Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540817.1:22903376-22910293[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0063 0.34 11.6 3.3 1 23 30 52 30 52 0.98

2 28 0.0013 0.071 13.7 1.4 1 23 58 81 58 81 0.90

3 28 0.00015 0.0083 16.7 0.8 1 23 88 110 88 110 0.97

4 28 0.0068 0.37 11.5 6.8 1 23 115 138 115 138 0.91

5 28 4e-05 0.0021 18.5 2.8 2 23 144 166 143 166 0.95

6 28 1.1e-05 0.00057 20.3 0.5 2 23 176 197 175 197 0.97

7 28 0.00023 0.012 16.1 0.0 1 23 200 222 200 222 0.97

8 28 2.5e-06 0.00013 22.3 3.3 2 23 229 250 228 250 0.97

9 28 2.7e-06 0.00015 22.2 1.5 1 23 256 278 256 278 0.98

10 28 0.00056 0.03 14.9 5.6 2 23 333 355 332 355 0.96

11 28 0.016 0.88 10.3 0.4 2 23 362 384 362 384 0.93

12 28 0.0014 0.073 13.7 2.6 2 23 392 413 392 413 0.98

13 28 0.27 14 6.5 1.3 1 23 419 442 419 442 0.93

14 28 0.033 1.8 9.3 1.8 1 23 448 470 448 470 0.97

15 28 0.031 1.7 9.4 3.1 1 23 480 502 480 502 0.96

16 28 3.4 1.8e+02 3.0 0.1 3 23 510 529 509 529 0.84

17 28 2.2e-05 0.0012 19.3 1.5 2 23 536 557 536 557 0.93

18 28 4.9e-06 0.00026 21.4 2.6 1 23 563 585 563 585 0.98

19 28 0.007 0.38 11.4 1.3 2 23 632 654 631 654 0.92

20 28 0.0068 0.36 11.5 6.0 1 23 660 683 660 683 0.96

21 28 6.3e-05 0.0034 17.9 1.7 1 23 688 710 688 710 0.99

22 28 0.0027 0.14 12.8 0.5 2 23 717 739 716 739 0.94

23 28 0.0011 0.061 13.9 3.3 1 23 745 767 745 767 0.98

24 28 2.1e-05 0.0011 19.4 1.3 1 23 776 798 776 798 0.98

25 28 0.0001 0.0056 17.2 1.7 1 23 805 827 805 827 0.98

26 28 6.9e-05 0.0037 17.8 1.8 1 23 833 855 833 855 0.98

27 28 4.6e-07 2.5e-05 24.6 1.4 1 23 861 883 861 883 0.97

28 28 0.00061 0.033 14.8 1.8 1 23 889 912 889 912 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0063	0.34	11.6	3.3	1	23	30	52	30	52	0.98
2	28	0.0013	0.071	13.7	1.4	1	23	58	81	58	81	0.90
3	28	0.00015	0.0083	16.7	0.8	1	23	88	110	88	110	0.97
4	28	0.0068	0.37	11.5	6.8	1	23	115	138	115	138	0.91
5	28	4e-05	0.0021	18.5	2.8	2	23	144	166	143	166	0.95
6	28	1.1e-05	0.00057	20.3	0.5	2	23	176	197	175	197	0.97
7	28	0.00023	0.012	16.1	0.0	1	23	200	222	200	222	0.97
8	28	2.5e-06	0.00013	22.3	3.3	2	23	229	250	228	250	0.97
9	28	2.7e-06	0.00015	22.2	1.5	1	23	256	278	256	278	0.98
10	28	0.00056	0.03	14.9	5.6	2	23	333	355	332	355	0.96
11	28	0.016	0.88	10.3	0.4	2	23	362	384	362	384	0.93
12	28	0.0014	0.073	13.7	2.6	2	23	392	413	392	413	0.98
13	28	0.27	14	6.5	1.3	1	23	419	442	419	442	0.93
14	28	0.033	1.8	9.3	1.8	1	23	448	470	448	470	0.97
15	28	0.031	1.7	9.4	3.1	1	23	480	502	480	502	0.96
16	28	3.4	1.8e+02	3.0	0.1	3	23	510	529	509	529	0.84
17	28	2.2e-05	0.0012	19.3	1.5	2	23	536	557	536	557	0.93
18	28	4.9e-06	0.00026	21.4	2.6	1	23	563	585	563	585	0.98
19	28	0.007	0.38	11.4	1.3	2	23	632	654	631	654	0.92
20	28	0.0068	0.36	11.5	6.0	1	23	660	683	660	683	0.96
21	28	6.3e-05	0.0034	17.9	1.7	1	23	688	710	688	710	0.99
22	28	0.0027	0.14	12.8	0.5	2	23	717	739	716	739	0.94
23	28	0.0011	0.061	13.9	3.3	1	23	745	767	745	767	0.98
24	28	2.1e-05	0.0011	19.4	1.3	1	23	776	798	776	798	0.98
25	28	0.0001	0.0056	17.2	1.7	1	23	805	827	805	827	0.98
26	28	6.9e-05	0.0037	17.8	1.8	1	23	833	855	833	855	0.98
27	28	4.6e-07	2.5e-05	24.6	1.4	1	23	861	883	861	883	0.97
28	28	0.00061	0.033	14.8	1.8	1	23	889	912	889	912	0.96

Sequence Information

Coding Sequence: atgtttaatacacgGACTAAATTAGAAGAAACTAAACGTAAGGATGTTGTAGAAGACGGCGACGGTTACGTTCTAAAATCAGACGGATATCATTGCAAAGGCTGTAAAGACACGTTCGAAGACAAACAGCAGTGGCAAGAACACTACCGCACGCACATGTTTAAAAAACGATACTACTGCTCCGACTGCAACATGTACTTCAAGTACAGTTGGGATCTGACGAAACACAACATTCTAACTCACGACTACAAACGAGAATTCTTCGAATGCGAAGTGTGTGGTAAAGGATACGGATCTAAAAAGACGTTAAGCAAACATAAAGAAAAACATGTTAAGAAAGGGTACAAGTGCAGTCATTGTTACGAGAGTTTTAGTAAGAAAACAGACTTGCAAACTCATAACGAAAACTGTCACGCTGGAGTCGAAACTTACTGTACGATTTGTAATAAATCGTATTCGACTaaattcaattttcaaacgcaCTACCGTGCGTTTCACGATACGAATTATATCGCTCCGGTTTTGACTTGTGTAGTTTGCGGGAAGAGTTACGGATCTAGGGGATATCTGAAGAAACATCTGCGAAGCCATGAAGGGTTCCCTTGTGATATATGCGGGAAGGTTCTGACGACCCGGCCGAGCTTAGATGACCACTTGCTGGTGCACAGTGGCACAAAGCCGGTCAGTTGCAGTGTCTGTGGCAAGTGTTTCAGTAAGAAGCGTACGCTGAATGTTCACATGCGGCAGCATACGGGCGAAAAGCCGTATCAGTGTTCTATATGCGGGAAGCGGTTTACCCAACGCACGAGTCTCGTTATACATAACCGGTATCATACCGGGGAAAGGCCATTATTACAATCACGTACGTTCTGTGTAAACGGTGAGTCATTAACAGTTAGTACAACAgcatacaataataaatcaCATCTGAGTCTGGGAAGAAATATAGTATCTTTATCAACAATTACAGAATTAAATTCtgaaaatttctataaaaaatgcaaaacaTGTAATAAAGTATTCAAAAAAGAACACACATGGAAACGACATATCCGTTTATTCCATTCAAAAACTATGCCCAATGAGTGCAATATATGCCAGgagaaattcaaatttataccTCAGTTGAAACTACATCTAGAGGAATTCCATAAAATCACTGATACCTATGCAAAGTGTTCGATTTGCAACGCTACGTTTAAAAACTACGAAAGGTTACTTAGGCATAAGAAGCGACATTTTAATATGTTCACGTATAAGTGCGTTGCTTGCAATAgaggtttttattataaaaaagaagtcgAACAGCATAATGAACGTTTTCATAACCAAACAAAGAAATTCGTCTGCAGTATCTGTaactgtttttatgtaagtaaaaTTGCACTCGATCAGCACAAATTAAAACACGAGAGTGGTTACACAGAAAATCCTAAGTATCATTGTGATATATGCGGGAAGAGATTCTTAGAACGCAGCTCCGTGTATCGGCATAAGAAACTTCACGAGAAACAAAACAAGGCGATGTGTGGGGTCTGTGGTAAAGAAGTGGCGAATGCGTTTTTGAAGGTGCATGAGTTGACGCATACCGAAGAGAAACCTGAACGGTGTGACGTTTGCGGGAAGCGGTTTAAATctaaacagaatttgaaaacgCACTCTGTCGTACATACTGGAGAGAAAAAACATCGTTGTACTATATGCGGGAAGTACTTTACACAGAGGTCTACTCTGGTGGTTCATGTTCGGTATCATACAGGGGATAAACCGTTTTCTTGTGATATTTGTGCGAGTAGATTTGTTACAAAGACTCGGTCACCGCTGACACAAATTACACATTTTATGTTGGAAAACAATACCCCAGTGAAAACTAATCCGAggtttaaaagtttaaattgtACTATTTGCAATAgagtatttaaaaatagagaAAGATACAGATATCATAGCTACACAGCTCACAAAACCGAGCGCCCTTTTAAATGTAAACTGTGCAGCAAAAGTTTCTTTCTATCGTTTCAATTGACTAAACACGTAAAGGAATGTCACACCGAACGAGAATTTAAATGTGACATGTGTCCTCTAGCATTTCCAAGAATATGTAACCTCAAACTGCACCAGAGAAGGCATTTGAAAGAATTCACCGTTTATTGCGATTACTGCTCTAAAGGTTTTTACCACAGTTCAGAAGTAACATTACATGTAGAAGTTAATCACAGTGATAAAAAGAAACACAAATGCGACAtatgttcaaaattattttcggCTAGTACGTATCTTCAGTTGCATAAAAGAACACACGAAGAGGGTTACGTAGCTAAATATTTCGAGTGCTCCTTTTGCGATAAGAAATACGAGAAGAAGAGCTTACTCGAGAAGCACGCTAGAGTGCATACGGGAGACACGCAGAAATACGTGTGCCATTTCTGCGGTAAAACCTTGACGAGCACGACCAGTCTGAGAGATCATCTCCTGATACACATCGGCGATAAGCCGTTCGAATGCGATCTTTGTGAAAAACGATTCAGTAAGAAAATGGTTCTGAAAATCCACCGTAGGACTCATACCGGAGAAAAACCGCACAAGTGTCCGTATTGTGACAAGTCGTTCTCGCAACAATCGCCGCTGACATTGCACGTTAGAGGGCATACCGGGGAAAGGCCGTACAGATGCCAGCTCTGCGATGAGGGTTTTGTCAGTAAACATCTGCTTGAAACTCATAAGACTAAAGAGCACTTGGTACTCAAAATTGATGTACCTGAGACAATATAA
Protein Sequence: MFNTRTKLEETKRKDVVEDGDGYVLKSDGYHCKGCKDTFEDKQQWQEHYRTHMFKKRYYCSDCNMYFKYSWDLTKHNILTHDYKREFFECEVCGKGYGSKKTLSKHKEKHVKKGYKCSHCYESFSKKTDLQTHNENCHAGVETYCTICNKSYSTKFNFQTHYRAFHDTNYIAPVLTCVVCGKSYGSRGYLKKHLRSHEGFPCDICGKVLTTRPSLDDHLLVHSGTKPVSCSVCGKCFSKKRTLNVHMRQHTGEKPYQCSICGKRFTQRTSLVIHNRYHTGERPLLQSRTFCVNGESLTVSTTAYNNKSHLSLGRNIVSLSTITELNSENFYKKCKTCNKVFKKEHTWKRHIRLFHSKTMPNECNICQEKFKFIPQLKLHLEEFHKITDTYAKCSICNATFKNYERLLRHKKRHFNMFTYKCVACNRGFYYKKEVEQHNERFHNQTKKFVCSICNCFYVSKIALDQHKLKHESGYTENPKYHCDICGKRFLERSSVYRHKKLHEKQNKAMCGVCGKEVANAFLKVHELTHTEEKPERCDVCGKRFKSKQNLKTHSVVHTGEKKHRCTICGKYFTQRSTLVVHVRYHTGDKPFSCDICASRFVTKTRSPLTQITHFMLENNTPVKTNPRFKSLNCTICNRVFKNRERYRYHSYTAHKTERPFKCKLCSKSFFLSFQLTKHVKECHTEREFKCDMCPLAFPRICNLKLHQRRHLKEFTVYCDYCSKGFYHSSEVTLHVEVNHSDKKKHKCDICSKLFSASTYLQLHKRTHEEGYVAKYFECSFCDKKYEKKSLLEKHARVHTGDTQKYVCHFCGKTLTSTTSLRDHLLIHIGDKPFECDLCEKRFSKKMVLKIHRRTHTGEKPHKCPYCDKSFSQQSPLTLHVRGHTGERPYRCQLCDEGFVSKHLLETHKTKEHLVLKIDVPETI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -