Basic Information

Gene Symbol
-
Assembly
GCA_949319165.1
Location
OX439232.1:19611968-19615567[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.0018 1.5 9.2 0.2 22 44 62 83 37 85 0.86
2 2 1.3e-05 0.011 16.0 0.4 13 45 151 184 148 185 0.79

Sequence Information

Coding Sequence
ATGAACGACCAAATATTGTATGAAAGTATAACAgatatgaaaaaatacattatagaTTTAACAAAAGAATTACacATAGAAGAAACTTATGGACTAGTAGGGAATGAATTAGAATTAATTGCTCTTATTAGGCATTGCCCTTGGTTATATAATAGGCAGCTGCGTGCTGATAAATTAGAAGTTACGTGGATGGCGATTGCAGATGTTATGAACGCTTCTGTGACCGAGTGTCAGTCACGTTGGCGACATTTAAGAGAATCTTACgcgaaagcaaaaaaaaatgcgGAACATGGTATACAGGATAgttttcattttgaattttatggaGATATGGAATTTTTAAGACCTTATGTCAAACACCGCACTAGAATAATCGATGAGTCCAAGAAATCAATGGATTTGTCACTAATAAATTTGGTTAGGATAAATCCTATTGTCTATAATCATTTTGTGGATGGTTTTAGAACATCTAAAAAGGATGAAACATGGAAAAATATAGCCAAAGAATTAAATTGCACagtTAAAGAATGTCAATTGAGATGGAAAACGTTACGAGAAAGATATTGGGTAGAAAGAAAAAGTCCAAATCAATTACGGAAGTGGGAATACTATGACCAAATGtcattcattgaaaaatttatcaaaCCTAGAAGATTAAGGAAAAAACTACACAGTGAATCTGATGAAACGATAGAAAGGAAAGAATCACCTACTTTTAACAATAGTCAGTTACCTAAATCGTCTAACGACCGTTTAATGTCGGACGCGCAACAAGTTTTTGTACCTAAGTTAGAAACCACAGATACCTCATTTACTGACACGACTGATCCTTTAAGTATGTCACCACGTTCTGAAACGACAGATAATGAAAGTGGTTACTCTAGAAATAGTGATCCATTTATACAAGTTCCAATTAGATCTTTAGCAAAAGTACAACAAAATATCGCTGATGACAATGAATTTGCACACACGATAGTTTCCGAATTAAAAAGAATCAAAGATTACACTAAGAAGACTCAATTAAAAGctgctatttttaaattactctgTGAAGCAGATAATGACTCagaatag
Protein Sequence
MNDQILYESITDMKKYIIDLTKELHIEETYGLVGNELELIALIRHCPWLYNRQLRADKLEVTWMAIADVMNASVTECQSRWRHLRESYAKAKKNAEHGIQDSFHFEFYGDMEFLRPYVKHRTRIIDESKKSMDLSLINLVRINPIVYNHFVDGFRTSKKDETWKNIAKELNCTVKECQLRWKTLRERYWVERKSPNQLRKWEYYDQMSFIEKFIKPRRLRKKLHSESDETIERKESPTFNNSQLPKSSNDRLMSDAQQVFVPKLETTDTSFTDTTDPLSMSPRSETTDNESGYSRNSDPFIQVPIRSLAKVQQNIADDNEFAHTIVSELKRIKDYTKKTQLKAAIFKLLCEADNDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01342967;
90% Identity
iTF_01342967;
80% Identity
-