Basic Information

Insect: Sialis fuliginosa
Gene Symbol: BCL11B
Assembly: GCA_961205875.1
Location: OY540815.1:9349668-9367196[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 4.1e-06 0.00022 21.6 4.1 1 23 534 556 534 556 0.97

2 5 2.6e-05 0.0014 19.1 5.8 1 23 562 584 562 584 0.98

3 5 1e-06 5.6e-05 23.5 3.2 2 23 777 798 776 798 0.97

4 5 1.4e-05 0.00074 20.0 3.3 1 23 804 826 804 826 0.99

5 5 8.8e-05 0.0048 17.4 0.4 1 22 834 855 834 855 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	4.1e-06	0.00022	21.6	4.1	1	23	534	556	534	556	0.97
2	5	2.6e-05	0.0014	19.1	5.8	1	23	562	584	562	584	0.98
3	5	1e-06	5.6e-05	23.5	3.2	2	23	777	798	776	798	0.97
4	5	1.4e-05	0.00074	20.0	3.3	1	23	804	826	804	826	0.99
5	5	8.8e-05	0.0048	17.4	0.4	1	22	834	855	834	855	0.97

Sequence Information

Coding Sequence: ATGTCATTTACCCAATACGCCAGTCCAGACAGAACACTTTGTTTCCAAGGTGCTGGACATTCGGACGTCGAAGGTGGAGGCGATGCTTCCGATTCGGACCTGCAGGACATCCTGACGTGCGGTTCTTGCCAGAAACCGTTCGCGCTATCCGACATCGTACGGTTCATCCAGCACAAAGTAGCTAGTTGCAACAAAGAGAACTATGCTCAAGGCCACGGTTTTTCCGGTTCCGGCGATCGGGATAACGACGATGGCAGCTTACCTTTATCAGTCGTTAATACGCGAAGACCAAGCATATCGGCACCTATATCGGGAAAGAAGACAACACCCACATGTTCGACGTCATCTTCATCTTCCTCGTCAAGTAGTGGTGCAAGAGTGCATACACCACCACCGGCTTCGCCGAGATTACCGGCACCAGGTGATTTGTGTGTCGATGGTGCCGCTTCATCGACGCCTAAAAGAAGAACGTCTTCGTCCCCCTTGACGTCTTCTAGTCTAGATGATGGTGAAGATGTTAAGCCAAATATTAAACAAGAAAGAATGGATACGTCTTCGTCACCTGAAGAACCGAGCCATGCTAGTAAAAAGTCGAGAACAGAAATGGCTGATGCAGAATCAAACACTACTCACAGTGaACCAAGTAATTATGTCTGCTCAACATGTAAGGCGAGAATGCATTCTGCTTGGCGATTAGTGCAACATGTACAACATACTCACGGTGTCAAAATATACGTAGAAAACTCTGGAAATGGTTCTACTGGAAACAATGGCACCAGTGGTTCGAGTGGAAGTGTGAGTGGGCCAAAACCTTCCAATAACAACCACAGCGGTAGCAGTACATGTTCTACGTCATCCGGGTGCTCGTCATCAGGTGGGGGAGGAAGTGGTCCACCGCCAGTACCACCCCCGTCTCTTCGACATCATCTTTTACCACCACCAGATCTACACCATCCGTTTGGAGTCGGTGGTCTCTTACGTTTACCTTTACCCACATCGATGCCTCCGTTAGGGCATCCAGTTCCTCCGGCTCCGTTATTTGCGAGGCCGAATCATGACCATCACTTCAGAATGGAGCAGCTAGTTTCAGAGCAGTTCCGACACCATGGGCTGAACTTGGCAGCAGCCGCAGCGGCTGTGGCTGCTAGCGCTGTTCCACCTTCGCACACGAATTTTCCGTCGCCAGCTGACAGAACCTCACAGATCCCGGTCAGCGGTACGGCAAACAGGGACAGGCAATCGACACAAACGCAACCTCTTTCCTTAGAACCACAGCTGGATTTTTACTCGCAGCGGTTGCGGCAGCTCGCGGGAACCACGAGTCCCGGGGCGGCCGCGACCAGTTCCCCTTCCCCCCGTAAGCATTCCCCTCCTTTCACCAGTCCGTCACCCTCTCAACTTCCGCCGACACCGGTGACGAACAGCACAAACAACAACAACACGAGTAGCAGCGGAAGCAGCCGTCCACAGAGTCTATCTCCTCCGGTTAAACAAGAAGCGCTGCCTTTAACCTCTGCTATAACAACTACACCACGATCGACATCGACACCGCCCAGTAAACCTGAATCACCGCGGTCGAATTCAAACAGCGATGCCATACATTCGTGCGACTTCTGTGGTAAGAAATTCAGGTTCCAGAGCAATCTAGAAATACACAGAAGATCACATACGGGCGAACGTCCCTACAAATGTACAGTGTGCGATCACGCATGTTCACAAAGTTCCAAATTAAAAAGACATATGAAATTACATCGTACACCAGAGGATCGTACGAGTAATGCAGGGTCTGTAGAAACGTTAGATGGTGAAGAAAGTGAAGACGAAGAAGAGCTGGAAGAAGAAGAGGAAGAGGAAGAAATGGAACCGGAAGAAGAAGCTGAAGATTTAAGTGTTCCTAGTCAAGGGCCTCCTGCCAAGCCACCACCTTCTTCTTCAGCTTCTCTTGTTGGGGAACTAATGGACAAGTTCGGTTTAAGTAATATAGCCCAATATAATGAAGCGTACAAACAAGCGTTAAAAGAGTCAGGATCTGCCTTAAAAATGCAACTTGCTAGTAAAGACAGAGATAATAACAACAGCACAGGTTTAACTAACCCTGCGTTGAGATTAAGAGAAGAATTTTCGAAAGGTTTATTTCCCGCACCTCCCCAGCCTTTGCCGTTATTTGCACCATTCGAAAACGCGTTTGAAGTTAGCAAACGGTTAAAACTGGATCAGGGTGATTGGTGGTTACCTGGAATGACTCGTGAATCTAAAAGCGGCATTCCTCCTGGACCGAGCGCTCTGTTACCAAATCCGCTGATAAAGAAAGAGTCACGACGGAACGACACATGTGAGTTTTGCGGGAAGGTGTTCAAGAATTGTTCGAACCTGACCGTTCACAGACGCTCGCACACGGGCGAGAAGCCGTACAAATGCGAGCTGTGCTCATACGCATGCGCGCAGAGCTCAAAGCTGACTAGACACATGAAGACGCACGGTCGGCTCGGCAAGGACGTGTACCGATGTCGGTTCTGCGAGATGCCGTTCTCGGTACCGTCCACGCTCGAGAAACACATGAGAAAGTGTGTGGTGAACCAAGGCAAGGCGCATTTACTGCCGCCGTTGCCAATGCTCTCCGGTGACGAAGACTCGTCCGCAAGTATTGCGTCCAAGGAGGCCACATGA
Protein Sequence: MSFTQYASPDRTLCFQGAGHSDVEGGGDASDSDLQDILTCGSCQKPFALSDIVRFIQHKVASCNKENYAQGHGFSGSGDRDNDDGSLPLSVVNTRRPSISAPISGKKTTPTCSTSSSSSSSSSGARVHTPPPASPRLPAPGDLCVDGAASSTPKRRTSSSPLTSSSLDDGEDVKPNIKQERMDTSSSPEEPSHASKKSRTEMADAESNTTHSEPSNYVCSTCKARMHSAWRLVQHVQHTHGVKIYVENSGNGSTGNNGTSGSSGSVSGPKPSNNNHSGSSTCSTSSGCSSSGGGGSGPPPVPPPSLRHHLLPPPDLHHPFGVGGLLRLPLPTSMPPLGHPVPPAPLFARPNHDHHFRMEQLVSEQFRHHGLNLAAAAAAVAASAVPPSHTNFPSPADRTSQIPVSGTANRDRQSTQTQPLSLEPQLDFYSQRLRQLAGTTSPGAAATSSPSPRKHSPPFTSPSPSQLPPTPVTNSTNNNNTSSSGSSRPQSLSPPVKQEALPLTSAITTTPRSTSTPPSKPESPRSNSNSDAIHSCDFCGKKFRFQSNLEIHRRSHTGERPYKCTVCDHACSQSSKLKRHMKLHRTPEDRTSNAGSVETLDGEESEDEEELEEEEEEEEMEPEEEAEDLSVPSQGPPAKPPPSSSASLVGELMDKFGLSNIAQYNEAYKQALKESGSALKMQLASKDRDNNNSTGLTNPALRLREEFSKGLFPAPPQPLPLFAPFENAFEVSKRLKLDQGDWWLPGMTRESKSGIPPGPSALLPNPLIKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKAHLLPPLPMLSGDEDSSASIASKEAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344438;
90% Identity: iTF_01344438;
80% Identity: -