Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540810.1:9263174-9265273[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 7.7 4.2e+02 1.9 0.0 8 23 170 185 169 185 0.86

2 7 1.5e-05 0.0008 19.9 0.5 3 23 193 213 191 213 0.93

3 7 9.3e-05 0.005 17.4 0.9 1 23 219 242 219 242 0.98

4 7 0.00033 0.018 15.6 4.5 3 23 250 271 248 271 0.94

5 7 0.00016 0.0085 16.6 2.4 1 23 278 300 278 300 0.98

6 7 5.9e-06 0.00032 21.1 6.3 1 23 305 327 305 327 0.98

7 7 1.3e-06 7.1e-05 23.2 1.6 1 23 333 355 333 355 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	7.7	4.2e+02	1.9	0.0	8	23	170	185	169	185	0.86
2	7	1.5e-05	0.0008	19.9	0.5	3	23	193	213	191	213	0.93
3	7	9.3e-05	0.005	17.4	0.9	1	23	219	242	219	242	0.98
4	7	0.00033	0.018	15.6	4.5	3	23	250	271	248	271	0.94
5	7	0.00016	0.0085	16.6	2.4	1	23	278	300	278	300	0.98
6	7	5.9e-06	0.00032	21.1	6.3	1	23	305	327	305	327	0.98
7	7	1.3e-06	7.1e-05	23.2	1.6	1	23	333	355	333	355	0.99

Sequence Information

Coding Sequence: ATGGAGCTTCTCAAGAAAGAAATCTGCAGGACATGTTTAACAAAAACAAGTAAAGGACTAGAACCTATTTTATTCTACGTGGATGATTTAGCGGTGTGTGCTTCTGTGTacGTACAACCTAATGATGAATTTCCAAAGAAAATTTGTAAAACTTGTGTAACAAAACTGAAAGTAATATTAGAATTTAGAAGACAATGTCAGATttctaaaaatgcatttttatttgcattaaaaaagaaaaaaagtttatttgtgTCGACTGATAAAAGAAATCTTAATAATGACAACAGAAAGCAGTGCGAGGAATTTAATAATGAAACTGGGGAAGTTATTTCAAATGAagaaaattacatcaaaattgAATCAGTATTAGTAGAAATTAATGAAGGAATAGATGTTGAAAAAGAATCAAAGGAAAAAATCGATATAAATTGTGTAAAGATTGAAAATAAAGATGAAGGTTTTGTTTATGACAAATGTGATAATACTAATTTACAAGTAAATTATAAAGAATATCCAACAATATATAAACTTCGGAGTCATATTTATGTCCATTCTCGAAGAGGAAAACACCTTTGTCAAATTTGTGGAAAACAGTTTACTTTTCCTGAAAATTTAGCACGGCATGAAGATATCCACAACAAAGTTTTCCGATTCAAATGTCCTATTTGTCCAGACAgAGCATTTGTTCAACAATGTCAGCTTAAATCACATCTGATAACACACAAAAAGCAAGAGGTTCATCTTTGTAATATTTGTGGAAGTAAATACAATCGTGCTCATTCTTTAAGAAAACATATTCGTCAGAAACATACAGTATCAGATCAAACATATCCTTGCACAGCATGTGACAAAGTTTTCAAAAATCGCCAGGCATTAACATGTCACATGAGGTACCACAAGCCTCCACGTTTTACTTGTTCAATTTGTGATAAGAAATTCAAACGGAAGCATCACCTGGACACCCACCAGCTCATACATACGAATGAACGACCATACCAGTGCAGTTTGTGCAACCGTGCATTCCGACAGAAACCTTTATTGACATATCACATGAAAAGCCACCAGAGTTAA
Protein Sequence: MELLKKEICRTCLTKTSKGLEPILFYVDDLAVCASVYVQPNDEFPKKICKTCVTKLKVILEFRRQCQISKNAFLFALKKKKSLFVSTDKRNLNNDNRKQCEEFNNETGEVISNEENYIKIESVLVEINEGIDVEKESKEKIDINCVKIENKDEGFVYDKCDNTNLQVNYKEYPTIYKLRSHIYVHSRRGKHLCQICGKQFTFPENLARHEDIHNKVFRFKCPICPDRAFVQQCQLKSHLITHKKQEVHLCNICGSKYNRAHSLRKHIRQKHTVSDQTYPCTACDKVFKNRQALTCHMRYHKPPRFTCSICDKKFKRKHHLDTHQLIHTNERPYQCSLCNRAFRQKPLLTYHMKSHQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344415;
90% Identity: -
80% Identity: -