Basic Information

Gene Symbol
XBP1
Assembly
GCA_949319165.1
Location
OX439241.1:26110788-26113257[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.3 8e+03 -2.8 0.6 18 25 37 44 36 47 0.77
2 3 2.9e-15 2.8e-12 46.7 13.3 2 64 51 113 51 114 0.96
3 3 0.062 59 4.0 1.0 35 51 105 121 102 127 0.65

Sequence Information

Coding Sequence
atgagtACGCCTATCTATATATCGATACCAAAATATCTGACTGGGGCCCAAAGCCCCGTCAGTCCTGATTCTATCAATTCCAGTGACGATTGTTACAGTGATTCTGCCAAATCTCGCACGAAAAGGAAACGATTGGATCATTTGTCATGGGAAGAAAAAATGTTGAGGAAGAAACTGAAAAATCGAGTTGCAGCACAAACATCTCGTGACCGAAAGAAAGCAAAGATGGACGAAATGGAGAACAGTTTAAATATCATCAAACAACAGAATGAAGTTTTGATTCGTGAATGTCAGAGTCTGAGAAAACTCAATGAGAAACTGCTTGCAGAAAACAGCACGCTGAAGCAACAAAACAAATGTCTAGACAAAGACGACAGCACAGCCCCACAGAGCTGCTCTGTCTGGCGCGTCCCTGAACAAGGACCCGCAGTGTCCCACAGACTCCCTCTGCCGAAGGGACAGGGCACGCGCCAGGCAGCCGCCCTGTGGCTGGCGATGGCCTGTCTGCTCTGTCGGACATCCTCGCAGAGTTCGACACCACAGACCTCGAACGGTTTGCAGAAAGCCTTCTCGACGAGATCATTACGGAATCTGGAGATCTTGAAATCAAAACTGACAAGGGTTCAAAAGAAACATAGGTATTTACTGTTTGTTATTTCCTTACAGCGGTCAACTACAAATTCCACAACTGAGCAACCTCCCCGATTGGTGGGGCCGCCACCAGAACAACTGGAACCCTGTCGAGATGACAGCAGCATAAGCACGCATACAACGTTACAACCGCACTGCGAAGAATCTACAGAACACAGCTACAGTATCACACATTCCAAACAAGAAAACATAGAAACAGAAGTGATCTACGGAACTTACGATGAGTCTACAAACTCAGTGACGATATTGTCTGCAGATGAAGACGATCTGATGCTCGGGGAAGCTGTCGAAGAGGTCCACACGGAGAGGATAAGCCCTTTGGCTGAGTTTATCTCGAGTTATAACGATGAAGACGAGAGTTCAAACGATGGTGTTAAATATGTTGATTTGTTGTCACCTATACCGAGTACAGTTAGTGCCGCGTCACCGATGTCTAGTAGAGACAGTCTTGTGTCTTCGCCGTCTCCGGTAAAGTCAGATATTTCCCTGTCTGATTGCGGGTACGAGTCTTTTGGATCTCCGTCAGATTTGTGCGATTTTGAGATGTGGGATGAAAGTTTGAATGAATTGTTTCCAAATTTGTTGTAA
Protein Sequence
MSTPIYISIPKYLTGAQSPVSPDSINSSDDCYSDSAKSRTKRKRLDHLSWEEKMLRKKLKNRVAAQTSRDRKKAKMDEMENSLNIIKQQNEVLIRECQSLRKLNEKLLAENSTLKQQNKCLDKDDSTAPQSCSVWRVPEQGPAVSHRLPLPKGQGTRQAAALWLAMACLLCRTSSQSSTPQTSNGLQKAFSTRSLRNLEILKSKLTRVQKKHRYLLFVISLQRSTTNSTTEQPPRLVGPPPEQLEPCRDDSSISTHTTLQPHCEESTEHSYSITHSKQENIETEVIYGTYDESTNSVTILSADEDDLMLGEAVEEVHTERISPLAEFISSYNDEDESSNDGVKYVDLLSPIPSTVSAASPMSSRDSLVSSPSPVKSDISLSDCGYESFGSPSDLCDFEMWDESLNELFPNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-