Basic Information

Insect: Sialis lutaria
Gene Symbol: Suv3
Assembly: GCA_949319165.1
Location: OX439233.1:33908182-33914247[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.2e-06 6.7e-05 23.3 1.2 1 23 90 113 90 113 0.98

2 14 5.7e-06 0.00031 21.3 1.6 2 21 123 142 122 143 0.94

3 14 9.6e-05 0.0052 17.4 0.2 1 20 167 186 167 188 0.95

4 14 0.027 1.5 9.7 0.0 1 21 206 226 206 227 0.94

5 14 0.055 3 8.7 1.4 1 23 237 260 237 260 0.97

6 14 2.5e-05 0.0014 19.2 4.1 1 23 278 300 278 300 0.98

7 14 0.0026 0.14 12.9 0.1 1 23 307 332 307 332 0.97

8 14 4.2e-06 0.00023 21.7 0.8 2 23 345 366 345 366 0.97

9 14 1.8e-06 0.0001 22.8 0.6 3 23 374 394 372 394 0.96

10 14 6.6e-07 3.6e-05 24.2 0.9 1 23 400 422 400 422 0.98

11 14 0.0071 0.39 11.5 0.0 3 23 430 451 429 451 0.95

12 14 1.7e-05 0.00094 19.7 3.9 1 23 457 479 457 479 0.96

13 14 3.8e-06 0.00021 21.8 4.9 1 23 485 507 485 507 0.98

14 14 0.037 2 9.3 6.4 2 23 514 535 513 536 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.2e-06	6.7e-05	23.3	1.2	1	23	90	113	90	113	0.98
2	14	5.7e-06	0.00031	21.3	1.6	2	21	123	142	122	143	0.94
3	14	9.6e-05	0.0052	17.4	0.2	1	20	167	186	167	188	0.95
4	14	0.027	1.5	9.7	0.0	1	21	206	226	206	227	0.94
5	14	0.055	3	8.7	1.4	1	23	237	260	237	260	0.97
6	14	2.5e-05	0.0014	19.2	4.1	1	23	278	300	278	300	0.98
7	14	0.0026	0.14	12.9	0.1	1	23	307	332	307	332	0.97
8	14	4.2e-06	0.00023	21.7	0.8	2	23	345	366	345	366	0.97
9	14	1.8e-06	0.0001	22.8	0.6	3	23	374	394	372	394	0.96
10	14	6.6e-07	3.6e-05	24.2	0.9	1	23	400	422	400	422	0.98
11	14	0.0071	0.39	11.5	0.0	3	23	430	451	429	451	0.95
12	14	1.7e-05	0.00094	19.7	3.9	1	23	457	479	457	479	0.96
13	14	3.8e-06	0.00021	21.8	4.9	1	23	485	507	485	507	0.98
14	14	0.037	2	9.3	6.4	2	23	514	535	513	536	0.90

Sequence Information

Coding Sequence: ATGCTTTTGGAATGTACTTCTGTACATgtTTCATCAACAGATATATTACCTACGGTAATATGtgaaaaatgtgcattattgataataaattattacgattttaaaataatgtgtcGAGAAACACAAAAAAAGTTAGAAGAAATCAttacagaaaataataaaatagaattacCTAATGAAAATGTCGATAATTTTATCGAAAATGATTCAAATACACAAGTATGTGATAGAGAATTACAAACCGTGAAAGACATACCAAATTATCTGTTCAAATGTAAAGAGTGTGACAAATCATTTAGATTagaaacaaatttaataaaacacattaaTCGTATACATTCAAAAAACATCAgagagaaaatattaaaatgtaattattgtaATCGAACTTTTAAGTctaaaataaatctgaaaaaacaTATAAACCAAGATAAATGTACTGAAAATCAAAAAGAGATACAATTTGCTTGTAAAACGGATGAAGAAGTACTAAAAGAATATAGTTGtcaagtttgtaataaaatattttcatcaaaagcAGATTTACGTATACATACAACCAATTCCGATTGTGCTAAAATAAAGAAAGAACCGACTGTTAAAGAACTTAAAGAATATATGTGTCCTTCATGTTCAGATATGTTCACGACGATGGCCAATTTACGTACACATATTATCATTTGCAAACAAAAAGATAACGAAGAAATACATAAATGCCAGATCTGTTTATCAAAGTTTCAAAACGAGAATGATTTACAGgatcatattttaaaagaacATAACGGAAGAGTGGATGACAATGATGCGTATCCAAATCAAGAAACCAAAGAATTTATTTGTAAACTATGTAAACGTTCATATCGGAAACAAAGTAACTATACACGTCATTTACAGACTCATCTTGGAGAGGATCGTAAATATAAATGTTCTTATATAGACTGTGATGCCAGATTCAGCACTGCATGGGCATTATCCGAGCATGAGAAAGTAGCACACACTGACGCCATGATGTCAGAAAAACAATCCAAACCTACATGTGATAAATGCGGGAAGGTATTCGAACAGAACAAATATCTGATGAAACATATGTACGTACACTCAGAACAGAGGCCCCATTTGTGTACAGTCTGTGGTAAGGCTTTTTCTTTGGCTGGAAATCTTAAATCGCACATGCGTATCCATTCGGGAGAGAAGCCATACGTTTGTAAGACTTGTAACCGTGCATTCAGCCAGTGGTCATCGTTGAGGTATCACATGAGCGTTCATAAAGACAAGAGAGACAATGTGTGTGCAGCTTGTGGATTAGCTTTTGCACGGAGGTACTCTATGTTGGCGCATGTCAGGACGGTACATATGGGCGAGAGACCACATTGTTGTTCTATATGTGATAAGAAGTTCTCAACATCAAATGCTTTGAAAACACATATGGCCGTTCATTCAGgtGTGAAAGATCATAAATGTGATTATTGTGGAAAAACATTTGGACGGTCGTATCATTTGAAAGTTCACGAAATGACCCATACAGGAGAACGCCCACACATATGTATTGACTGTGGCCAGAGTTTTATACAATATCACTGTCTGACTGCACATGTTCGGAAACATCACCACAATCAATCTCAGTCTCAAACAGTAAACAAAAGAGTTGTTTGTGCAACTTATCGAGGGAAAAAAGATGATTCTTCAAATTTATCATCACTTTTTGTTCCTGTAACCGTAAAACCAAATTCAGATGATATTAATGTAGGTGCTGAATTAGCTGGGACTTTTAAGAAAGccgatttattgaaaatattaaataaattttatcaaaagaaagaaattaaatttttatgcgCAGAAAATGGTTTAGATAATTATTTACAGCATGAAGCATACGTAAGCTTCAGGCGATTTTGTTTAGAAGCAGACACACTACCAGTAGATCTTCATGTCGTCATAAGTGATATTTTACAAGGCGCAGGTCATGTTGATGATATATTTCCATACTTTCTACAGCATTCAAAACAGATATTTCCTCATTTAGAATGTATGgatgatttgaaaaaaatatctgaCTTAAGAACTCCAGCTAATTGgtatccaGATGCGAGAAGTATTACTAGAAAAATAGTATTTCATGCCGGACCAACAAATTCAGGCAAAACGTATCATGCATTGGAAAGATTGATGTCGGCAAAATCCGGGGTGTATTGTGGTCCATTAAAGTTATTAGCAAACgaagtttttaataaatgcaATGAAAGAGGTACACCTTGTGATTTAGTAACAGGAGAAGAAAGGCGCTATGCTAAAGATAATGGAAATCCATCTAGTCATGTATCGTGTACGGTGGAAATGACTTCTATCAATACACCatACGAAGTAGCAGTAATAGATGAAATACAAATGATGAGAGATCCGGGACGGGGTTGGGCATGGACAAGAGCTCTACTAGGACTTGTTGCTAATGAAATTCATTTGTGTGGAGAAGCAGGGGCTATAGAATTAGTACAACACATATGTTCGACGACAGGTGAAGACGTTGAAGTTCGTAAATATAAACGGTTAACTGAATTAACAATAGAAGACAGTGCGTTGTGTAGTTTAGATAGAGTTCAACCTGGAGATTGCatagtttgttttagtaaaaatgATATATACTCGGTATCGAGAGAAATCGAGGCCAAAGGAAGGGAAGTAGCTGTTATTTACGGTGGTTTACCGCCAGGCACTAAATTAGCACAAGCAAATAAATTTAACGATATTGATAATAGCTGTAAAGTTTTGGTTGCTACAGATGCTATTGGCATGGGTCTTAacttgaGTATCCgtcgtattatattttattcattgatAAAACCGTTTGTCAATGAAAAAGGTGAGAAAGAAATGGACACGATATCTGTTTCTGCAGCTTTGCAAATAGCTGGTCGGGCTGGTCGATATGGAACTCAATGGGAGCAAGGTTTTGTAACAGCATATAAACCAGAAGATCTACCGACTTTGAGAAACATTTTGTCTCAGAGTCCTGAGCCAATCATTAGAGCTGGTTTACATCCAACAGCTGATCAAATTGAATTATACGCATACCATTTACCGAATTCTACTCTTAGTAATCTCATggATATTTTCGTTAGTCTATCGACAGTGGATGATTCTTTATACTTTATGTGTAATACAGAAGATTTTAAATTCCTTGCAGATATGATACAACATGTTCCTTTACCTCTACGAGCACGATATGTTTTCTGCTGTGCtccgattaataaaaaaatgcctTTTGTTTGTACGATGTTTTTAAAGtttGCCCGACAATACAGTAAAAATGAATCAATCACGTTTGATTGGTTATGCCGAAATATAGGTTGGCCTTTCCAATCGCCAAAGACAATAATTGATTTAGTACATTTGGAAGCAGTGTTTGACGTACTTGATTTATATTTATGGTTTAgttATCGATTTTTGGATTTATTTCCTGACGCCAATTTGGTACGAGATATGCAAAAGGAATTAGATATTATAATTCAGCAAGGTGTATTTCAGTTAACGAGATTGTTAAAGAATTCTGAAACAGGTGTTAGTTCAGGAGCTGCAGCGGCTCCTGATGAAGATCATTTTACTATTAGTCgtcaaaaacagaattatttaaaagaaccgAATATTAGAAGTAACATGAGAGGTTCAGCTATAGGAAGAGGAAAGTTAACAGAACGCTTATTAGCACAAGGTCTTTTGACCCCAGCCATGTTACAAGAGTTAAGGAATGAATGGGATCAAGGAAAAAGTCCATATAGTAGTGATGACGAACCTAGACCTCCTACGAATTCTTCTAAGAAATTGAgacgaaagaaaaaaaaatag
Protein Sequence: MLLECTSVHVSSTDILPTVICEKCALLIINYYDFKIMCRETQKKLEEIITENNKIELPNENVDNFIENDSNTQVCDRELQTVKDIPNYLFKCKECDKSFRLETNLIKHINRIHSKNIREKILKCNYCNRTFKSKINLKKHINQDKCTENQKEIQFACKTDEEVLKEYSCQVCNKIFSSKADLRIHTTNSDCAKIKKEPTVKELKEYMCPSCSDMFTTMANLRTHIIICKQKDNEEIHKCQICLSKFQNENDLQDHILKEHNGRVDDNDAYPNQETKEFICKLCKRSYRKQSNYTRHLQTHLGEDRKYKCSYIDCDARFSTAWALSEHEKVAHTDAMMSEKQSKPTCDKCGKVFEQNKYLMKHMYVHSEQRPHLCTVCGKAFSLAGNLKSHMRIHSGEKPYVCKTCNRAFSQWSSLRYHMSVHKDKRDNVCAACGLAFARRYSMLAHVRTVHMGERPHCCSICDKKFSTSNALKTHMAVHSGVKDHKCDYCGKTFGRSYHLKVHEMTHTGERPHICIDCGQSFIQYHCLTAHVRKHHHNQSQSQTVNKRVVCATYRGKKDDSSNLSSLFVPVTVKPNSDDINVGAELAGTFKKADLLKILNKFYQKKEIKFLCAENGLDNYLQHEAYVSFRRFCLEADTLPVDLHVVISDILQGAGHVDDIFPYFLQHSKQIFPHLECMDDLKKISDLRTPANWYPDARSITRKIVFHAGPTNSGKTYHALERLMSAKSGVYCGPLKLLANEVFNKCNERGTPCDLVTGEERRYAKDNGNPSSHVSCTVEMTSINTPYEVAVIDEIQMMRDPGRGWAWTRALLGLVANEIHLCGEAGAIELVQHICSTTGEDVEVRKYKRLTELTIEDSALCSLDRVQPGDCIVCFSKNDIYSVSREIEAKGREVAVIYGGLPPGTKLAQANKFNDIDNSCKVLVATDAIGMGLNLSIRRIIFYSLIKPFVNEKGEKEMDTISVSAALQIAGRAGRYGTQWEQGFVTAYKPEDLPTLRNILSQSPEPIIRAGLHPTADQIELYAYHLPNSTLSNLMDIFVSLSTVDDSLYFMCNTEDFKFLADMIQHVPLPLRARYVFCCAPINKKMPFVCTMFLKFARQYSKNESITFDWLCRNIGWPFQSPKTIIDLVHLEAVFDVLDLYLWFSYRFLDLFPDANLVRDMQKELDIIIQQGVFQLTRLLKNSETGVSSGAAAAPDEDHFTISRQKQNYLKEPNIRSNMRGSAIGRGKLTERLLAQGLLTPAMLQELRNEWDQGKSPYSSDDEPRPPTNSSKKLRRKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343381;
90% Identity: -
80% Identity: -