Slut002397.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- clz9_1
- Assembly
- GCA_949319165.1
- Location
- OX439232.1:15842197-15844893[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-10 1.4e-07 31.3 0.0 3 35 11 43 10 46 0.92 2 2 8.2 3.7e+03 -2.0 0.0 28 38 436 446 436 450 0.88
Sequence Information
- Coding Sequence
- ATGAAgaagaaaaatgaaaaacagtatAGTACTGACATGATGTTAGCTATGACAGCTGTTGATAATGGTATGTCTCTTACACAAGCTGCAAGAAGATTTGAAGTACCCAAAAGTACACTGTCACATAAAGTCAGATATTTGACACCTATTGAGTGCAAGAAAGGTCCATCAACTGTGCTTAGTTATAATGAAGAAAAAGAAATAGTAAATTGGATATTATCCTGTGCTGAGAGAGGCTTTCCTGTCACCAAAAATCAGTTACTCGACTgtgttgaaaaatatataattagtgaaaaaaaaatctctccGTTCAAGAACAACAGACCAGGTAAACACTGGTATAATGCATTTATGCGAAGACATCCATGTTTGACTCTACGTATAGCTCAAAATCTCACAACTTCTCGAGCCTCAGTCAGTGAAAGTGCTCTACGCAGCTGGTTCTCTCAAGTCAAACTATATTTagaaaagaaaaatttgttattaGATGATCCTAGTCGCATTTTCAATTTAGACGAGAGCGCATTTATGATGGTACCAAAAGATAACACTGTTCTGACTGAAAAGGGAGCAAAAGCAGTGTATCAAATTGTAAGTGGCAACGAAAAAGCCTCTTTAACAGTGTTAGTTACTGTTGCTGCTTCAGGAAGAATGGCTCCACCAATGATCCTCTTCGATTGCAAAACTACACCAAGAAGAAATGTATTAGATAACATACCTAAAGGTTGGGGTATAGGGCATACAGACAGTGGTTGGATGACAGCCGaaagtttttataattatatcaaaaatatctttTTCAAATGGTTAAAAGAAGAAAATTATACGTTTCCTGTGATTTTATATGTAGATGGACATTCCTCGCACTGCACATTACCTCTCATGAAATtctgcaaaaaaaatcaaatagagcTGATACTTTTATACCCTAATGCCACACACATCATCCAACCCTTGGATGTGGCACTTTTTCGTCCATTAAAAGATTCTTATAGAACAACACTTAGACAGTGGAGAATAGAAAATAACATTGTAGATATGAAAAAGTGGATGTTTGCTCCAGTGCTCAAATTAGCCATCGAAGCAGTTGATTTTTCAACAACAATACAAAACGGTTTCCGTACTTGTGGTTTATACCCTTACAATGCTGATGCCGTTGATTACAACATcttaaacaaaactaaaaaaagaaaaaatactcAACCATTGAGTACGATTGCActtgataaaaataatgaaaatatttatggaGAGACCAATCCAGATGATAATGCTAAGATGTTGAAACTATTTCAAACAAAGTTgatttctcaaagcacttttgaaaattttaagagGGATGAATCATCGCAGTCATGGAGTGGTGAGATTGAAAAGAAAGCGCTCTTTGAATCTTGGATAAAGTTAAAACAATTGTatAGTTCAAGTAGTCAAGAAAAATGTGCTCATCGTGATGAGATTGCTAATAGTAATATATTAAGTTGTGCAGATACTTCTATCGTAGAAAATGTTATATTAGAAATAATCGATGAAAGTTCCATTGATACATGTACAaacaatagttttgaaaatagtCGAGACAGATTAGAACAAAAGTTAGAACATAGCTCTTATGTTGTATATGAATCTGATGTATCAGTCGATTTAAGCTCAAATTTAGGTCAGAGATCAACCATCATAACATCAGAACCAATACATGACGTGATTGATAATTCTAGTCTATCACAAGATGATGCTACGTTTCCAATGGATTTGTCGTTGAGTTCAACCCGTTCAACCCATGAaaATTTCAGTAAAATATTCAGTTTACCTGATGAAACATCAAGTGATGTAGCCAATACTTTTTCATTGACTCTACAAACAGAAAACTCGAATCAATCATCGTATTCAGCAATTGACCAATCGATAACAACAGATGAAGAAAATGAAATTCAGTTGAAAGAAAAACTGAATGAACTCACATCTGAAATTGAAGAACTGGATCGGTTGATTATTGTTAACGATATATCAGTTTTGCAagaaacaatgaaaataaaagaagAACATACTTAA
- Protein Sequence
- MKKKNEKQYSTDMMLAMTAVDNGMSLTQAARRFEVPKSTLSHKVRYLTPIECKKGPSTVLSYNEEKEIVNWILSCAERGFPVTKNQLLDCVEKYIISEKKISPFKNNRPGKHWYNAFMRRHPCLTLRIAQNLTTSRASVSESALRSWFSQVKLYLEKKNLLLDDPSRIFNLDESAFMMVPKDNTVLTEKGAKAVYQIVSGNEKASLTVLVTVAASGRMAPPMILFDCKTTPRRNVLDNIPKGWGIGHTDSGWMTAESFYNYIKNIFFKWLKEENYTFPVILYVDGHSSHCTLPLMKFCKKNQIELILLYPNATHIIQPLDVALFRPLKDSYRTTLRQWRIENNIVDMKKWMFAPVLKLAIEAVDFSTTIQNGFRTCGLYPYNADAVDYNILNKTKKRKNTQPLSTIALDKNNENIYGETNPDDNAKMLKLFQTKLISQSTFENFKRDESSQSWSGEIEKKALFESWIKLKQLYSSSSQEKCAHRDEIANSNILSCADTSIVENVILEIIDESSIDTCTNNSFENSRDRLEQKLEHSSYVVYESDVSVDLSSNLGQRSTIITSEPIHDVIDNSSLSQDDATFPMDLSLSSTRSTHENFSKIFSLPDETSSDVANTFSLTLQTENSNQSSYSAIDQSITTDEENEIQLKEKLNELTSEIEELDRLIIVNDISVLQETMKIKEEHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343872;
- 90% Identity
- -
- 80% Identity
- -