Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540816.1:18918549-18920686[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.15 8.3 7.2 2.5 1 19 188 206 188 211 0.81

2 10 0.0017 0.09 13.4 0.9 1 23 217 240 217 240 0.97

3 10 2.4e-06 0.00013 22.4 0.5 3 23 248 268 246 268 0.96

4 10 3e-08 1.6e-06 28.4 2.6 1 23 274 296 274 296 0.98

5 10 1.6e-05 0.00088 19.7 0.1 1 23 302 324 302 324 0.97

6 10 0.00016 0.0086 16.6 5.1 1 23 330 352 330 352 0.97

7 10 9.8e-07 5.3e-05 23.6 0.2 1 23 458 480 458 480 0.97

8 10 8.4e-05 0.0045 17.5 1.0 1 23 486 508 486 508 0.98

9 10 8.2e-07 4.4e-05 23.8 1.3 1 23 514 536 514 536 0.98

10 10 3.5e-06 0.00019 21.8 1.4 2 23 543 564 542 564 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.15	8.3	7.2	2.5	1	19	188	206	188	211	0.81
2	10	0.0017	0.09	13.4	0.9	1	23	217	240	217	240	0.97
3	10	2.4e-06	0.00013	22.4	0.5	3	23	248	268	246	268	0.96
4	10	3e-08	1.6e-06	28.4	2.6	1	23	274	296	274	296	0.98
5	10	1.6e-05	0.00088	19.7	0.1	1	23	302	324	302	324	0.97
6	10	0.00016	0.0086	16.6	5.1	1	23	330	352	330	352	0.97
7	10	9.8e-07	5.3e-05	23.6	0.2	1	23	458	480	458	480	0.97
8	10	8.4e-05	0.0045	17.5	1.0	1	23	486	508	486	508	0.98
9	10	8.2e-07	4.4e-05	23.8	1.3	1	23	514	536	514	536	0.98
10	10	3.5e-06	0.00019	21.8	1.4	2	23	543	564	542	564	0.96

Sequence Information

Coding Sequence: ATGGAACTTGACAACACAAATTGGTTAAAAAGCTGTGAGTCTATGTGTAGATTGTGTTTGGAGAGAAACGGTTTCCTTCTCGCCATTTTCGATAAAAATACATCGTATACAGAACATCAAAGAGGAGGGTCGCGTTTAAACAGTATTTACAAGAAAATTACTGAATTAGTTAACTTGGAGTTCGATTCTGACGATTCGCTGCCTAAAGGTATTTGTCACCGTTGCCTATATAAAGTAGAATTGTGTTCAGAATTCAAACAGCAATGTCTTCAATCAGAAGCTACATTACGTCAAGTAACTTCAAATGTCAGACAAAACTCAACAGACAAATTAGATAGTCAATTAAACATAACTAAAATAGTAGATAATGACCAATTTGAACGGTTTTCGTTACAAAATCAAGATTTACAAATAGAAAACGTCGTAATGGTCGTAGATCCTAACCAAGAATATGAAACTGATGCTGAATCAGATCAGGAAGTTGAATTTGAGCCAGAAGCTGAACGCCACAGTGACATGGAAAATGAAAACGTAGCTGATTTAACAGAGTTAAAGAACGTGTTCATGTGTACATACTGCGACCGTGCTTTTGTAGATTATGATTCTTGTTATACTCATGAAACGGAAACCCATGATCCTGAGAGTCCTTACACTTGTCGTGACTGTGATATGGTATTTGCAGATCGGATGAACCACACAGCACACTTGAAATCTGTTCACAAGAATGACAAACCTTTCGGGTGTCCCGAATGTGAGCGCAGCTTTAGCCGCAGGTCAGATCTACGTAAGCACACTGTCGTACACACAGGAATCAAACCGTTCACTTGTACAATATGTTCCAAGTCGTTTTCAAGAAACACAAATTTGACAAAGCATTTGAGAATACATAGCGGACATAAACCATATGTGTGCGCACAGTGCCCTCGTACATTCATTTCTAAGGGCGATCTGACCCGCCACGGGTTGATCCATTCAGGTGTTAAGCCTTTTGCATGCAGTCATTGTGATCAGTGTTTCGGAAGGCGTGATAAATTGATCAGACACGAGAAAAGACATTTCCAACAAGATGGTGGAGATGTTCAAGATGATTTGCCATCAGAGTTGAGTCTTTTAAGACACCATTTGTTACACGGAGATGAATATCAATGTGATAGAGAGATTAAGGAAGAGATAATGGATAGTTGGGATACATCTGAAAATATGGTCATCAGTGTAGACCCTTTTAATGGCGGAGAACATCAAAATATGGAAGAGCATGAAGAAGAACATGATCAAGCTTACAGGCCTTATCCTGAGCATGTTACCGGGGATAGCGATTACCAAAGTAACGTTCCCATTACACCAAAACCTAAAAAACAATCGGCGAAGAACTTTGCATGTAATATGTGTCCCAAAAGGTTTACTAGTCCAGATACTTTGAGACTGCACATGGCCGTACATTCAGGATTAAGGCCTTTTGAGTGTAATTTGTGTCCAAAAACGTTCTTACGTAAAAGAGAACTTGATAGACACATTACGACACATACAGGAATGAAACCTTTTGAATGTTCAAGCTGTGATAAGAAATTTGGAAGGAAAGATAAGCTTGTTAGACATATGAGAGTGcatgatataaataaattgttgaaCTGTGAGTATTGTCCTGCAAGTTTCAGGAGAAAAGATGGATTGATGCATCATATGAAGTCGCATTTCCAGAAAGAAGAAATGTATCAAGAAAATCAAGCAGAACCGTACGTATATTCAGGAGAAAATAACTGTTGA
Protein Sequence: MELDNTNWLKSCESMCRLCLERNGFLLAIFDKNTSYTEHQRGGSRLNSIYKKITELVNLEFDSDDSLPKGICHRCLYKVELCSEFKQQCLQSEATLRQVTSNVRQNSTDKLDSQLNITKIVDNDQFERFSLQNQDLQIENVVMVVDPNQEYETDAESDQEVEFEPEAERHSDMENENVADLTELKNVFMCTYCDRAFVDYDSCYTHETETHDPESPYTCRDCDMVFADRMNHTAHLKSVHKNDKPFGCPECERSFSRRSDLRKHTVVHTGIKPFTCTICSKSFSRNTNLTKHLRIHSGHKPYVCAQCPRTFISKGDLTRHGLIHSGVKPFACSHCDQCFGRRDKLIRHEKRHFQQDGGDVQDDLPSELSLLRHHLLHGDEYQCDREIKEEIMDSWDTSENMVISVDPFNGGEHQNMEEHEEEHDQAYRPYPEHVTGDSDYQSNVPITPKPKKQSAKNFACNMCPKRFTSPDTLRLHMAVHSGLRPFECNLCPKTFLRKRELDRHITTHTGMKPFECSSCDKKFGRKDKLVRHMRVHDINKLLNCEYCPASFRRKDGLMHHMKSHFQKEEMYQENQAEPYVYSGENNC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344279;
90% Identity: iTF_01344279;
80% Identity: -