Slut009930.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- -
- Assembly
- GCA_949319165.1
- Location
- OX439237.1:28671474-28671785[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-09 4.2e-06 26.6 0.0 5 37 10 41 8 47 0.92
Sequence Information
- Coding Sequence
- ATGCGACGTAAATTATGTTCAAAGACATTATCTGAAGCAAACAAAGAGGTTAGAAGCGGATGTTCTTTGCGAAAAGTTggacaaaaatatgaaataccAAAATCTACGATATATAAATATCTCCATATGAACAAAGATAAGGATCTCTGCGAGAATAAtgtagaaattttgaaaaatgacgTAAGAAGAGTATTTGATGAGGAAGAAGAGAAACAGTTGGAAGAATATTTAGAAAAAGCAGCTTATCTACATATGGGCTTAAATGTTAAGCAAGTAAGAGAAATTGCGTACCAGTTTGCAGTGGTtaagtaa
- Protein Sequence
- MRRKLCSKTLSEANKEVRSGCSLRKVGQKYEIPKSTIYKYLHMNKDKDLCENNVEILKNDVRRVFDEEEEKQLEEYLEKAAYLHMGLNVKQVREIAYQFAVVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343896;
- 90% Identity
- iTF_01343896;
- 80% Identity
- -