Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540810.1:30988130-30993258[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0059 0.32 11.7 1.1 2 23 194 216 193 216 0.95

2 14 0.0053 0.29 11.8 0.3 1 20 220 239 220 241 0.95

3 14 0.0091 0.49 11.1 0.7 2 23 248 269 247 269 0.97

4 14 0.00076 0.041 14.5 0.7 1 23 274 296 274 296 0.99

5 14 0.00014 0.0077 16.8 1.0 3 23 303 323 301 323 0.98

6 14 0.077 4.2 8.2 2.0 1 23 365 387 365 387 0.98

7 14 7.5e-05 0.004 17.7 0.4 1 23 483 506 483 506 0.98

8 14 0.051 2.7 8.7 0.3 1 23 780 802 780 802 0.97

9 14 0.0044 0.23 12.1 0.4 1 23 840 862 840 862 0.96

10 14 0.0018 0.097 13.3 1.5 1 23 868 890 868 890 0.97

11 14 3.8e-05 0.002 18.6 0.5 2 23 897 918 896 918 0.96

12 14 2e-05 0.0011 19.5 3.1 1 23 924 946 924 946 0.98

13 14 0.0026 0.14 12.8 2.0 1 23 952 974 952 974 0.97

14 14 0.00036 0.02 15.5 3.1 1 23 980 1003 980 1003 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0059	0.32	11.7	1.1	2	23	194	216	193	216	0.95
2	14	0.0053	0.29	11.8	0.3	1	20	220	239	220	241	0.95
3	14	0.0091	0.49	11.1	0.7	2	23	248	269	247	269	0.97
4	14	0.00076	0.041	14.5	0.7	1	23	274	296	274	296	0.99
5	14	0.00014	0.0077	16.8	1.0	3	23	303	323	301	323	0.98
6	14	0.077	4.2	8.2	2.0	1	23	365	387	365	387	0.98
7	14	7.5e-05	0.004	17.7	0.4	1	23	483	506	483	506	0.98
8	14	0.051	2.7	8.7	0.3	1	23	780	802	780	802	0.97
9	14	0.0044	0.23	12.1	0.4	1	23	840	862	840	862	0.96
10	14	0.0018	0.097	13.3	1.5	1	23	868	890	868	890	0.97
11	14	3.8e-05	0.002	18.6	0.5	2	23	897	918	896	918	0.96
12	14	2e-05	0.0011	19.5	3.1	1	23	924	946	924	946	0.98
13	14	0.0026	0.14	12.8	2.0	1	23	952	974	952	974	0.97
14	14	0.00036	0.02	15.5	3.1	1	23	980	1003	980	1003	0.96

Sequence Information

Coding Sequence: atgcaatccattttaaagaaaagagttgaaacaaatataaaatgttatgtttGTGACGGTGCACTCAATGAAGAGAAATGTCTACTTCTTGATTCGGTTACTCCATATTCAAAAACCTCAATACCAAATAAAATCGGACAGTTATTAGGAGATCAATATGTCATATTGGTTTCACCTGAAGACAGTATATGTAAATCATGCtatgatttatttaaacttCTTGATGAACTAGAAACTCGAACACAGAAtgttaaaaatgatattataaatcatttgaCTGTTAAATATCATGTTATCAGTGATGATACTCAATCAGATGCTTGCGCTGTAAAAATAGAAACATTGCCCAGTGCTTCTAAATCTTTGAAACGGAAAATAGATAGTTCAGGTGAATTATTAAACCATGAAGAAATCGAACAGCAGCTTTCACAAATGTTTGGTTCACCTATAAAAATTACTTCTGTTGACCGTAGCAAAAAAAGGATACAAAActataaatgcatttattgcAAATATCAATCAAACATTATTGCTGAATATAAGAAACATATAGGCAAATGTAAAagaacaaatatattaaaatgttctGAATGTAATGTCATTTTTAATGAACATGTCTTATACAGAAGACACATGAAGGAAGTTCACTACAGTCGTTATAAATGTTTGAAATGTGATCTTAGTTTTAACAGTGAAGCCGTTTTGAAAAACCACTTGTCTCAAAATATTTGTGATGTGTTAGTTTGTAAAATATGTCAATTTCAAGCAAGGACTAAAGAACAGTATATGGAGCATATAAAGACCCACAGTAGACCAATGTTTAAATGTGGGGTATGCTATCAAAGATTTGAATCGAAAGCTGTTTTAAATAATCATGTTAAAACACATCGTTCTACATCGTTTTGGTGTGGGATATGTAGAAAATCATTTAATCAACGTGATACGCTTATGTTACATTTGAAAAGTCATACAAATACGCGAGGTACCGACATAAAAAGATCTTCAAACTCTATGTCTCAAATCGAAAACAGTCTTGAAATAGATAATGACAAAACAAATAATGTCAAAAATGAATCTAAACAAATAGAATTTTTCACATGTAACAATTgtcaattaacatttttaaatgaattaacaTATCTGCAGCATATGAAAACACataatatgaaaaatgaaaaaccaTTCAAGGAAGAAAAAATTGAATCAAACAATAGTATCGATTTGGAAAGTATAATTGAAAAATTGCATTCAGATTATGAGGAAGTCCAAAAGAATGATACATCTGTGGATGAGACTCAGATTTCTGAAAAACCATTAGAAAATGACACAGAAATGCAACATGATAGTTATAGCAACTCCAATGAATCACAACAAATAGAGAATAAAGTATTATTAGAGAACATTTCAAATGCAAAAGATATATTAGAAAatggaaatattttagtttataaatgTAGTACATGtgaaaaaatttatgaaaatagtaATGATTTACAAATTCATTTATTAACCGATCATAATAATATTGACTCCGAAATTGAAATTTACCAAATACAAAGAAATATCAACGATGCAAATGGATTAAGTGTAAACGATCCAGATAAATCATCAAATATTGAAATGTCTAATTCTGAAGGTACTGTTGACGGTAActcttatattttatcaaaccaCGACAACATGAATGGTGACAACTTTGAAAACATTGCGTACATCAACTCAAATGACAATGAAAATGTCAAATACGTAACTATTAATGCAGCTAACGGAGATGAGTCTCATATTTTGACATCTGACGATAAAGAAATCCAAGTATTGGCATACGACCCTAAAATGACTGACGACTTAGGTCAAAGTATTTTTGTCGATTCAGAAGGTGGTAAAATTCAATTTGTTATTATAGATTCAGAAATGCAAAATATGATTACTTCAAATGAAAATGCAGATGAtgttaattgtaataataaaattcctGAACAATCGCAAGATTTTTCAAATAACCAAAATTCAGATAATTCcgttataaatgaatttttgcaAAATGCTATAACCACCAATGATATTGCATTAGAACAATCTGAATATTTATTTCACGACGGaagtaaagtaaaaataattgataataaaaaaattgaaccaTCACAACAGATTATTGAAAATTCAAAGAATAGTACAGAAAATCACGATTTCAATTTAGAGGATATTTGTGATATAAAGACCGAATCAAATAACCAGATTAGAGATAAAAATGAATTAGATACAAACACAGAAAATAATGAACctgaaataaacaatgaaaaaaagaataatgaaaaacaagtaaataaaagaaaattatttatatgtggCAAATGtggatttaaaagtattaattatgATGAAATTAATTCTCACGTAAATACCCATAACGAATCTGGTCTTGTTAATAAATCTCACAGTCCtaaatcaaatcaaaaaaatgtacaaactaAACCAAAGAAAACCGTTTCAAAGTCTATAAAAAATTCTTCGACAAATTTTACTTGCAATGCTTGCGGtcgattatttaaaacaaaaactggTTTGATGTACCACGAAGCAGTACATACAGGCAAATACAATTTCTTCTGTAAGTTCTGTAATAAAGGATTTATGTCCAAAGCGCAAATGTTAGAGCATCAGAATGTTCACAGTGAAGAGGAAAGAGTCGTATGTGACATTTGTGGGAAAAAATTTaagtttCAGAGTACATATTGGATTCATCGTAAATGGCATAACAATCCGTACCCTTACTCATGCGAATATTGTGGCCGCAAATTCCAACACAGCTCTCTCCTTGCTGTTCACAAAAGAAAACATACAGGAGAACGTCCCTATCAATGTATACATTGTAAAGTCACATTTACCGTAAGCGGTACATTGAAACGTCACTTAATGTTACACACGGGTGCTTACCCTTTCAAGTGTAATGAATGTTCAAGAAGTTTCACTACACGACATAAATATGCAGACCATTTAGCTAAAGTACATAAAGATGATTCATTATTGAAAAGTATAtcattaaataaagtaaaagattataaaatggTTATAAAAAATGCAGATACTGATGATAAAAGTAGTGTTAAGAAGGTATACGATTTTGCAAGTttaacaaatgaaataaaatatgaaatggtTGTCAAATCAAAAGAAAGTGATGAAGatacttttattttgaataacgCAAATATGCAAGAAGTTATTGTAGATGGTTGCAATTATATTGAAGATgaaaataatatgattattcTGAATGATAATTCTGAAACAAACggaaattgtaaaaacgaaGTTAAATTGGAGAATCAGAATGCAGGGATTTTTTTATCAGATGAAACTAGTAAATGTTATGAAGTACAAGTGTCTAATTCTAATAATCAACATTTGTGGACGGCGATAAACAATATTGTGCatgatgaaaatattaataatggtactgtatatcaaaaaaatttgattgtTCCTTCAGAGAATGTTGTTGAGATTGTTCTTGGTGATACgaatataaatttagataataattcacatttgttaaataattggtaa
Protein Sequence: MQSILKKRVETNIKCYVCDGALNEEKCLLLDSVTPYSKTSIPNKIGQLLGDQYVILVSPEDSICKSCYDLFKLLDELETRTQNVKNDIINHLTVKYHVISDDTQSDACAVKIETLPSASKSLKRKIDSSGELLNHEEIEQQLSQMFGSPIKITSVDRSKKRIQNYKCIYCKYQSNIIAEYKKHIGKCKRTNILKCSECNVIFNEHVLYRRHMKEVHYSRYKCLKCDLSFNSEAVLKNHLSQNICDVLVCKICQFQARTKEQYMEHIKTHSRPMFKCGVCYQRFESKAVLNNHVKTHRSTSFWCGICRKSFNQRDTLMLHLKSHTNTRGTDIKRSSNSMSQIENSLEIDNDKTNNVKNESKQIEFFTCNNCQLTFLNELTYLQHMKTHNMKNEKPFKEEKIESNNSIDLESIIEKLHSDYEEVQKNDTSVDETQISEKPLENDTEMQHDSYSNSNESQQIENKVLLENISNAKDILENGNILVYKCSTCEKIYENSNDLQIHLLTDHNNIDSEIEIYQIQRNINDANGLSVNDPDKSSNIEMSNSEGTVDGNSYILSNHDNMNGDNFENIAYINSNDNENVKYVTINAANGDESHILTSDDKEIQVLAYDPKMTDDLGQSIFVDSEGGKIQFVIIDSEMQNMITSNENADDVNCNNKIPEQSQDFSNNQNSDNSVINEFLQNAITTNDIALEQSEYLFHDGSKVKIIDNKKIEPSQQIIENSKNSTENHDFNLEDICDIKTESNNQIRDKNELDTNTENNEPEINNEKKNNEKQVNKRKLFICGKCGFKSINYDEINSHVNTHNESGLVNKSHSPKSNQKNVQTKPKKTVSKSIKNSSTNFTCNACGRLFKTKTGLMYHEAVHTGKYNFFCKFCNKGFMSKAQMLEHQNVHSEEERVVCDICGKKFKFQSTYWIHRKWHNNPYPYSCEYCGRKFQHSSLLAVHKRKHTGERPYQCIHCKVTFTVSGTLKRHLMLHTGAYPFKCNECSRSFTTRHKYADHLAKVHKDDSLLKSISLNKVKDYKMVIKNADTDDKSSVKKVYDFASLTNEIKYEMVVKSKESDEDTFILNNANMQEVIVDGCNYIEDENNMIILNDNSETNGNCKNEVKLENQNAGIFLSDETSKCYEVQVSNSNNQHLWTAINNIVHDENINNGTVYQKNLIVPSENVVEIVLGDTNINLDNNSHLLNNW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344290;
90% Identity: iTF_01344290;
80% Identity: -