Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540811.1:2131986-2133620[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 7.4 7.4 4.3 1 23 223 245 223 245 0.98

2 10 0.0021 0.11 13.1 1.8 1 23 292 314 292 314 0.98

3 10 0.00018 0.0097 16.5 3.3 1 23 320 342 320 342 0.96

4 10 0.00017 0.0093 16.5 0.6 1 23 348 370 348 370 0.98

5 10 0.0059 0.32 11.7 1.4 1 23 376 398 376 398 0.96

6 10 0.00026 0.014 15.9 1.0 1 23 404 426 404 426 0.99

7 10 0.00042 0.022 15.3 0.8 1 23 432 454 432 454 0.98

8 10 0.00025 0.014 16.0 2.9 1 23 460 482 460 482 0.99

9 10 0.011 0.6 10.8 0.1 1 23 488 510 488 510 0.98

10 10 0.00029 0.015 15.8 1.0 1 23 516 538 516 538 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	7.4	7.4	4.3	1	23	223	245	223	245	0.98
2	10	0.0021	0.11	13.1	1.8	1	23	292	314	292	314	0.98
3	10	0.00018	0.0097	16.5	3.3	1	23	320	342	320	342	0.96
4	10	0.00017	0.0093	16.5	0.6	1	23	348	370	348	370	0.98
5	10	0.0059	0.32	11.7	1.4	1	23	376	398	376	398	0.96
6	10	0.00026	0.014	15.9	1.0	1	23	404	426	404	426	0.99
7	10	0.00042	0.022	15.3	0.8	1	23	432	454	432	454	0.98
8	10	0.00025	0.014	16.0	2.9	1	23	460	482	460	482	0.99
9	10	0.011	0.6	10.8	0.1	1	23	488	510	488	510	0.98
10	10	0.00029	0.015	15.8	1.0	1	23	516	538	516	538	0.96

Sequence Information

Coding Sequence: ATGGAAGGCAGTATTAAAAAAGAACAGAATCCTTGTGGTAACAATCTTTTTTCATCATCTACTTTAAAACTAAAAGAAGAACCTAAAGATTACATTGACAATGTCGAGTTATCAAGAAGCGAAACAGGATACGAATTCTATTCTTGTGGTACTTCTGGTAATGAAAATATCGCAGAAGAGCCAAATTCTTctaataattgtttaatttcaAAGAATACAGGTattcaagaaaatatatatgataatgaTAGTATAAAAgacaatattaaaaaagaacaaGATCTTTGTGATAACAATCTAAATTCATCATTtactttaaaactaaaaaaagaagCCAAAGATTACATTTTGCTTGACAGTGTAAAAGTTGAGATACCGAGAAGAGAAATGGGTTCTTATTCTGATGGTGCTTCTggtaatgaaaatattgaagaAGAACCAAATTCTTCTAATATTCATTTACTTTCGAAAACTATTcatgaaaatatgtataaaaacaatagtatTAAGCAAGaatacgtaaaaaatgattttacatcaaaaaattattgtagCAGTGATattaaacaagaaaatattgatACAAATTTAGAGTTAATGGGACATAACACCTTTTTACAATGCAAAGTCAAATTAACAAGACAAGAATATTATTACAGaacatattttgtttgtaaatattgcCTCAAATTATTCCAACAAGAAGTACATATGCATGAACATTTACAAAGTCATGAATATAATAAATCCAATGAAACTATATTATTAACACATGAAAACAgtgaagaaaattatattaaccaATGTAAATACAGCACCAAGGAACAAGGTAAACTTGTTAGATATGAACGTAATCACACTGGCGAACGTCCTTTTAAATGTAACAAATGTGAGTACAGCGCCAAACACAAAGTAAGTTTGGATATGCATATGATGGCACATTCAGGTGTAAAACCCCATGCATGTGATATGTGTGACTATAGAACTACAAGCAAAAGTTCACTTCTAACGCATAAACGTACTCATACTGGCGAAcgtccttttaaatgcaacaaaTGCGACTACAGCGCCAAACAGAAAATAAGTTTAGTCATGCATATGATGGCACATTCAGGTGTTAAACCCCATGCATGTGATATGTGTGACTATAGAACTAAAAGCATTAATAGTCTTATAGTACATAAACGTTCTCACACTGGCGAATGCCCATTTAAATGTAATCAATGCGAATACAGCGCCAAACAGAAAATAAGTTTGGACAAGCATATTATGACACATTCAGGTGTAAAACCATATGCTTGTGATATGTGTGACTATAAAACTAAGAGCAGTAATAGTCTTGTAGTACATAAACGTTCTCACACTGGCGAACGTCCATTTAAATGTAACCATTGTGAATACAGCGCTAAGGAAAAAGGTAAACTTGCAAGACATCAACGTTCTCACAGTGATGAACGTCCTTTTAAATGTAACCAGTGTATATACAGCGCCAAGGATAAAGGGGGTTTGGTAGTGCACATGATGATACATTCAGGTGTAAAACCCCATGCGTGTGATATTTGTGACTATAGAACTATTACCAATAGTAAACTTGTAGCACATAAACGTTCTCATACTAGCGAACATTCCTTTTAA
Protein Sequence: MEGSIKKEQNPCGNNLFSSSTLKLKEEPKDYIDNVELSRSETGYEFYSCGTSGNENIAEEPNSSNNCLISKNTGIQENIYDNDSIKDNIKKEQDLCDNNLNSSFTLKLKKEAKDYILLDSVKVEIPRREMGSYSDGASGNENIEEEPNSSNIHLLSKTIHENMYKNNSIKQEYVKNDFTSKNYCSSDIKQENIDTNLELMGHNTFLQCKVKLTRQEYYYRTYFVCKYCLKLFQQEVHMHEHLQSHEYNKSNETILLTHENSEENYINQCKYSTKEQGKLVRYERNHTGERPFKCNKCEYSAKHKVSLDMHMMAHSGVKPHACDMCDYRTTSKSSLLTHKRTHTGERPFKCNKCDYSAKQKISLVMHMMAHSGVKPHACDMCDYRTKSINSLIVHKRSHTGECPFKCNQCEYSAKQKISLDKHIMTHSGVKPYACDMCDYKTKSSNSLVVHKRSHTGERPFKCNHCEYSAKEKGKLARHQRSHSDERPFKCNQCIYSAKDKGGLVVHMMIHSGVKPHACDICDYRTITNSKLVAHKRSHTSEHSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -