Sful015099.1
Basic Information
- Insect
- Sialis fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_961205875.1
- Location
- OY540820.1:6561590-6572390[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 9.3 5e+02 1.6 0.0 3 23 144 165 143 165 0.83 2 21 1.2 63 4.5 0.1 2 23 169 191 168 191 0.95 3 21 9.4 5e+02 1.6 0.9 2 23 195 217 194 217 0.92 4 21 9 4.9e+02 1.7 3.4 2 23 243 263 242 264 0.92 5 21 0.019 1 10.1 0.5 3 23 344 365 342 365 0.96 6 21 0.33 18 6.2 2.8 2 23 621 643 620 643 0.90 7 21 1.5e-05 0.0008 19.9 0.1 2 23 653 675 652 675 0.94 8 21 8.3 4.5e+02 1.8 0.1 3 23 688 708 686 708 0.85 9 21 0.23 13 6.7 6.9 1 23 755 778 755 778 0.96 10 21 7.5 4e+02 1.9 3.1 1 23 820 845 820 845 0.95 11 21 1.6 88 4.0 0.2 2 23 860 882 859 882 0.95 12 21 0.068 3.7 8.3 1.3 1 23 890 913 890 913 0.97 13 21 6.5e-05 0.0035 17.8 0.3 1 23 919 941 919 941 0.97 14 21 1.8e-05 0.00096 19.6 2.7 1 23 946 968 946 968 0.98 15 21 1.7e-07 8.9e-06 26.0 2.9 1 23 973 995 973 995 0.98 16 21 0.0001 0.0056 17.2 2.1 1 23 1001 1023 1001 1023 0.98 17 21 1.1e-06 5.7e-05 23.5 0.9 3 23 1031 1051 1030 1051 0.98 18 21 0.0018 0.099 13.3 2.2 2 23 1058 1079 1057 1079 0.91 19 21 0.0022 0.12 13.1 1.7 3 21 1087 1105 1086 1108 0.90 20 21 4.3e-05 0.0023 18.4 0.6 1 23 1115 1137 1115 1137 0.98 21 21 0.0055 0.29 11.8 1.1 2 23 1144 1166 1143 1166 0.95
Sequence Information
- Coding Sequence
- ATGGATACAAATGAGCAAGAAAATGAGGGTTGCAatatgaatttcaaaaacatCAGTTATGAAGTTGATTCcgaaacattaatattaaacaaagcGCCAATAAAAAGGCACTTGAAACCtgaatcaaaaacaaaacggatCAGAATAAGACTTCCGATACCTACCGAACCTCCAGACCAACAAATCACTAAAATAAAGTCAATATCACAGCAAATAGTCAAGCCCAAAGAACCAGAAATAAATGTACCTGTCGAAACGTTGAGAGAATTCAGTCGCCGGGAACAAACCATCGACCGAGATGCTCAAAACACCGAAGTGAACATATCTCTACGGAAAGGGCCCCCATTTACATGTAAACTATGCAGTGTTTGGTTTTTAGTAAAAACAAAGTTGGCCGTTCATTACGTGACTAATCACAAAGCGGAGTATTGCGGCCTGTGCAATATAGTGTTTCCAAACGTCATAGAACGAGTCGATCACGAAAATAGAATCCATTTTCCGATAGAGTGTGAAATCTGTATGCAGTTGTTTAAAGATAATTGGGTGTTGAATGAACATTATGAAACAGACCACGACGTTATTTCTTGTTTGTTCTGTGGGATTTTAGTACAACCAAAAAGTTGTTATGTTACGCATATTCGAAGAAAACATAACGTCTATGACAAATACTTTGATCTAGAAGACGGTTTGAAGATTTGTGATGAGTGGGATTCGCAGTGGCATTGGAGATGTAGATTATGTAATAAATCTcgtaataaaaaagattttgtcGGACACTACAACATGCATCATAAAGTGACTATCGCTTCATTAGTTCAATTAATCGCAAGTGAAAATCTAGAACTGGATATAATAGGTAATCGAGATGACGACACAGAAGAAGCTGAGATCTTAAAAGATTTAATTGGAACGTCTTTAATAAGTAAAAACGAGAAACTGACAAATAAGTGTTGTAATATCTGCAATATGTCGAATAACAATAACGTACCTGCACTCTTTCACCAAGTTTACTGCCATTCTCATTTCGGGTGCAAGAACTGCTTGAAGATATTCATGGACGAGAAGAGTTTGAACACACACATCGAAAAAATACACAGGTATTTCCAGTGCGTGTTAGGATGTGCGAAAGTGACTTGTGTGAGTGAAGAAGAAATAAACGAACACTATAATGCGTCTCACGATATCATAACATGCCGGTTTTGTAATATCTTCGTCAGTAAATCAGATGATAAATATACAGAACATCTTAAAACTCAACATAAGTTTaacatagataaaaataaatcagattCCAGagaatctttattttatttacaatccGAAAAGTCGATTTTTTGCTACTTatgtaacataaacataacGGATATAATGAATGACGTAGAAACACTATACTTACATTTCTCTGAGACTCATAATTTAAcgataaaatctattttatcaTTGATAAAATCAAACCCATTGCAGAGAAAGCGGgcaaagaaaaaaatcaaaaggcTTGATAATTGTAATTCGGATATTTTTTGCGATGATAGCTGTTCTTCGGTGTACGACAGTTGTTCGGGGGCTGATAGTGATGAAGAACAGAATAACAGTAGTGATATTGTACCAAAGATATCgataaaagaagaaaaaatcgATGACGATGAAAAATATGACCCGATTATCACCGGAGAAGGAATCGAAGATATAGACCCTACAGAAGTTGAATGTTATATGGGAGAAACAAGCGACGATGAATTAATCGAAAGTAGTACAGAAACCGAAGAACAAGAAgataaaattatcattaaatcGGAACCGGTTGATTACGAAGACGTCGATGTACAAAATACAGACAGAATCAAAAGAAAAATCCAATTAAAATGTGATATCTGCAAGTGTTCTATTTCCTCCCAGAAGGATCTTTTAAGTCACGCCCATTTAACGCATGGTTTCATTATTAAAGTTTCACTTTTGACTTGCGAGGAGTGTCCAGAAACATTCACGACAGAGGATAATTTAGAAATGCATATGATTAACGCCCATGGGAAGGAATTTAACAGAATTAAAGAGAAAATTTCTTGTCCATTTtgtgaatataaaaatacaaagacTGCGTTACGTGTTCATATTATTAGTGCGCATAAAGTAGAGATAGAAAATGCGGAGCCTTCTGTAAAGTTGGGATACAAATGTAGGTTTTGTCGTGATTTGTTTTGGCAAGTGGTTGATCGGAATGATCACGAGATAGAGCAGCATTCTAAACAGTTCGGAGAAGGGTTTTATAAGTGCTTTGtgtgtttcaaaatatatagCAGTAGGTTGTGTCTAAAACGGCATGTTCATTCAACGCACAAATTAGAACCAAGATACAGTAAGAAACATTTATCGTACAAATGTCTAAAGTGCCATGTTTTGATGCCTCGTCTCGACGAAATCAGAAGTCACTTCAATCAAATGCACCCGAACCTAAAAATATTCAGATGTGATTACACCGGATGTAATGCGAGATTAAAATCGAAAAAGACTTACTATATGCACGTTAAGcacATACACGAAGTGATAAAATTCGGTAAAGTTGTTTTCGACGGTCCCTCTAGTTGTAAGTTATGCGGTCGTTGGTTGTCTACTCCACGGGCAGCGAGTGCTCATTACAGGATGAAGCACATCCCAGAGAAGCGAGTAGGTTTTAAATGCCGACTGTGTCCGATGCGATTTGAATCCAACGAAAAACggaaGCTTCATTACGCGACAGACCATCGGGGAGAAGGAGCTTATACTTGCGCGGAATGTGGGAAAGGCTTCAGCAGTAAGTCTGGTCTCTACGGGCACAAACAACTCCACATGAACAGCTCTTATGAGTGCCAGTATTGCCACAAATCGTTTGCGCGTCGGGACACGTACACGGAGCACCTGTTGATTCACTCTGGTCCGCGTCACCAGTGCCCGTACTGCCCGCGTATCTTCACGCAGCGCTCGAACCTGACGCGGCACAAGCGCATCCACACCGGCGATAAGCCGTACTCGTGTACTATGTGCCCGAAGCGATTCAGCGACAAGGGCGCGTGCAACTCGCACATGCGTGTCCACACTCGCGAGGAGGAGAGCGCGTGTCCATACTGTGGCAAGGTGTTCAGCAAGAAGCAGAAGTTGAATTATCATATTAGGAAACATACCGGAGAAGGGCTAGTTTCGTGCCCTACGTGCAGTAAAGTGTTCACGAACAGCTTTAGCCTGAAGGAGCACTGTGCGACGCACGAGACCGGCACGCAGGTGCTGTGCGGCGAGTGCGGTCGTGGTTTCAGCCACGAGCGGTACTTGAAGCGGCACCACGTCGCGATGCACACGCAAAACGGCAGAAAGCACGAGTGCAGCGTCTGTGGGAAGAGGTTCGTCGCGGCCAACCAGCTGAAGAGCCACGTCATGACGCACGCCGATGTCAAGCATATCAAGTGTTTATTGTGCAATACTTCATTCTCTTCTCGCAAAACGATTGCGCGTCATTTACTGAGTAAACACCAAGTATCGATAAACGTCGATTCCGAAGATTCACTCAACAAATACTTCTACGAACTGTCGACTGAAGAGGCAGGTCTAAATGTGCCTAATAAAGACGTAAACTCCGATGAAGAATCGCCGACAATGGTCCCGCTTCAAAACACAATAGATGAAGtagaaaaaataatcgagaATAAACTAAACGATACAGAAAATAAAGAAAAGGTGCCTCTAAATTTAAGCCCAAAGAAAGTGATTAAAAAAAGACGGAGATCAAGTTTTAAAGTAGACGATTTTTACGAAGAAGAATTTGAAGTTTTACCTTTGGAGACGAAAAGCAGGAAGATTAAAAGGCCTCAGCGATACGTGGCAGATTTAAGTGCGACGAAAAAGAAACTGTTGAGAGGGAAACAAGATGATTGTTTCGAGACGTCAGATGAAATCGAGATTAAAAATGAACCCGTTGATGAAATTGAAAGAAACGAAggttcatag
- Protein Sequence
- MDTNEQENEGCNMNFKNISYEVDSETLILNKAPIKRHLKPESKTKRIRIRLPIPTEPPDQQITKIKSISQQIVKPKEPEINVPVETLREFSRREQTIDRDAQNTEVNISLRKGPPFTCKLCSVWFLVKTKLAVHYVTNHKAEYCGLCNIVFPNVIERVDHENRIHFPIECEICMQLFKDNWVLNEHYETDHDVISCLFCGILVQPKSCYVTHIRRKHNVYDKYFDLEDGLKICDEWDSQWHWRCRLCNKSRNKKDFVGHYNMHHKVTIASLVQLIASENLELDIIGNRDDDTEEAEILKDLIGTSLISKNEKLTNKCCNICNMSNNNNVPALFHQVYCHSHFGCKNCLKIFMDEKSLNTHIEKIHRYFQCVLGCAKVTCVSEEEINEHYNASHDIITCRFCNIFVSKSDDKYTEHLKTQHKFNIDKNKSDSRESLFYLQSEKSIFCYLCNINITDIMNDVETLYLHFSETHNLTIKSILSLIKSNPLQRKRAKKKIKRLDNCNSDIFCDDSCSSVYDSCSGADSDEEQNNSSDIVPKISIKEEKIDDDEKYDPIITGEGIEDIDPTEVECYMGETSDDELIESSTETEEQEDKIIIKSEPVDYEDVDVQNTDRIKRKIQLKCDICKCSISSQKDLLSHAHLTHGFIIKVSLLTCEECPETFTTEDNLEMHMINAHGKEFNRIKEKISCPFCEYKNTKTALRVHIISAHKVEIENAEPSVKLGYKCRFCRDLFWQVVDRNDHEIEQHSKQFGEGFYKCFVCFKIYSSRLCLKRHVHSTHKLEPRYSKKHLSYKCLKCHVLMPRLDEIRSHFNQMHPNLKIFRCDYTGCNARLKSKKTYYMHVKHIHEVIKFGKVVFDGPSSCKLCGRWLSTPRAASAHYRMKHIPEKRVGFKCRLCPMRFESNEKRKLHYATDHRGEGAYTCAECGKGFSSKSGLYGHKQLHMNSSYECQYCHKSFARRDTYTEHLLIHSGPRHQCPYCPRIFTQRSNLTRHKRIHTGDKPYSCTMCPKRFSDKGACNSHMRVHTREEESACPYCGKVFSKKQKLNYHIRKHTGEGLVSCPTCSKVFTNSFSLKEHCATHETGTQVLCGECGRGFSHERYLKRHHVAMHTQNGRKHECSVCGKRFVAANQLKSHVMTHADVKHIKCLLCNTSFSSRKTIARHLLSKHQVSINVDSEDSLNKYFYELSTEEAGLNVPNKDVNSDEESPTMVPLQNTIDEVEKIIENKLNDTENKEKVPLNLSPKKVIKKRRRSSFKVDDFYEEEFEVLPLETKSRKIKRPQRYVADLSATKKKLLRGKQDDCFETSDEIEIKNEPVDEIERNEGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01344372;
- 90% Identity
- iTF_01344372;
- 80% Identity
- -