Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540815.1:21923286-21926963[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.38 21 6.0 0.4 2 23 219 241 219 241 0.93

2 14 1.1 61 4.5 0.1 6 23 249 266 246 266 0.94

3 14 2.4e-05 0.0013 19.2 5.3 1 23 272 294 272 294 0.98

4 14 0.0013 0.069 13.8 3.8 1 23 300 322 300 322 0.98

5 14 2.1e-05 0.0011 19.4 0.7 1 23 328 350 328 350 0.98

6 14 0.24 13 6.6 0.1 1 20 356 375 356 380 0.92

7 14 2e-05 0.0011 19.5 0.6 5 23 445 463 443 463 0.95

8 14 6.3e-06 0.00034 21.0 0.8 1 23 469 491 469 491 0.99

9 14 3e-05 0.0016 18.9 1.8 1 23 497 519 497 519 0.97

10 14 4.5e-05 0.0024 18.3 2.9 2 23 525 546 525 546 0.98

11 14 2.3e-06 0.00012 22.4 1.3 1 23 552 574 552 574 0.96

12 14 1.1e-07 5.9e-06 26.6 2.0 1 23 580 602 580 602 0.98

13 14 3e-05 0.0016 18.9 3.4 1 23 608 630 608 630 0.98

14 14 0.0032 0.17 12.5 0.2 1 23 638 661 638 661 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.38	21	6.0	0.4	2	23	219	241	219	241	0.93
2	14	1.1	61	4.5	0.1	6	23	249	266	246	266	0.94
3	14	2.4e-05	0.0013	19.2	5.3	1	23	272	294	272	294	0.98
4	14	0.0013	0.069	13.8	3.8	1	23	300	322	300	322	0.98
5	14	2.1e-05	0.0011	19.4	0.7	1	23	328	350	328	350	0.98
6	14	0.24	13	6.6	0.1	1	20	356	375	356	380	0.92
7	14	2e-05	0.0011	19.5	0.6	5	23	445	463	443	463	0.95
8	14	6.3e-06	0.00034	21.0	0.8	1	23	469	491	469	491	0.99
9	14	3e-05	0.0016	18.9	1.8	1	23	497	519	497	519	0.97
10	14	4.5e-05	0.0024	18.3	2.9	2	23	525	546	525	546	0.98
11	14	2.3e-06	0.00012	22.4	1.3	1	23	552	574	552	574	0.96
12	14	1.1e-07	5.9e-06	26.6	2.0	1	23	580	602	580	602	0.98
13	14	3e-05	0.0016	18.9	3.4	1	23	608	630	608	630	0.98
14	14	0.0032	0.17	12.5	0.2	1	23	638	661	638	661	0.95

Sequence Information

Coding Sequence: ATGGCTCTTGATAAAGTATGTAGAACATGTTTAGCAGAAACTGATAATCTTAAATCTGTCACAGAAAAACCTGCtttttactttgaaaatgacGTCGATGCGTTGACAAATATGCTGGAAATCTGCACGTCTCTTCAGGTTTTAATAGAAGACAATTTACCGAAGTTAATATGTTCAGTGTGTGAAGAGAGATTATGTAATGCATTTAATTTTCGACAGCAGGCCATTAAATCAGATGACACTTTAAGAAATTATTTAAATTTACAACAAAGTCTGCAGAATATAGAAGGAATCAAAGAAGAAATATCTGAAGAATTGTTTTCACTTAAACCAGAAGTCCTTGAAGCTATCGAACAGTCTGAAACCGAAGACTGTAATGAAGTGTACGTTTCTgacaattcaaaaattaaatatgacgATAATTCCAACAGCCATTCAGAAAGCGATCCCGATTTTGAAGTTAATAAAAAaaaaaCTGTCAAGAAGAAAAAAAGAGGGAGACCAAAGACGTTGAGAAAAAACTATATAGAACCAGATGAGTGCAAACAGAAATACATAAAAAGGGAACCAGTCAAAACACGAGCGACAAAGATCGATCCAGAGATTGTCAAACAAGCAATGATCGAGAGCAAGAAGAAACAGCAAGAGAAACGAGAATGCAGACTGTGCGGGTTCATCTCGTCAAATGCAAGGGGTCTCAGTCTTCACATATCACATATACATAAGGAAATGAAAAATCGCTGGTGTCCGCTATGTTACATAGAAGTGGATGATTTAAACCTACACAAGAAAACGCACAGCAGTGAACGATTACataaatgcacattttgcgaTAAAACATTTAGAGCACAGGGACACCTTACGGAGCATCTACGCAGTCACATGGGCGACAGACCGCACAAGTGTGACGTTTGTGAGAAAAGGTTTCTATCTGCGAGACATCTGCGCGTCCACACTCGCATACATACAGGGGAGAAGCCCTACCAGTGTGAAATATGTTCAAGGAGATTCACACAGAAGAATGCCCTGCAGGGTCATCGTGCTAGCCATACGGGGGAGAAACCCTACAAATGCCAGGTATGTGATGAAAGGTGGCCAAAATTCTCTTTATTAGCAAAACATCTTGTCGAATCTGGACACGCAAGTGAAATAGACCCAGATTTTCTTAAGACAGCAGAGTCTGCTGTTCTTAAACAACAGCAGAAAAACAAACCGCTTCTTACTGAAGTCAAAGCTGAAGAAAATAGTGAAGAagTGAAGTCAGAATATCCGATAGAAGCTAAATATATTGCGACAGTTGTTAAAGATCCTGTTGATAAAACGTTATGTATAGTATGTGGGAAAACATTcagCACTGCCAACAAGCTGCGGTTGCACATGCGCGTGCACACGGGAGAGACTCCGTATCGTTGCGAGTACTGTGACAAGAGATTCAGCACGCGAGGCCAGCAGGTTGTGCATGTTCGCGTCCACACGGGAGAGAAGCCCCACGTGTGTCACGTTTGCGGAAGGGGGTTTGCCCAGACTAGTGTCCTCAACACGCACATGAAGCTACACACCGGTCGCCCAGAGCAGTGTTCTGTTTGTTTCCAGAGGTTCTGCAGGCCTGCTGAGCTACGACTGCACATGCGAAAGCACAcagGTGAGAAACCCTACCTGTGCACGCTGTGTGGCCAGGCGTTCATCCAGTCGAGCCACCTGACAGAGCACCTGAAGACGCACAGTGACGAAAGACCGTACAAGTGCCCGCACTGCGACCGCGCGTTCAAGCAGAACTCGTCGTTGCGCTCGCACGTCCAGATACACACCGGCGAGAAGCCGTACATGTGTACGCAGTGCCCGTACGCGTGCCGCCAGTCGTACAGCCTGACGCAGCACATGCGGCAGCATGGAGGCGACGTCGACCGGCCGCACGAGTGCCTTGCGTGCGGCAAGAGGTACCCGAGCCTCGCCATGCTCAACGCGCACTCGCGCAGTGCACACCAAGCAGTGTACTGA
Protein Sequence: MALDKVCRTCLAETDNLKSVTEKPAFYFENDVDALTNMLEICTSLQVLIEDNLPKLICSVCEERLCNAFNFRQQAIKSDDTLRNYLNLQQSLQNIEGIKEEISEELFSLKPEVLEAIEQSETEDCNEVYVSDNSKIKYDDNSNSHSESDPDFEVNKKKTVKKKKRGRPKTLRKNYIEPDECKQKYIKREPVKTRATKIDPEIVKQAMIESKKKQQEKRECRLCGFISSNARGLSLHISHIHKEMKNRWCPLCYIEVDDLNLHKKTHSSERLHKCTFCDKTFRAQGHLTEHLRSHMGDRPHKCDVCEKRFLSARHLRVHTRIHTGEKPYQCEICSRRFTQKNALQGHRASHTGEKPYKCQVCDERWPKFSLLAKHLVESGHASEIDPDFLKTAESAVLKQQQKNKPLLTEVKAEENSEEVKSEYPIEAKYIATVVKDPVDKTLCIVCGKTFSTANKLRLHMRVHTGETPYRCEYCDKRFSTRGQQVVHVRVHTGEKPHVCHVCGRGFAQTSVLNTHMKLHTGRPEQCSVCFQRFCRPAELRLHMRKHTGEKPYLCTLCGQAFIQSSHLTEHLKTHSDERPYKCPHCDRAFKQNSSLRSHVQIHTGEKPYMCTQCPYACRQSYSLTQHMRQHGGDVDRPHECLACGKRYPSLAMLNAHSRSAHQAVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344242;
90% Identity: iTF_01344242;
80% Identity: -