTGGGCGATGTTTCACAAGAAAATGCCAGCTTGTTGTTCATCGGAAAATACATACAGGTGAAAAAACAAAAGTCTGTGAACTATGCGGAGCTAGCTTTATACACGCAAATCAGTCATGCAGGAGTACGCAAATTCAAGTGCGTTCAGTGCGAAAAAACATTTACACGCAATAATAATCTACTGGAACACATGAAAACACATACAAATGAGAGAAAACATCCGTGCCCTATTTGCGACAAGAGGTTCAGAGATAAATCAGAAATGAAGAGACATCAAGTTGTACATACAGGTGCTAAAGATTTCCAGTGCGAAACTTGTGGCAACAAATTCAGTCAAAAAAAGGCATTGGTAGTTCACAAAAAAATACACACGGGGGAAAGGAAGTTTTGTCATATTTGTGGCGCTGGGTTCATTCAGAACGTCTGCCTTAGAATGCACTTGAAGAAACACGAACAGCAGAAGATATAA
Protein Sequence: MTSLKKCRACLKTITEKMTVPLHNKIKYANKLCLVSEMLMECTAVHISQDDVLPQQICVRCVNTLFVSYKFKMMCEKSEQVLLGHHSQITSERKENKSDVIKNTEKHTLPRQTTNLSNNVKKIIKRINETKRVKIKRTIDPKPEEIKTEDISDDNNDNEDDDTTEPEKLPPTDLPEIVKKKIERLKRQKGKRSCHFKFHSGKCELCVAEFTQTAELRFHMKEAHDMVDRFICRYCRKNYYIKENMEWHMEHEHTEEEKRRPHLCPHCGKDFANAQNLKRHLFTHSKEKPFECQQCGKRFSQRPHLHSHLISHNGNPKHVCPVCGHKFLRSGSLTTHMRSHTGEKNYQCTVCGKRFSSNGLLKEHTLIHTGTVSKTLNVTFVGDVSQENASLLFIGKYIQVKKQKSVNYAELALYTQISHAGVRKFKCVQCEKTFTRNNNLLEHMKTHTNERKHPCPICDKRFRDKSEMKRHQVVHTGAKDFQCETCGNKFSQKKALVVHKKIHTGERKFCHICGAGFIQNVCLRMHLKKHEQQKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -