Sful015190.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sialis fuliginosa
Gene Symbol
Pgant1
Assembly
GCA_961205875.1
Location
OY540820.1:8839476-8845177[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0004 0.021 15.4 3.0 1 23 660 682 660 682 0.99
2 11 0.0028 0.15 12.7 4.1 1 23 688 710 688 710 0.97
3 11 0.072 3.9 8.3 5.6 1 23 718 740 718 740 0.95
4 11 0.025 1.3 9.7 1.7 1 23 746 768 746 768 0.97
5 11 0.089 4.8 8.0 5.1 1 23 777 799 777 799 0.97
6 11 1.3e-05 0.00071 20.0 0.1 1 23 805 827 805 827 0.93
7 11 0.00017 0.0092 16.5 1.4 1 23 833 855 833 855 0.98
8 11 1.1e-06 6e-05 23.4 0.8 1 23 861 883 861 883 0.99
9 11 0.00064 0.034 14.7 0.4 2 23 890 911 889 911 0.97
10 11 1e-05 0.00055 20.4 0.3 1 23 917 939 917 939 0.98
11 11 5.4e-06 0.00029 21.2 0.4 1 23 945 967 945 967 0.98

Sequence Information

Coding Sequence
ATGTTCAGAGCTACCTCAAAGAGGAGTCGatctaatgaaataaataaaatagaaaagtcAGATAAACTCACGGCAGCTAATTATGATGACTTAACTGAAGAAGAAAAAGAGTACgaaaaagacataaattatgATTCTAGTATTATTATATCTCGTTTAGGAGATGAAGGTGAACCGGCTTATTTACCACCTTCTCTAGAAGCAGCCGGAGAagaatctattaaaaaatatgctttaaatgtAGTTCTAAGTGACAGAATTTCATTATTCAggaaattaaaatcatttagtCATGAAgactgtaaaaaaattaaatatgacatAGATATAAACGCAacaattgttataatatttcatGATGAAGTCCTCTCAGTATTGTTACGCACAATTTGGAGTATTCTTTTTAACACCCCGAAAGAATTTTTAgatcaaattattttagtgGATGATTACAGTAATAGAGatgAGTTAAAAGGAAAattagattattatttaaaaacaagattaaaaaattatccaGTGAGATTAGAACGTTTAAATAAAAGGTCGGGTTTGATCAGGGCGAGACTTCATGGGGCTAGGTTAGCAAGGAATTCAGCCAAGGCCTTGTTGTTTCTTGATGCACATTGTGAAGTTACTGACAGATGGATAGAACCACTGTTAGACAGGattcaaaaaaatcgtacaacTGTCGTTATGCCAATAATAGATTTAATAAATGAACGTACATTAGAATATACCTCAATGGGTGATGATTTTCAGGTTGGCGGTTTTACTTGGGATGGAACTTTCGACTGGATAAATATTCAGAAACCGGAAGATAGAAGAAGTTTAGCAGATCCTGTCCGATCACCAACAATGGCAGGTGGTCTATTCGCTATCGAGCGAAACTACTTCTGGGAGATTGGTTCATACGATGAGCAAATGGACGGTTGGGGAGGCGAGAATCTCGAAATGTCATTCAGAGTGTGGCAATGCGGTGGGACGCTAGAAACAGTCCCTTGTTCTAGAGTCGGGCATATCTTCAGAGACTTCCACCCTTACAGGTTCCCTGATGATAAAGATACCCACGGTATTAACACAGCTCGAATGGCGAAGGTCTGGATGGACGATTACCAGAGGTTTTATTTTCTACATCGGCCAGCTTTTAACAATGATGCAGTGATTGGAGATATAACTCATAGAtttatgttacgtgaaaaattacattgtaaaagttttaaatggtatttagataatatttatCCTGAAAAATTCATTCCTGATGAAAATGTACAGGCGTTTGGCAGAgTAAAAAATCCCGGAACACATTTATGTTTAGATGACTTACAACATGTTGACCAACCGATATATCCTCTAGGTGTATATTCTTGCTATGAAAATCTAGAAGCAACACAGTTTTTTTCGTTAAGCGATCGTGGTGAGCTCCGAAAAGAAACAGCTTGTGCTGAAATTGTAGGACGGCCTAATCGTAAGCACTACAGAAAAGTTCTTATGACGAAATGCCACGGACTAGGCGGTAGTCAATTATGGAGCATCACAAAGGACTCTCAACTGTTGAATCCAGGTtctagtttatgtttaaatgttaaAGGGCTTGTTGATTCGCAGAATCTTTATGCTAGTCCTTGTTTTGAAAATATACCGGAACAGttagaAGAAAGCGACAGTTTTcctaaatatatttgtaataaatgtacTGAAGATGCTTACAGtgcttataaatttaaacaacaatttGAAGATTCCGagaaaaaactttatttgatgTTAAAAGAAAGTAATCAAACGATTATAGAGAAAGCTTATGTAGATTTGCATAtcaaagatataaataaaaaagaaatgacTGAGGAAGTAGAAAATGATACCACAGAAGCAACGTTAGATATTGAAGAAAATGAAAATGTCGATCCCCTTGGTGCAAATCAATCAGAAAACAAAATAGAAATAACtgagaatgaaaaaaaattagaatacaaATGTGATTCATGTGACCAGGATTTTAAGtcaatgaaattattaaataaacataaaaaaactcaTTCTAAATTAGAAACACATAGTTGTAATATATGTGGTAAAGAATATGTTATGGCTTCTCATTTGAAGtttcacAAACGTACTCATTTACCATCAGAAGACAAACCCCATGAATGCAAGATCTGCAATCGCAAATACGCATACATACACCAGCTTAAACAGCACTCTTACAAGCACTCATTAACGAAACCGTTCCCTTGTACTCGGTGCAGCCGCGAGTGTTTGACCGCCGAGAGTCTACGGAGGCACATGGTAACACATGACCCCGATTACAAAAGACCTAAGCACACTTGCCACGTTTGTCACCAGGAGTTCCTGTACCCAAGCTTTCTGGCCGAGCACATGAAGAATCATACGGGAGAGAAGCCGTTTCTGTGTCCGGAGTGCGGGAGAGGCTTCAGGCAGAAAGGCGCTTTGAAGGATCATATTACAGCCCATAcaggTGATAAACCGTTTAGTTGTGAGTTCTGTAAGAATTCGTTCCGTTCTGCAAGTGTTTTGAGAGTCCACCTACGCAGACATACAAATGAAAGACCGTATGTATGTAGCATCTGTAACGCTGCATTCCGACAGTCTTCAGACATGAAACGACACACTCGTACCCATTCCGGATACAAACCAATCCAGTGCCAAGTTTGCAAGAAAGGAATGTCAACTacagGGCAACTAACGGTCCATATGCGTAGTCACACAGGAGAGAAACCGTTCCCCTGTACGACGTGTGATAAAGCGTTCGCTACCCGCACCATGCTCGTCAAACATGAAAGAATACATTCGGGAGAAAGGCCGTATGTATGTGCTACGTGTGGTAAAGCATTCCGACAGAGGTCAGCTATGAACACGCATGCTAAGACGCATGATAAAGATAGAGACAGGAAACGGAGAGTTACAGTCGTAGTGGAGAATGTTAAATTTGAAGAATCAGTAGCTTGA
Protein Sequence
MFRATSKRSRSNEINKIEKSDKLTAANYDDLTEEEKEYEKDINYDSSIIISRLGDEGEPAYLPPSLEAAGEESIKKYALNVVLSDRISLFRKLKSFSHEDCKKIKYDIDINATIVIIFHDEVLSVLLRTIWSILFNTPKEFLDQIILVDDYSNRDELKGKLDYYLKTRLKNYPVRLERLNKRSGLIRARLHGARLARNSAKALLFLDAHCEVTDRWIEPLLDRIQKNRTTVVMPIIDLINERTLEYTSMGDDFQVGGFTWDGTFDWINIQKPEDRRSLADPVRSPTMAGGLFAIERNYFWEIGSYDEQMDGWGGENLEMSFRVWQCGGTLETVPCSRVGHIFRDFHPYRFPDDKDTHGINTARMAKVWMDDYQRFYFLHRPAFNNDAVIGDITHRFMLREKLHCKSFKWYLDNIYPEKFIPDENVQAFGRVKNPGTHLCLDDLQHVDQPIYPLGVYSCYENLEATQFFSLSDRGELRKETACAEIVGRPNRKHYRKVLMTKCHGLGGSQLWSITKDSQLLNPGSSLCLNVKGLVDSQNLYASPCFENIPEQLEESDSFPKYICNKCTEDAYSAYKFKQQFEDSEKKLYLMLKESNQTIIEKAYVDLHIKDINKKEMTEEVENDTTEATLDIEENENVDPLGANQSENKIEITENEKKLEYKCDSCDQDFKSMKLLNKHKKTHSKLETHSCNICGKEYVMASHLKFHKRTHLPSEDKPHECKICNRKYAYIHQLKQHSYKHSLTKPFPCTRCSRECLTAESLRRHMVTHDPDYKRPKHTCHVCHQEFLYPSFLAEHMKNHTGEKPFLCPECGRGFRQKGALKDHITAHTGDKPFSCEFCKNSFRSASVLRVHLRRHTNERPYVCSICNAAFRQSSDMKRHTRTHSGYKPIQCQVCKKGMSTTGQLTVHMRSHTGEKPFPCTTCDKAFATRTMLVKHERIHSGERPYVCATCGKAFRQRSAMNTHAKTHDKDRDRKRRVTVVVENVKFEESVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01344328;
90% Identity
iTF_01344328;
80% Identity
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