Sful012616.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sialis fuliginosa
Gene Symbol
-
Assembly
GCA_961205875.1
Location
OY540817.1:20149144-20151592[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3e-05 0.0016 18.9 1.5 1 23 255 277 255 277 0.98
2 17 0.0015 0.08 13.6 0.9 1 23 283 305 283 305 0.98
3 17 6.3e-06 0.00034 21.0 0.6 1 23 311 333 311 333 0.98
4 17 1.2e-06 6.4e-05 23.3 2.5 1 23 339 361 339 361 0.99
5 17 9.9e-06 0.00053 20.4 0.1 1 23 367 389 367 389 0.98
6 17 0.0001 0.0054 17.2 2.6 1 23 395 417 395 417 0.98
7 17 3.5e-05 0.0019 18.7 0.5 1 23 423 445 423 445 0.98
8 17 5.6e-08 3e-06 27.5 2.6 1 23 451 473 451 473 0.98
9 17 9.5e-06 0.00051 20.5 2.6 1 23 479 501 479 501 0.98
10 17 3.3e-07 1.8e-05 25.1 0.6 1 23 529 551 529 551 0.97
11 17 1.7e-05 0.00094 19.6 0.1 1 23 557 579 557 579 0.99
12 17 1.3e-05 0.00068 20.1 1.2 1 23 585 607 585 607 0.98
13 17 1.5e-06 8.2e-05 23.0 0.5 1 23 613 635 613 635 0.98
14 17 5.6e-08 3e-06 27.5 1.3 1 23 641 663 641 663 0.99
15 17 4.1e-06 0.00022 21.6 1.0 1 23 669 691 669 691 0.99
16 17 0.013 0.72 10.6 5.7 1 23 697 719 697 719 0.96
17 17 1.7e-06 9.1e-05 22.8 1.9 1 23 725 747 725 747 0.98

Sequence Information

Coding Sequence
ATGACAGcattaaataacaaattcaacATACCTGTTCAAATAACTGTTATTTCTGATTGGCCTAAATGGAAAAGTGAATTTGAAGTACAGCGTATAATATCAGGGTTAAGAAATAAATCTGAAAAGTACCAAACTAAAATATTACTTTCTTGTATAGGAAAACATTCAAAGGAAATATTATCATCACTTAAACTTAGTTCTTGTAATAtgaaaaagtataaaaacaTTACTAGAAAATTAGATGAGCTATGTAGCagacataaaaatgtaataaatgaaCGGTACAACTTTTTCACCCGATTTCAAAAAGAAAACGAACCATATGATAACTATATTAAGTCATTATATGAATTAGCTTCTAGTTGCAGTTTTGGTTTGCTTCATGATGAAATGATAAGAGATCGATTAGTTTGTGGAATTCTCAACCAGTTAGAATCAAAAATGTTACGTAAAGATGAACACTTAACGTTAGAAAAAACTATTAGACATTTACTTAAATCTGATCAAATGTTTATAGATGAAGAAAATAATGTTCAAACAGAACCATTCGAAGAAATAAATGAATTGAGTAATTCTAACAGTAATACTGATgataatattgaaaatgaaaCAACACAAAATGAGGAACATAATAatacatgtaattatataaaaattgaaacagttgaaaataaaaaaaattgtgaaacgATAATTTTTCCTGAAGTTGATGTAAAACTAGAAGACATTGATAAAAACGTTATCAAAACAGAAGACAAACAGTTTGAATGTGAAGTATGCAACGAGATATTTCACAACAAAAATGATTTATCATTACACATGAAAACCCATTCTGAAGATCGGCCTTTCAAGTGTGAAAGTTGCGCTAGCAGTTTCTCATCACAAAGTACACTGATAACCCATTCCAAAATACACACGACAGTCCGTCCATACAGCTGTGGGATGTGCGAGAAAAAGTTTTCCCGTAAAGATTATTTGCTAATTCATGCTCGGATACACAGTGGAGATAAACCATTTAAATGTGACTTCTGCGGTAAAGCATTTACCTTCAAATCAaatatgattaaacataaaagAATCCATAGCGAAAGAAGGCCTTATGAATGTGGTGtttgtaaattaacattttcacaAAGTGCCGATTTAACATCACACATTTCTATACATAATACAATCCGACCCTTCAAATGCAAAACCTGCAATAAATCGTTTACATCCCAGAACATACTCACAACTCATGAACGTGTCCATTCAGGATTAAAACCTTTTGAATGTGAAGTGTGTAATAAGAACTTTTCTACACGGAGTATTCTGAtaaaccatttaaaaatacatagcgggGATCGTCCACACAAATGTGATGAATGTAATAAAACATTTGCAAGAAAGAGCTATTTGATTATTCATATGAGAATGCATCGTCAAGAAAAACCATACAATTGTGAATCCTGTGATAAGAAATTTTCATTCAAGTCAAATCTGTTGAAACATTCGAGGATACATTCAACAGAAAGGTCATTTAATTATCGTTCAACTGATAAACATGTGACAGCAACTCCTTCAGATGACACAGAAAAACGTACATTCATGTGCGAGATCTGCGCTAAATCATTTTCTACGAAATCAAACCTTCTCAAACACCTGTTGGTACACTCAGGCGAACGTCCCTACAAATGCAATGTCTGCGGCCAAGGCTTCCCGGTGAAGAACTACCTGCGCGTACACGCGAGGGTCCACAGTGGAGAACGGCCGTACATGTGCGAGGTCTGCGCCCGCACATTTGCGCTCAAAAGCAACTTATACAAGCACTACCGGACGCACAGCGACGATAGACCATTTAAATGCGACGTATGCGGTAGGGCATTTGCGAGGAAGAGCTATCTGGTGAATCATTCCAAGGTACATTTAGATGACCAACCATTCACGTGTCCTACCTGCGATAAAACGTTCGCCAAGCAAAGTTACCTGACAATCCACCTTCGCACCCATAGTGGGGAACGTCCATACAAGTGTGAAGTCTGCAACAAGCTGTTCTCTCTCAAGTCCAACTTGTCTAAGCACGCTCGAGTGCATAGTGGGGAACGGCCGCACGCCTGTGAAGTGTGCCATAAGACATTTGCGTTCAAATGTGTACTGCTGCAACACAGGAGGGTGCATACTGGGGAACGGCCGTTTAGATGTGACGTCTGCGATAAGACATACACGCAAAAGTCTAAATTAGTAAAACATTCGAGGGTGCATGTTAATGGTTTATCTGTTTAA
Protein Sequence
MTALNNKFNIPVQITVISDWPKWKSEFEVQRIISGLRNKSEKYQTKILLSCIGKHSKEILSSLKLSSCNMKKYKNITRKLDELCSRHKNVINERYNFFTRFQKENEPYDNYIKSLYELASSCSFGLLHDEMIRDRLVCGILNQLESKMLRKDEHLTLEKTIRHLLKSDQMFIDEENNVQTEPFEEINELSNSNSNTDDNIENETTQNEEHNNTCNYIKIETVENKKNCETIIFPEVDVKLEDIDKNVIKTEDKQFECEVCNEIFHNKNDLSLHMKTHSEDRPFKCESCASSFSSQSTLITHSKIHTTVRPYSCGMCEKKFSRKDYLLIHARIHSGDKPFKCDFCGKAFTFKSNMIKHKRIHSERRPYECGVCKLTFSQSADLTSHISIHNTIRPFKCKTCNKSFTSQNILTTHERVHSGLKPFECEVCNKNFSTRSILINHLKIHSGDRPHKCDECNKTFARKSYLIIHMRMHRQEKPYNCESCDKKFSFKSNLLKHSRIHSTERSFNYRSTDKHVTATPSDDTEKRTFMCEICAKSFSTKSNLLKHLLVHSGERPYKCNVCGQGFPVKNYLRVHARVHSGERPYMCEVCARTFALKSNLYKHYRTHSDDRPFKCDVCGRAFARKSYLVNHSKVHLDDQPFTCPTCDKTFAKQSYLTIHLRTHSGERPYKCEVCNKLFSLKSNLSKHARVHSGERPHACEVCHKTFAFKCVLLQHRRVHTGERPFRCDVCDKTYTQKSKLVKHSRVHVNGLSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01344205;
90% Identity
iTF_01344205;
80% Identity
-