Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540817.1:22891026-22896154[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0011 0.061 13.9 0.9 1 23 38 60 38 60 0.98

2 26 0.00076 0.041 14.5 2.8 1 23 65 87 65 87 0.97

3 26 0.00036 0.019 15.5 1.0 1 23 93 116 93 116 0.95

4 26 0.00052 0.028 15.0 0.5 1 23 121 143 121 143 0.94

5 26 9.3e-06 0.0005 20.5 1.3 1 23 151 174 151 174 0.97

6 26 7.3e-06 0.00039 20.8 0.5 1 23 179 201 179 201 0.98

7 26 1.1e-06 6e-05 23.4 4.1 1 23 207 229 207 229 0.98

8 26 0.027 1.5 9.6 0.5 1 13 235 247 235 251 0.91

9 26 0.0007 0.038 14.6 1.7 1 23 311 333 311 333 0.98

10 26 2.7e-05 0.0015 19.0 1.5 1 23 339 361 339 361 0.98

11 26 0.0096 0.52 11.0 0.7 1 23 367 390 367 390 0.96

12 26 0.00039 0.021 15.4 4.5 1 23 395 417 395 417 0.98

13 26 5.4e-06 0.00029 21.2 1.0 1 23 427 449 427 449 0.98

14 26 2.2e-07 1.2e-05 25.6 0.4 1 23 455 477 455 477 0.99

15 26 7.7e-07 4.2e-05 23.9 0.5 2 23 484 505 483 505 0.97

16 26 4.7e-07 2.5e-05 24.6 2.2 1 23 511 533 511 533 0.99

17 26 9.1 4.9e+02 1.7 7.9 1 23 573 596 573 596 0.96

18 26 9.2e-06 0.0005 20.5 2.5 1 23 602 624 602 624 0.96

19 26 0.00011 0.0062 17.1 0.8 2 23 632 653 631 653 0.97

20 26 0.00015 0.0081 16.7 1.6 1 23 659 682 659 682 0.95

21 26 2.5e-06 0.00014 22.3 6.2 1 23 687 709 687 709 0.99

22 26 3.7e-05 0.002 18.6 2.4 2 23 719 740 718 740 0.95

23 26 2.9e-05 0.0015 19.0 0.1 1 23 743 765 743 765 0.97

24 26 0.00016 0.0085 16.6 0.5 3 23 773 793 771 793 0.96

25 26 6e-06 0.00033 21.1 0.1 3 23 801 821 799 821 0.97

26 26 0.095 5.1 7.9 6.5 1 23 827 850 827 850 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0011	0.061	13.9	0.9	1	23	38	60	38	60	0.98
2	26	0.00076	0.041	14.5	2.8	1	23	65	87	65	87	0.97
3	26	0.00036	0.019	15.5	1.0	1	23	93	116	93	116	0.95
4	26	0.00052	0.028	15.0	0.5	1	23	121	143	121	143	0.94
5	26	9.3e-06	0.0005	20.5	1.3	1	23	151	174	151	174	0.97
6	26	7.3e-06	0.00039	20.8	0.5	1	23	179	201	179	201	0.98
7	26	1.1e-06	6e-05	23.4	4.1	1	23	207	229	207	229	0.98
8	26	0.027	1.5	9.6	0.5	1	13	235	247	235	251	0.91
9	26	0.0007	0.038	14.6	1.7	1	23	311	333	311	333	0.98
10	26	2.7e-05	0.0015	19.0	1.5	1	23	339	361	339	361	0.98
11	26	0.0096	0.52	11.0	0.7	1	23	367	390	367	390	0.96
12	26	0.00039	0.021	15.4	4.5	1	23	395	417	395	417	0.98
13	26	5.4e-06	0.00029	21.2	1.0	1	23	427	449	427	449	0.98
14	26	2.2e-07	1.2e-05	25.6	0.4	1	23	455	477	455	477	0.99
15	26	7.7e-07	4.2e-05	23.9	0.5	2	23	484	505	483	505	0.97
16	26	4.7e-07	2.5e-05	24.6	2.2	1	23	511	533	511	533	0.99
17	26	9.1	4.9e+02	1.7	7.9	1	23	573	596	573	596	0.96
18	26	9.2e-06	0.0005	20.5	2.5	1	23	602	624	602	624	0.96
19	26	0.00011	0.0062	17.1	0.8	2	23	632	653	631	653	0.97
20	26	0.00015	0.0081	16.7	1.6	1	23	659	682	659	682	0.95
21	26	2.5e-06	0.00014	22.3	6.2	1	23	687	709	687	709	0.99
22	26	3.7e-05	0.002	18.6	2.4	2	23	719	740	718	740	0.95
23	26	2.9e-05	0.0015	19.0	0.1	1	23	743	765	743	765	0.97
24	26	0.00016	0.0085	16.6	0.5	3	23	773	793	771	793	0.96
25	26	6e-06	0.00033	21.1	0.1	3	23	801	821	799	821	0.97
26	26	0.095	5.1	7.9	6.5	1	23	827	850	827	850	0.98

Sequence Information

Coding Sequence: ATGGAAACTGCTAAAAACGATAAGACAGCTCACGAACAGGTCATACAACAATACAGGAAACAGTTTTTCGGTACAAAGGTATCACCGAATTATACAAAAACCGAAACAGGTTACAAGTGTTTAATTTGTAGTAAGGAGTTTCAAAAAAGCTCTATGATCAGAAACCACATAACAATCCACAAAACTAAAAGGTTTCAGTGCAGCGTTTGCCCTCAAAAGTTCCGTTTGAAACATCATTTAGAAATTCACGAAGCTTCCCACACTAACACTTACAAGTTTAAATGCAAATCTTGCAACAAGGGGTACAATACGAACACGTCACTAAAAGAACACGTCGCTGTAACCCACGAAGGTAAAAGATATATATGTGAAATATGCAAGAAACCGTTCAAAAGCAAGCCTTATTACACGGAACACAAAGCAGGGCATGTAGAAAAATGCATATCTGTTTACCCGTGTAATCTGTGCGAGAAGAAATTTGCAAAGAAATCAGGTCTGCGAAGGCATTTTAGGGTAAATCACGAAAATCAACTTTTTGTTTGTCACATATGCGGGAAGAATTTTAAAAGTAAAGAAGGTTATGATGCACATATATTGATTCATGATGGTAAAAAACCATTCCCTTGTGTACATTGTGGGAAGTGTTTTGTATCGAAGAAAAATCTGCGTACGCATGTTCGGGTTCATACGGGAGAAAGGCCTTTTGTTTGTTCGGTTTGTAATAAAAGGTTTACGCAACAAAGAGTTTTTATACAAGTAAAGAAAGAACAGTTAAGTAACTCGGACGATGAAACATTAAGAAAATGTTCAAAACGAaacaaacacaaaaataaaagtaaaacagAAAATATGAACAAAGTAAACGATGAAaacaaagataataaaaatataaccagAACTGAAATCGGATACGTAAAAACAGATGAAGGATACAAATGTAAGGCATGTGATAAAACCTTCAAAGAAAAATACGTCTGGAAAAAACACACGATTGTGCACGAAAACAAACGCGAATTTGAATGCGATATCTGCAATCAAAGGTTCAATACAAAAACAAACATGCTCGCCCACAGAAACAGACATTTGAATAATTTCAAATACACTTGCAACGTCTGCGGTAAAGGATATCTATTCAACTGCAGTCTACAAGAGCACATCGAAATCGAGCACAAAGGAAAAAGGTACACTTGCGAGATTTGCCACAAAGAATTCAAACAGAAAAAGTTCTGGACGATACACCAGACGAGACATAATCCCGAATACGTCGTGGAGAGATGTTTCAAATGCAGCATGTGTAACAAAGCGTACACATCGAGGGCGAACTTGAAGATACACGTGAACCAACATTACGGCTTGTTGAATTACACTTGTGAGATATGCGGGAAGAGTTTCGTTTCGACTGGTAACTTGAGATCACATAGAATAACACATAGCGGTTATAAACCGCTTGTTTGTGAAGTATGCTCGAAGCGGTTCGCCGATAAAGAGTCGCTGAAACTTCATATGAGGACGCACACGGGAGAAAAACCGTATCAGTGTACAGAGTGCGCTAAAAGGTTCACGCAGAGATCTACTTTGACGGTACATATGCGGTACCATACAGGAGAAAGGCCGAACATCATCACGGAGAACACAACAACACCACCACCCGCCGGATACGAATCGGAAAGCATCATCATCAAAGAAGAGGACATATTCACGTTGAAACACAACGGGTATAACTGCAACATATGCTGCAAGACATTCTTTCAGAGAGATCTGTGCAGACGCCACTACCTGCGAATGCACGTGGAAAACTCCGAACACAGATGCGAGGTATGCGGCAAGAGTTTTAAATACAAGTGGAACCTGATAACGCACAGCAAACTACACGATGCCAACCGTAAAAAACTTACGTGCAGTATTTGCAGCAAGCAATACGCGACACCTCAATCTCTCAAAATGCACCAGAACAGACATTTGAAAAGGTACGCTCACAAGTGCACTAGATGTGGTAAAGGATTCTACCAACGTGCTGAACTTAAACTGCATGAAGATACCGAACATAATGCAGTTAGGTATCAGTGTCATGTTTGTAAGAAGACGTTCTGCAGCAAAGGGTATCTGACTGTGCATCAGCGTGTTCACGATCCGAATTACATAGCTCCCGAACTCCACTGTGGTTTTTGCGGTAAAACGTACCGGTCGAGAGATCTGTTACGCAGGCATTTGAAAGCACACGAAGGTTTCGCTTGTGATGTTTGCGGTAAGACGCTCACGTCGCAGATCAGTCTGAAGAATCATCTGTTGATACACCGAGGTGAAAGACCGTTGGCTTGTGCCACATGCGGGAAGAGGTTCAATAAGCGTGCTATATTGAAGGTGCATATGAGGACGCATACTAACGAAAGGCCGTACGGTTGTGATATCTGCGGGAAGCGGTTTGCGCAGCGCAGTCCGTTGGTGATACACATGAGGTACCATACCGGGGAGAGGCCGTACAAGTGCCAGCATTGTGTCGATGCGTTTGTCAGTAACACCTGTCTGAAGGCCCATATTAAGAAATGCCATCAGTACTATAACCTGTGA
Protein Sequence: METAKNDKTAHEQVIQQYRKQFFGTKVSPNYTKTETGYKCLICSKEFQKSSMIRNHITIHKTKRFQCSVCPQKFRLKHHLEIHEASHTNTYKFKCKSCNKGYNTNTSLKEHVAVTHEGKRYICEICKKPFKSKPYYTEHKAGHVEKCISVYPCNLCEKKFAKKSGLRRHFRVNHENQLFVCHICGKNFKSKEGYDAHILIHDGKKPFPCVHCGKCFVSKKNLRTHVRVHTGERPFVCSVCNKRFTQQRVFIQVKKEQLSNSDDETLRKCSKRNKHKNKSKTENMNKVNDENKDNKNITRTEIGYVKTDEGYKCKACDKTFKEKYVWKKHTIVHENKREFECDICNQRFNTKTNMLAHRNRHLNNFKYTCNVCGKGYLFNCSLQEHIEIEHKGKRYTCEICHKEFKQKKFWTIHQTRHNPEYVVERCFKCSMCNKAYTSRANLKIHVNQHYGLLNYTCEICGKSFVSTGNLRSHRITHSGYKPLVCEVCSKRFADKESLKLHMRTHTGEKPYQCTECAKRFTQRSTLTVHMRYHTGERPNIITENTTTPPPAGYESESIIIKEEDIFTLKHNGYNCNICCKTFFQRDLCRRHYLRMHVENSEHRCEVCGKSFKYKWNLITHSKLHDANRKKLTCSICSKQYATPQSLKMHQNRHLKRYAHKCTRCGKGFYQRAELKLHEDTEHNAVRYQCHVCKKTFCSKGYLTVHQRVHDPNYIAPELHCGFCGKTYRSRDLLRRHLKAHEGFACDVCGKTLTSQISLKNHLLIHRGERPLACATCGKRFNKRAILKVHMRTHTNERPYGCDICGKRFAQRSPLVIHMRYHTGERPYKCQHCVDAFVSNTCLKAHIKKCHQYYNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -