Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540817.1:22897844-22902712[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.034 1.8 9.3 3.7 2 23 18 40 17 40 0.95

2 26 0.00037 0.02 15.5 5.8 1 23 45 67 45 67 0.98

3 26 0.00089 0.048 14.3 3.6 1 23 76 98 76 98 0.98

4 26 1.6e-05 0.00088 19.7 1.3 1 23 101 123 101 123 0.97

5 26 0.00046 0.025 15.2 1.1 1 23 129 151 129 151 0.99

6 26 0.085 4.6 8.0 2.1 1 23 186 208 186 208 0.95

7 26 0.0063 0.34 11.6 1.0 2 23 214 235 213 235 0.96

8 26 0.074 4 8.2 0.2 1 14 242 255 242 258 0.89

9 26 0.00025 0.013 16.0 2.9 1 23 270 293 270 293 0.98

10 26 2.7e-07 1.4e-05 25.3 0.8 1 23 298 320 298 320 0.98

11 26 0.00016 0.0086 16.6 1.9 1 23 329 351 329 351 0.98

12 26 9.2e-06 0.00049 20.5 0.7 1 23 354 376 354 376 0.97

13 26 3.4e-06 0.00018 21.9 0.2 1 23 382 404 382 404 0.98

14 26 9.3e-07 5e-05 23.6 0.9 1 23 410 432 410 432 0.99

15 26 0.0099 0.53 11.0 1.9 2 23 480 501 479 501 0.96

16 26 2.6 1.4e+02 3.4 0.8 2 23 521 541 520 541 0.93

17 26 0.0088 0.47 11.1 5.4 3 23 564 584 562 584 0.94

18 26 2.6e-06 0.00014 22.3 5.3 1 23 590 612 590 612 0.98

19 26 0.23 12 6.7 0.1 1 13 619 631 619 634 0.88

20 26 0.00034 0.018 15.6 0.7 1 23 647 670 647 670 0.95

21 26 7.1e-06 0.00038 20.9 1.8 2 23 676 697 675 697 0.97

22 26 5.5e-05 0.003 18.1 0.8 3 23 708 728 708 728 0.99

23 26 8.6e-06 0.00046 20.6 1.0 1 23 731 753 731 753 0.97

24 26 0.0011 0.059 14.0 2.8 1 23 759 781 759 781 0.98

25 26 5.5e-07 2.9e-05 24.4 0.2 1 23 787 809 787 809 0.98

26 26 0.0055 0.3 11.8 3.7 1 23 815 838 815 838 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.034	1.8	9.3	3.7	2	23	18	40	17	40	0.95
2	26	0.00037	0.02	15.5	5.8	1	23	45	67	45	67	0.98
3	26	0.00089	0.048	14.3	3.6	1	23	76	98	76	98	0.98
4	26	1.6e-05	0.00088	19.7	1.3	1	23	101	123	101	123	0.97
5	26	0.00046	0.025	15.2	1.1	1	23	129	151	129	151	0.99
6	26	0.085	4.6	8.0	2.1	1	23	186	208	186	208	0.95
7	26	0.0063	0.34	11.6	1.0	2	23	214	235	213	235	0.96
8	26	0.074	4	8.2	0.2	1	14	242	255	242	258	0.89
9	26	0.00025	0.013	16.0	2.9	1	23	270	293	270	293	0.98
10	26	2.7e-07	1.4e-05	25.3	0.8	1	23	298	320	298	320	0.98
11	26	0.00016	0.0086	16.6	1.9	1	23	329	351	329	351	0.98
12	26	9.2e-06	0.00049	20.5	0.7	1	23	354	376	354	376	0.97
13	26	3.4e-06	0.00018	21.9	0.2	1	23	382	404	382	404	0.98
14	26	9.3e-07	5e-05	23.6	0.9	1	23	410	432	410	432	0.99
15	26	0.0099	0.53	11.0	1.9	2	23	480	501	479	501	0.96
16	26	2.6	1.4e+02	3.4	0.8	2	23	521	541	520	541	0.93
17	26	0.0088	0.47	11.1	5.4	3	23	564	584	562	584	0.94
18	26	2.6e-06	0.00014	22.3	5.3	1	23	590	612	590	612	0.98
19	26	0.23	12	6.7	0.1	1	13	619	631	619	634	0.88
20	26	0.00034	0.018	15.6	0.7	1	23	647	670	647	670	0.95
21	26	7.1e-06	0.00038	20.9	1.8	2	23	676	697	675	697	0.97
22	26	5.5e-05	0.003	18.1	0.8	3	23	708	728	708	728	0.99
23	26	8.6e-06	0.00046	20.6	1.0	1	23	731	753	731	753	0.97
24	26	0.0011	0.059	14.0	2.8	1	23	759	781	759	781	0.98
25	26	5.5e-07	2.9e-05	24.4	0.2	1	23	787	809	787	809	0.98
26	26	0.0055	0.3	11.8	3.7	1	23	815	838	815	838	0.96

Sequence Information

Coding Sequence: ATGTCTGGGATGAATTACTGTATTAAAACTCATCAAAACGACTTTAGATTAAAATGTCCATTTTGTAAAAAAGGGTTTCACAAGAAATGTCAAATGGAAGTCCACATCGACAGTATTCACAAAGAAATTAAACACAGGTGTAACATATGCTGTAAGAACTTTTCAACACTCGGTAACTTACAAACACATCAAAGAATGCATGAACCGAATTACAAACCTGTTACCTTCGAGTGCCCGATATGTAGTAAGATATGTTCAAGCAAGGCATACTACAAAACCCATTTCAAATCTCACGAAGGGTTCACGTGTGAGGTTTGTGGAAAAGTGTTCAAGTTTTTGAAAAGTTTAAAACagcattttttaattcatagcggacagagaccttttaaatgcaaagTTTGCGAGAAGGACTTTAACAGTAAGTCGATACTTGGTGTCCATCAAAAgacacattctaatgaaaaaTCGATAATAATTAAGAACGAAGAAACAACAGAAGAACATTCTGTAAGAGGCAAGCCTAAATTAAATGATTGTATTAAAGAAAACGGCAAATATCGTTGTGCCTTATGTAACGAAATATTCGTAACTAAACAACAATGGTATTACCACTACGACCACCACTTGTATATTAATCTAAACTGTGACATCTGTggtaaaataatgaaaaatagaaAGAGTATGGCTAACCATAAACGAAGACACGACCTCGACTCTAAAAAACATCCGTGTTCGATATGCGAGAAGACATTTGTATCAAAAACAAGCGCTCTGCATTGCGAAAAGACCCACATGAacgattttaaatataaatgtgaaCATTGCAATAAAGGGTTTCACCAGAAAGGCGTTATGAATGTACATATTAGAAGTGTCCACGATCCAAACGATTATCCCTGTGAGGAATGTAACAGGGTGTTTTCATCTGCAAAGTATTTAAGAAGGCATCGGCGTGTTCACCAACCAGATTACGTAATACCGGAATATACATGTGATATATGTAACAAGGTCTGCATTTCAAGTGCGCAGTTCAGTGCGCATAAGAAATCTCATGACGGGTTTGCCTGTGAAGTTTGCGGGAAGGTACTACGGTACCAAGCACATCTTAGGACTCATTTGCTTACCCATGCAGGAGAAAAACCTTTTGTCTGCGCGTTTTGCGATAAAGGCTTCAGTAATCAGTATGCCCTCGCTGTGCATCTGAGgtcacatactaatgaaaaaccgtATAAGTGTGAGATATGCGAAAAGAAGTTTAGCCAGCGCGGGTCTTTTATTGTACACGTCCGTACCCATACGGGGGAGAGACCGTATAAATGCTCTCTCTGTTCGAATGCGAGCCTTCTTTTGGAAATAAAACAAGAACCGAACGATGATTACGAAGCCACTTATAACGACCAACCGACTCGCGGATACATAAAAGTCAAGAACAAAATACAATGCGCCTTGTGCGACAAGACATTTGTCAAACTGTCCAGATGGCGGTCGCACTACCAACACCACGAGGCATATAAAGATGTCCCCGAGGGCTTATCTGCAATGAACAAGAACGGTAGGATCTACTGTAACTTGTGCAACAGAAAAATATACTACTCCAAATTCAAAGCCCACGTGGAATCGCACAGCACAGACGGAAAACTGAAATCCGATGAAAAAGATGAATTCTTTCTCGAAAACGGTCGCGTCTGCTGTAAACTGTGCGATAAGACATTCACAAAACCGTGCGATTGGAGGCGCCACTTTACCGTGCATTCGAAAGCGCGCCCGCACGAATGCACGCAGTGCGGAAAGTGCTTCAAGGTGAAGTCACAGCTGAAGACTCACGTCCGCGTCCACGacacagacagagagacattcGCGTGCTCGATATGTCACAAGCAGTTCGCGCGTTTGAACACGGCGCGTATGTGCGAGAGGAACCATACGGCTAAATTCAATTTCTCTTGTTCCGAATGCGGTAAAGGATTCCACTACCAGAGTCTTTTGGATATACACGTAGAAGTCAAACACAACCCCGTTAAACAAGAGTGCACGATATGCAAGAAGGTGTTCACGAATAAGATCAACTTCAATCGGCACAATCGAATTCACGATCCGAATTACGCAAAGTTAGAGTTAGGTTGTGAGATATGCGGTAAGGTTTACGATTCGCGCAAGACGTTTATTAGGCATTTGAAATCGCACGAAGGTTTCGCTTGCGATACGTGCGGTAAGATATTCCGGTACAGTCACGGGCTGAAGCTGCACATGTTGATACACAGGGGAGAGCGGCCGTTTAGCTGCGAGGTGTGCGGGAAGTGTTTCAACAAGAAGCAGATTATGATCGTTCACCGTAGGACGCACACGAACGAGAAACCGTACTCGTGCGACGTCTGCGGTAAACGGTTCACGCAGCGCAGCCCGCTCGTTATTCATATGCGCGGACACACGGGAGAGAGGCCGTACCACTGTCCTCTGTGCTCCGACTGTTTTGTCAGCAAGAATTATTTGCGGATTCATATGCAGAACTTGCACGACTGTCCGAATATCTAA
Protein Sequence: MSGMNYCIKTHQNDFRLKCPFCKKGFHKKCQMEVHIDSIHKEIKHRCNICCKNFSTLGNLQTHQRMHEPNYKPVTFECPICSKICSSKAYYKTHFKSHEGFTCEVCGKVFKFLKSLKQHFLIHSGQRPFKCKVCEKDFNSKSILGVHQKTHSNEKSIIIKNEETTEEHSVRGKPKLNDCIKENGKYRCALCNEIFVTKQQWYYHYDHHLYINLNCDICGKIMKNRKSMANHKRRHDLDSKKHPCSICEKTFVSKTSALHCEKTHMNDFKYKCEHCNKGFHQKGVMNVHIRSVHDPNDYPCEECNRVFSSAKYLRRHRRVHQPDYVIPEYTCDICNKVCISSAQFSAHKKSHDGFACEVCGKVLRYQAHLRTHLLTHAGEKPFVCAFCDKGFSNQYALAVHLRSHTNEKPYKCEICEKKFSQRGSFIVHVRTHTGERPYKCSLCSNASLLLEIKQEPNDDYEATYNDQPTRGYIKVKNKIQCALCDKTFVKLSRWRSHYQHHEAYKDVPEGLSAMNKNGRIYCNLCNRKIYYSKFKAHVESHSTDGKLKSDEKDEFFLENGRVCCKLCDKTFTKPCDWRRHFTVHSKARPHECTQCGKCFKVKSQLKTHVRVHDTDRETFACSICHKQFARLNTARMCERNHTAKFNFSCSECGKGFHYQSLLDIHVEVKHNPVKQECTICKKVFTNKINFNRHNRIHDPNYAKLELGCEICGKVYDSRKTFIRHLKSHEGFACDTCGKIFRYSHGLKLHMLIHRGERPFSCEVCGKCFNKKQIMIVHRRTHTNEKPYSCDVCGKRFTQRSPLVIHMRGHTGERPYHCPLCSDCFVSKNYLRIHMQNLHDCPNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -