Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540810.1:11406675-11416574[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00011 0.0057 17.2 1.0 1 23 158 180 158 180 0.98

2 29 0.00019 0.01 16.3 4.0 1 23 186 208 186 208 0.98

3 29 0.0004 0.022 15.4 4.2 1 23 214 236 214 236 0.98

4 29 0.00073 0.039 14.5 1.8 1 23 242 264 242 264 0.98

5 29 0.0013 0.068 13.8 4.3 2 23 271 292 270 292 0.97

6 29 0.00017 0.0092 16.5 4.7 1 23 298 320 298 320 0.98

7 29 9.1e-05 0.0049 17.4 2.0 1 23 326 348 326 348 0.98

8 29 0.025 1.4 9.7 1.8 1 23 354 376 354 376 0.98

9 29 0.0049 0.26 11.9 6.7 2 23 383 404 382 404 0.97

10 29 0.00046 0.025 15.2 3.8 1 23 410 432 410 432 0.98

11 29 0.0016 0.087 13.5 1.1 1 23 438 460 438 460 0.98

12 29 0.00012 0.0066 17.0 3.9 1 23 588 610 588 610 0.98

13 29 0.00088 0.047 14.3 5.0 1 23 616 638 616 638 0.98

14 29 0.0014 0.074 13.7 5.5 1 23 644 666 644 666 0.98

15 29 0.00016 0.0085 16.6 2.1 1 23 672 694 672 694 0.98

16 29 0.013 0.71 10.6 1.4 1 23 700 722 700 722 0.98

17 29 0.0021 0.11 13.1 7.9 1 23 728 750 728 750 0.98

18 29 0.019 1 10.1 5.1 1 23 756 778 756 778 0.98

19 29 0.00073 0.039 14.5 2.0 1 23 784 806 784 806 0.98

20 29 0.014 0.75 10.5 0.3 1 23 812 834 812 834 0.98

21 29 0.0019 0.1 13.2 1.1 1 23 840 862 840 862 0.98

22 29 0.00094 0.05 14.2 1.1 1 23 868 890 868 890 0.98

23 29 0.0025 0.13 12.9 2.6 1 23 896 918 896 918 0.98

24 29 0.00016 0.0084 16.6 2.5 1 23 924 946 924 946 0.98

25 29 0.00095 0.051 14.2 4.3 1 23 952 974 952 974 0.98

26 29 0.00037 0.02 15.5 1.0 1 23 980 1002 980 1002 0.98

27 29 0.00021 0.011 16.3 1.3 1 23 1008 1030 1008 1030 0.98

28 29 0.00024 0.013 16.1 1.5 1 23 1036 1058 1036 1058 0.98

29 29 0.0026 0.14 12.8 4.7 1 23 1064 1086 1064 1086 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00011	0.0057	17.2	1.0	1	23	158	180	158	180	0.98
2	29	0.00019	0.01	16.3	4.0	1	23	186	208	186	208	0.98
3	29	0.0004	0.022	15.4	4.2	1	23	214	236	214	236	0.98
4	29	0.00073	0.039	14.5	1.8	1	23	242	264	242	264	0.98
5	29	0.0013	0.068	13.8	4.3	2	23	271	292	270	292	0.97
6	29	0.00017	0.0092	16.5	4.7	1	23	298	320	298	320	0.98
7	29	9.1e-05	0.0049	17.4	2.0	1	23	326	348	326	348	0.98
8	29	0.025	1.4	9.7	1.8	1	23	354	376	354	376	0.98
9	29	0.0049	0.26	11.9	6.7	2	23	383	404	382	404	0.97
10	29	0.00046	0.025	15.2	3.8	1	23	410	432	410	432	0.98
11	29	0.0016	0.087	13.5	1.1	1	23	438	460	438	460	0.98
12	29	0.00012	0.0066	17.0	3.9	1	23	588	610	588	610	0.98
13	29	0.00088	0.047	14.3	5.0	1	23	616	638	616	638	0.98
14	29	0.0014	0.074	13.7	5.5	1	23	644	666	644	666	0.98
15	29	0.00016	0.0085	16.6	2.1	1	23	672	694	672	694	0.98
16	29	0.013	0.71	10.6	1.4	1	23	700	722	700	722	0.98
17	29	0.0021	0.11	13.1	7.9	1	23	728	750	728	750	0.98
18	29	0.019	1	10.1	5.1	1	23	756	778	756	778	0.98
19	29	0.00073	0.039	14.5	2.0	1	23	784	806	784	806	0.98
20	29	0.014	0.75	10.5	0.3	1	23	812	834	812	834	0.98
21	29	0.0019	0.1	13.2	1.1	1	23	840	862	840	862	0.98
22	29	0.00094	0.05	14.2	1.1	1	23	868	890	868	890	0.98
23	29	0.0025	0.13	12.9	2.6	1	23	896	918	896	918	0.98
24	29	0.00016	0.0084	16.6	2.5	1	23	924	946	924	946	0.98
25	29	0.00095	0.051	14.2	4.3	1	23	952	974	952	974	0.98
26	29	0.00037	0.02	15.5	1.0	1	23	980	1002	980	1002	0.98
27	29	0.00021	0.011	16.3	1.3	1	23	1008	1030	1008	1030	0.98
28	29	0.00024	0.013	16.1	1.5	1	23	1036	1058	1036	1058	0.98
29	29	0.0026	0.14	12.8	4.7	1	23	1064	1086	1064	1086	0.98

Sequence Information

Coding Sequence: ATGAAAATGATTCAAATAAAGGAAGAAATTGACGAAAGTGAAGATGTTGATATTCAAGATGATTTTGGAATAATGAAACAGgaaacattgtatattaaaaatgaaaatcatACTGATGATGAAGATACAAGACAAATACAAAGTCAATATCAAGATGAAATATCAAAAGAATATCAAGTAAATGGAATTAAAACAGAAATATTGTACATTAAGAGTGAAAATCTCACTGACGATGAAGACACAACCAGACAAATACAAAGTCAATATCAAAAAGAAATATCAGTTACCAAAAAACAGCAACATGAATGTAACAGTGAAAATACAAAAGAATATCAAGTAAATGGAATTAAAACAgaaaCATTGTATATCAAAAATGAAAATCTCACTGACAATGAAGACACGTGTGACTATAGCACAACCAGTAACAGTCTTTTAGAAATAAATCTGTTAAACCAGACTGATGAACTACCTTTCAAATGTGAACAGTGTGATTACAGTGCACGTAGAAAGGCTGAATTAAAACTACATCAGTTAAAACATACCGGTGAACTACCTTTCAAATGTGGACAGTGTGAATACAGCACAGGTAATAAGAGTCATTTAAAAAGACATCAGTTAAAACATTCCAGTGAATTATCCTTCAAATGTGACCTGTGTGAATACAGCACTTGTAGAAAGAGTGAATTAAAATTACATCAGTTAAAACATAGCAGCGATCGATCTTTCAAATGTGAACAGTGTGAATATAGCACAAATATAAagagtaatttaaaattacatcagtTAAAACATAGCAGCGATCGATCTCTCAAATGTGAACAGTGTGAATACAGTACATGTAGAAAGAGTAGTTTAAAATTGCATCAGTTAAAACATACCGGTGAActaccttttaaatgtgaacaTTGTGAATACAGCACAGCTagaacatataatttaaaaaaacatcaattaaaaCATACCGGTGAATTACCATTTAAATGTGAACAGTGTGAATACAGCTCACGTAGAAATAGtgatttaaaattacatcagtTGAAACATAGCGGTGAACTACCTTTCAAATGTGAACAGTGTGAATATAGCACAGGTATAAAGAGTAGTTTCAAATTACACCAGTTAAAACATAGCAGTGATCGATCTTTAAAATGTGAACATTGTGAATACAGCACATGTAGAAAGAGTAGTTTAAAATTACATCGGTTAAAACATACCGGTGAACTACCTTTCAAATGTGAACATTGTGAATACAGCACAGCTagaacatataatttaaaattacatcagtTAAAACATACTGGTGAACTACCTTTCAAATGCGATCAATGTGAATACAGCACGGgtttaaatagtaatttaaaattacatcagtTAAAACATTCCGGTGAACTACCTTTCAAATGTGAACAGTACACAACCAGACCAATACAAAAACAATATCAAGAAGAAATATCAAAAGAATATCAAGTAAATGGAATTAAAACAgaaatattatatattaaaagtgAAAATCTCACTGACGATGAAGACACAACCAGACAAATACAAAGTCATTATCAAGAAGAAATATCAGTTACCAAAAAGCAGCAACATGAATGTAACAGTGAAAATACAAAAGAATATCAAGTAAATGGAATTAAAACAgaaacattgtatattaaaaatgaaaatttcaccGATGATGAAGACACATGCGACTATAGCACAAACAGTAACAAtcttttaaaaagaaatttggTAAAACATACCGGTGAACTACTTTTCAAATGTGAACATTGTGAATACAGCACAGGGAATAAGAGTCTTTTAAAGAGACATCAGTTAAAACATACCAGTGATCGATCTTTCAAATGCGAACAATGTGAATATAGCACATGTAGAAAGAGTGATTTAAAATTACATCGATTAAAACATAGCAGCGATCAATCTTTCAAATGTGAACAGTGTGAATACAGCACATGTAGAAAGAGTAGTTTAAAATTACATCGATTAAAACATACCGGTGAACTACCTTTCAAATGTGAATATTGTGAATACAGCACAGCTagaacatataatttaaaattacatcaattAAAACATACTGGTGAACTACCTTTCAAATGTGAACAGTGTGAATATAGAACAGGTATAAAGAGTAGTTTAAAATTACATCAGTTAAAACATAGCAGCGATCGATCTTTCAAATGTGAACATTGTGAATACAGTACATGTAGGAAGAGTAGTTTAAAAATACATCAGTTTAAACATACCAGTGAACTACCTTTCAAATGTGAACATTGTAACTACAGCACAGCTAtaacacataatttaaaattacatcagtTAAAACATACCGGTGAACTACCTTTCAAATGTGAACAGTGTGAATACAGGACACGTAcagaaacaaatttaaatttacatcaGTTAAAACATACTGGTGAACTACCTTTCAAATGTGAACTGTGTGAATATAGCACAGGTCTAGAAgcgaatttaaaattacatcagtTAAAACATACCGGTGAACTACCTTTCAAATGTGAACAGTGTGAATACAGCTCAGGTACAGAAacgaatttaaaattacatcagtTAAAACATACTGGTGACCTGCCTTTCAAGTGTGAACAGTGTGAATACAGCACAGGTCGTAAGGGTcttttaaaattacatcagtTAAAGCATACCGGTGAACTACCTTTCAAATGTGAACAGTGTGAATACAGCGCACGTAGAAAGGCtgatttaaaattacatcattTAAAACATACCGGTGAACTACCTTTCAAATGTAAACAATGTGAATACAGCGCACGTAGAAAGAGtgatttaaaattacatcagtTAAAGCATGCTGGTGAATTACCTTTCAAATGTGAACAGTGTGAATACAGCACAAGTCGAAAGGGTCATTTAAAATTGCATAAGTTAAAACATACCGGTGAATTACCTTTCAAATGTGAACAGTGTGAATACAGCGCACGTAGAAAGGCTGAATTAAAATTACATCAGTTAAAACATACCGGTGAACTACCTTTCAAATGTGAACAGTGTGAATACAGCACAGGTCGAAAGAGtgacttaaaattacatcagATTAAACATTCTGGTGAACTACCTTTCAAATGCGAACAGTGTGAATACAAAGCACGTAGAAAGAgtgatttaaaattacatattttaaaacatactgGTCAActaccttttaaatgtgaacaTTGTGAATACAGCACAGCTAgaacatataattttaaattacatcagTTAAAACATACCGGTGAAGTAACTTTCAAATGTGAATAG
Protein Sequence: MKMIQIKEEIDESEDVDIQDDFGIMKQETLYIKNENHTDDEDTRQIQSQYQDEISKEYQVNGIKTEILYIKSENLTDDEDTTRQIQSQYQKEISVTKKQQHECNSENTKEYQVNGIKTETLYIKNENLTDNEDTCDYSTTSNSLLEINLLNQTDELPFKCEQCDYSARRKAELKLHQLKHTGELPFKCGQCEYSTGNKSHLKRHQLKHSSELSFKCDLCEYSTCRKSELKLHQLKHSSDRSFKCEQCEYSTNIKSNLKLHQLKHSSDRSLKCEQCEYSTCRKSSLKLHQLKHTGELPFKCEHCEYSTARTYNLKKHQLKHTGELPFKCEQCEYSSRRNSDLKLHQLKHSGELPFKCEQCEYSTGIKSSFKLHQLKHSSDRSLKCEHCEYSTCRKSSLKLHRLKHTGELPFKCEHCEYSTARTYNLKLHQLKHTGELPFKCDQCEYSTGLNSNLKLHQLKHSGELPFKCEQYTTRPIQKQYQEEISKEYQVNGIKTEILYIKSENLTDDEDTTRQIQSHYQEEISVTKKQQHECNSENTKEYQVNGIKTETLYIKNENFTDDEDTCDYSTNSNNLLKRNLVKHTGELLFKCEHCEYSTGNKSLLKRHQLKHTSDRSFKCEQCEYSTCRKSDLKLHRLKHSSDQSFKCEQCEYSTCRKSSLKLHRLKHTGELPFKCEYCEYSTARTYNLKLHQLKHTGELPFKCEQCEYRTGIKSSLKLHQLKHSSDRSFKCEHCEYSTCRKSSLKIHQFKHTSELPFKCEHCNYSTAITHNLKLHQLKHTGELPFKCEQCEYRTRTETNLNLHQLKHTGELPFKCELCEYSTGLEANLKLHQLKHTGELPFKCEQCEYSSGTETNLKLHQLKHTGDLPFKCEQCEYSTGRKGLLKLHQLKHTGELPFKCEQCEYSARRKADLKLHHLKHTGELPFKCKQCEYSARRKSDLKLHQLKHAGELPFKCEQCEYSTSRKGHLKLHKLKHTGELPFKCEQCEYSARRKAELKLHQLKHTGELPFKCEQCEYSTGRKSDLKLHQIKHSGELPFKCEQCEYKARRKSDLKLHILKHTGQLPFKCEHCEYSTARTYNFKLHQLKHTGEVTFKCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -