Slut017309.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- retn
- Assembly
- GCA_949319165.1
- Location
- OX439244.1:10448953-10468559[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-20 4.2e-17 62.5 0.0 13 89 34 107 21 107 0.92 2 2 0.021 50 4.6 0.0 23 68 245 295 207 307 0.70
Sequence Information
- Coding Sequence
- ATGCAATGTCACCTTAACCCAACTCCCAATGTCGAAGAGGAGAAAGAACCTTCCCGTGCGCTAGCGAACCATCTGGGTCCGCCGCGTGTTGAGGAATTTGGAAAACAGAGAACTCCAATAAACAGATTACCAATAATGGCTAAGTCAGTTTTGGATCTCTACGAGCTTTACAACTTGGTAGTAGCTCGAGGTGGTTTAGTGGATGTCATCAATAAGAAGTTATGGCAAGAGATCATCAAGGGTTTACATTTACCTTCATCTATTACATCAGCAGCATTTACACTGCGTACTCAataCATGAAGTACCTCTATCCCTACGAATGCGAGAAACGTCGTCTTAGTACGCCAGCAGAACTGCAAGCCGCTATCGACGGCAACCGTCGCGAAGGCAGACGCACTAGCTATACGGGCGGTGGGTACGCGGAGCACCTGGTGCAGCAGCACCACGCACGCAGTCCCGCTCAACACGCGCAGATGTCACCTCTTGCTCTGGTGTCTGGTGTGCAGCACCACCACAGGCTTGGTAACGGCGCTCTGCATCCCAGTCATCCTCCGCCGCCACAACTTGGACAGCCGCCGCAGATGCTACCGGGACCTATACCGGGTATGGCTCCTGCCGAATTCGAAGCACGAATGGTAGAGTACGTGAAACTATTAAACAAAGAACTGAGAGGTGCTGCAAGTACACCCCCACATCACAGACAAGGTTCAACGTCACCCCCGGGAAATACATCGCCTCTGAATCCAGTCGATGTGTCCAGACTTACTCTCTGGagtctatataataataatcaattaggaGGTAGTCATGAACCACAGAGGGAGGCTTTGAACTTGTCTGAAACACAACAAGCGCAACAACAATTGCAACTGCAACAACAGCAGAATTCTATTAAGAGAGAACCGATAGATACAGAACTCCCAGCACCGCCGGCTAAACGGATATTACAGGATGATGAGATGAGTCCTTCACCACCGTCGCGTCAGATGTCACCCGTGCCGTTGACgacgaatattaaaatttctaataGAGgTGACGCTCGTAATGGAGATAATTCTTCAATGGTCGTGAGCATGGAGATCAACGGTGTAATATATCAGGGTGTGCTGTTCGCTCAACAATCGCCAGAAAACGGCCGCAGTTCTAACAGAATAACGACGTAA
- Protein Sequence
- MQCHLNPTPNVEEEKEPSRALANHLGPPRVEEFGKQRTPINRLPIMAKSVLDLYELYNLVVARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRTSYTGGGYAEHLVQQHHARSPAQHAQMSPLALVSGVQHHHRLGNGALHPSHPPPPQLGQPPQMLPGPIPGMAPAEFEARMVEYVKLLNKELRGAASTPPHHRQGSTSPPGNTSPLNPVDVSRLTLWSLYNNNQLGGSHEPQREALNLSETQQAQQQLQLQQQQNSIKREPIDTELPAPPAKRILQDDEMSPSPPSRQMSPVPLTTNIKISNRGDARNGDNSSMVVSMEINGVIYQGVLFAQQSPENGRSSNRITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -