Basic Information

Insect: Sialis lutaria
Gene Symbol: -
Assembly: GCA_949319165.1
Location: OX439235.1:6070797-6073584[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2e-05 0.0011 19.5 3.7 1 23 224 246 224 246 0.98

2 11 1.6e-06 8.5e-05 23.0 2.8 1 23 252 274 252 274 0.98

3 11 6.6e-08 3.6e-06 27.4 2.0 3 23 282 302 280 302 0.96

4 11 2.4e-05 0.0013 19.3 1.0 1 23 308 330 308 330 0.98

5 11 1.5e-06 8.1e-05 23.1 0.3 1 23 336 358 336 358 0.98

6 11 0.00036 0.019 15.6 0.8 1 23 364 386 364 386 0.96

7 11 7.4e-07 4e-05 24.1 1.5 1 23 392 414 392 414 0.97

8 11 6.2e-06 0.00034 21.1 0.1 1 23 420 442 420 442 0.99

9 11 3.9e-06 0.00021 21.8 1.9 1 23 448 470 448 470 0.98

10 11 1.1e-05 0.0006 20.4 0.3 1 23 477 499 477 499 0.95

11 11 1e-06 5.7e-05 23.6 0.5 1 23 505 527 505 527 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2e-05	0.0011	19.5	3.7	1	23	224	246	224	246	0.98
2	11	1.6e-06	8.5e-05	23.0	2.8	1	23	252	274	252	274	0.98
3	11	6.6e-08	3.6e-06	27.4	2.0	3	23	282	302	280	302	0.96
4	11	2.4e-05	0.0013	19.3	1.0	1	23	308	330	308	330	0.98
5	11	1.5e-06	8.1e-05	23.1	0.3	1	23	336	358	336	358	0.98
6	11	0.00036	0.019	15.6	0.8	1	23	364	386	364	386	0.96
7	11	7.4e-07	4e-05	24.1	1.5	1	23	392	414	392	414	0.97
8	11	6.2e-06	0.00034	21.1	0.1	1	23	420	442	420	442	0.99
9	11	3.9e-06	0.00021	21.8	1.9	1	23	448	470	448	470	0.98
10	11	1.1e-05	0.0006	20.4	0.3	1	23	477	499	477	499	0.95
11	11	1e-06	5.7e-05	23.6	0.5	1	23	505	527	505	527	0.98

Sequence Information

Coding Sequence: aTGGCATTAAATTTTACTTCTGTACAAACTGATAAAATCTGCCGAACATGTTTAACTGAAGAAGGAGACATGAAATCAGTATTTACCGATGATGAATCCATAAGCCAAACATCAGGCCAATGTAATTTACAACTTTTTGAAATGTTAATGTCGTGCGCTTCTGTACATATATCGGAAGGTGATGGTTTACCAGAACAAGTTTGTATGCAATGTGTTCATTATATTACCAGAGCTTATTCTTTTAAACAATTATGTGAACGTTCAGATAACACCTTAAGACAACTTCTGGGTAAACAGATATTACCATTAATTCCGTCAAACGATTCAGCAGAATTAAAAGACGAACTGGTACTTGATCCAATGGGTGTAGTTACGACTGATATAACAGATTTAGATAATTTAGACAAATCATATGACTATTTAAAATGTGAAAATGATATGAAAAATGAATTCAAAGAAGAAAACATGGATTGTGACGATTGGAGAgAAAAAGATACATCTTATCTTAAACCAACGGATGAAAAATCCACAGATGATAAAGGAATACTCTATAAAATTTTAGCTGTTGATGTACCAGATGTAAATTGTGATCTAACCAATGAAGCAAATAAATCTGAAACAAAACCTGGAAAAAAACGGAAAGCTAAAGACGATTGGGAACAACCTATTTATGCTTGCAGTGAATGTACAAGATGCTTCACTACTTTCTCTGACTTGAAAGCCCATTCTAAAACACATCCCaaaacaaataaacacacaTGTAAAGTTTGTGATCAAGCTTTTGCAAGTGCTAGTACATTATGTCGACATATGAAGGTGCACGAGGGTGCCAGACGTCATCTATGCTCCGAGTGTGGCAAAGGCTTTACTCGTTCTGACGACCTGACCCGCCACTTACGGACGCATACCGGAGAGAAGCCGTTCTCATGCAGCATATGCAGGAAGTCGTTTGCCCAATCGTTCCGGTTGCTCGAGCACATGCGAGCGCACGCCGGCGAGAAAGGGTTCGTCTGCGCGACGTGTGGTAAAGCGTTCAGCCGGTACACAAGCATGGCTGCTCACATGAAGACCCACAGCGGAGTAAAGACACATGCATGTGATGTATGCGGGAAGAgATTATGTGGTTCTGGATCTTTAGCGATGCATATGAAAATTCACACAGGTTTAAAAGATCACATTTGTTCATTTTGTGGGAAGGGATTCACAACGTCCAGTAATCTTATCATACATAAAAGAATTCATACAGGAGAAAGACCATATGTTTGTAGTCAATGTGCAAAAGGTTTCCCAGACCCGTCTCGCTTAACGGTCCACATGCGTTCGCATAGTGGAGAGAAACCTTACATATGTACCGTATGCTCACGTGGCTGCGTCAGCTCATCACAGCTCAAGAAACACATGCGCATACACACGGACGAGAGACCGAACTTTGTGTGCATTGAGTGCAATAAGGGCTTCTACCAGGCGTCCACGCTTAAAGTGCACATGAGAATTCACACGGGAGAGAAGCCGTATAGttgtaatatatgtaataagTCGTTTTCACAGACGGGCCCTTTGTCAGCACACATGAAATCACATTGA
Protein Sequence: MALNFTSVQTDKICRTCLTEEGDMKSVFTDDESISQTSGQCNLQLFEMLMSCASVHISEGDGLPEQVCMQCVHYITRAYSFKQLCERSDNTLRQLLGKQILPLIPSNDSAELKDELVLDPMGVVTTDITDLDNLDKSYDYLKCENDMKNEFKEENMDCDDWREKDTSYLKPTDEKSTDDKGILYKILAVDVPDVNCDLTNEANKSETKPGKKRKAKDDWEQPIYACSECTRCFTTFSDLKAHSKTHPKTNKHTCKVCDQAFASASTLCRHMKVHEGARRHLCSECGKGFTRSDDLTRHLRTHTGEKPFSCSICRKSFAQSFRLLEHMRAHAGEKGFVCATCGKAFSRYTSMAAHMKTHSGVKTHACDVCGKRLCGSGSLAMHMKIHTGLKDHICSFCGKGFTTSSNLIIHKRIHTGERPYVCSQCAKGFPDPSRLTVHMRSHSGEKPYICTVCSRGCVSSSQLKKHMRIHTDERPNFVCIECNKGFYQASTLKVHMRIHTGEKPYSCNICNKSFSQTGPLSAHMKSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01343277;
90% Identity: iTF_01343277;
80% Identity: -