Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540810.1:16155844-16170881[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 0.00029 0.016 15.8 0.8 1 23 106 128 106 128 0.98

2 34 0.024 1.3 9.7 7.2 1 23 134 156 134 156 0.96

3 34 3.1e-05 0.0016 18.9 2.1 1 23 162 184 162 184 0.98

4 34 3.2e-05 0.0017 18.8 0.7 2 23 190 211 189 211 0.97

5 34 4.5e-05 0.0024 18.3 5.4 2 23 217 239 216 239 0.96

6 34 0.11 5.8 7.7 0.1 7 23 244 260 244 260 0.94

7 34 0.0016 0.086 13.5 1.1 1 23 266 288 266 288 0.97

8 34 0.0004 0.022 15.4 3.6 1 23 294 317 294 317 0.94

9 34 0.037 2 9.2 0.0 3 20 325 342 324 344 0.93

10 34 0.0052 0.28 11.8 1.6 1 23 420 443 420 443 0.95

11 34 0.0093 0.5 11.1 1.4 1 23 449 472 449 472 0.96

12 34 0.0073 0.39 11.4 0.4 1 19 478 496 478 499 0.95

13 34 0.00086 0.046 14.3 0.4 1 23 506 528 506 528 0.96

14 34 0.00012 0.0067 17.0 0.5 1 23 534 556 534 556 0.95

15 34 2.2e-05 0.0012 19.3 2.1 1 23 562 584 562 584 0.96

16 34 1.8e-06 9.7e-05 22.7 1.9 1 23 742 764 742 764 0.99

17 34 1.8e-05 0.00098 19.6 3.8 1 23 770 792 770 792 0.97

18 34 3.1e-06 0.00017 22.0 0.8 1 23 798 820 798 820 0.98

19 34 5.2e-06 0.00028 21.3 0.7 2 23 826 847 825 847 0.97

20 34 0.00084 0.045 14.3 2.5 1 23 853 875 853 875 0.97

21 34 0.0012 0.067 13.8 1.7 1 23 885 908 885 908 0.98

22 34 6.1e-06 0.00033 21.1 1.6 2 23 915 936 914 936 0.97

23 34 0.014 0.76 10.5 1.7 1 23 942 964 942 964 0.97

24 34 0.00043 0.023 15.3 3.4 1 23 970 993 970 993 0.95

25 34 0.00064 0.035 14.7 0.1 2 20 1000 1018 1000 1020 0.92

26 34 0.00013 0.0072 16.9 0.2 2 23 1038 1059 1037 1059 0.97

27 34 0.3 16 6.3 1.4 1 23 1065 1088 1065 1088 0.95

28 34 4.5e-05 0.0024 18.3 2.2 3 23 1096 1117 1094 1117 0.98

29 34 0.096 5.1 7.9 0.2 1 19 1123 1141 1123 1142 0.96

30 34 0.0028 0.15 12.7 0.6 1 23 1151 1173 1151 1173 0.96

31 34 0.00042 0.023 15.3 0.4 2 23 1180 1201 1179 1201 0.94

32 34 2.9e-05 0.0016 19.0 0.6 1 23 1207 1229 1207 1229 0.97

33 34 0.0013 0.068 13.8 7.2 1 23 1235 1257 1235 1257 0.97

34 34 0.00048 0.026 15.1 4.2 1 23 1263 1286 1263 1286 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	0.00029	0.016	15.8	0.8	1	23	106	128	106	128	0.98
2	34	0.024	1.3	9.7	7.2	1	23	134	156	134	156	0.96
3	34	3.1e-05	0.0016	18.9	2.1	1	23	162	184	162	184	0.98
4	34	3.2e-05	0.0017	18.8	0.7	2	23	190	211	189	211	0.97
5	34	4.5e-05	0.0024	18.3	5.4	2	23	217	239	216	239	0.96
6	34	0.11	5.8	7.7	0.1	7	23	244	260	244	260	0.94
7	34	0.0016	0.086	13.5	1.1	1	23	266	288	266	288	0.97
8	34	0.0004	0.022	15.4	3.6	1	23	294	317	294	317	0.94
9	34	0.037	2	9.2	0.0	3	20	325	342	324	344	0.93
10	34	0.0052	0.28	11.8	1.6	1	23	420	443	420	443	0.95
11	34	0.0093	0.5	11.1	1.4	1	23	449	472	449	472	0.96
12	34	0.0073	0.39	11.4	0.4	1	19	478	496	478	499	0.95
13	34	0.00086	0.046	14.3	0.4	1	23	506	528	506	528	0.96
14	34	0.00012	0.0067	17.0	0.5	1	23	534	556	534	556	0.95
15	34	2.2e-05	0.0012	19.3	2.1	1	23	562	584	562	584	0.96
16	34	1.8e-06	9.7e-05	22.7	1.9	1	23	742	764	742	764	0.99
17	34	1.8e-05	0.00098	19.6	3.8	1	23	770	792	770	792	0.97
18	34	3.1e-06	0.00017	22.0	0.8	1	23	798	820	798	820	0.98
19	34	5.2e-06	0.00028	21.3	0.7	2	23	826	847	825	847	0.97
20	34	0.00084	0.045	14.3	2.5	1	23	853	875	853	875	0.97
21	34	0.0012	0.067	13.8	1.7	1	23	885	908	885	908	0.98
22	34	6.1e-06	0.00033	21.1	1.6	2	23	915	936	914	936	0.97
23	34	0.014	0.76	10.5	1.7	1	23	942	964	942	964	0.97
24	34	0.00043	0.023	15.3	3.4	1	23	970	993	970	993	0.95
25	34	0.00064	0.035	14.7	0.1	2	20	1000	1018	1000	1020	0.92
26	34	0.00013	0.0072	16.9	0.2	2	23	1038	1059	1037	1059	0.97
27	34	0.3	16	6.3	1.4	1	23	1065	1088	1065	1088	0.95
28	34	4.5e-05	0.0024	18.3	2.2	3	23	1096	1117	1094	1117	0.98
29	34	0.096	5.1	7.9	0.2	1	19	1123	1141	1123	1142	0.96
30	34	0.0028	0.15	12.7	0.6	1	23	1151	1173	1151	1173	0.96
31	34	0.00042	0.023	15.3	0.4	2	23	1180	1201	1179	1201	0.94
32	34	2.9e-05	0.0016	19.0	0.6	1	23	1207	1229	1207	1229	0.97
33	34	0.0013	0.068	13.8	7.2	1	23	1235	1257	1235	1257	0.97
34	34	0.00048	0.026	15.1	4.2	1	23	1263	1286	1263	1286	0.94

Sequence Information

Coding Sequence: ATGGATGCAGTCGAGATTTCATTAAATACTATTCATTCAGTATGTATAGTATGTTTATCAAATAAAGAAAATGATTCACAATCCATTTATAATGTAATTACCATTGGTGTTCAAGTTTTAAATGTTGAGACGATTATAATGGAGTGTGCTTCTGTTGATGTATTAAAGATTTTAGAGAAATTAAAGGACCAGTCAGAATTAGAAAATGATAATACATACAAACCTCTATCTCTGTACGAACTTGACACTGAAAGGGACGATGATACATCCTATGAGGTTGAAAGTACCAAAAGTGAACCAAATCAaacgaaaaaatttaaatgtaatgtGTGTAGTAAGTCATTTATCAAAGATACAGAGCTGGAATTACATTGGAAGTCTCACACAGGAGCGAAAAGGCACATATGTACACATTGTAATAAAGAATTCATGACGTCTCATAGATTAAAAATTCATTCTCGGATACATTTAGgaGAACGGCCATTTTCTTGTGCCCAATGTAACAAACAATTCACAGTTAAAGGACATTTAGCTAGACATCTTCGGTTACATAGTGAATATTGTTTGAAATGTGAAATTTGCGGTGAATCATTTCAAAAACAAGACACGTTAAAAGTCCATAGTAAAACTCACAAAGCCAATACTTCTAGCTGTTCACATTGTAAAAAAGACTTCACAAGTTCACAACAATTGAAAAAACATATTCGACGATTCCATAGAAACATTAAAGGAGAAGAATTCAGCAAGCAAAAAGAACTGCAGATTCATTTAAAAACTCATACTGGTGCTCAAAGACACATTTGCGATAAATGCGGAATAGAATTTTTAAACCGATATAAACTACAAGTCCACATGATGTCACATATAGGTTTAAGACCACATGCGTGTACTCAGTGCGATAAGAAATTCAAAGAACGGAATAATTTGCGGCAGCACGAACGTTTGTACCACGGACTCGGAGACGGCGGTATCTGTCGAGGATGCAACATGACATTTGTGACGGCGAAGGCACTGGAAGAGCACAAGTCTATCTGTGCGGCTGACGGCACTTCACCGACTGAAGATGACaataataaagcatctgttAACGTTAACGAAGACAATAATTGTTGTAAATGCGCGTACTGCGGTAAAGATAATCGATTAACTGGTTGCAAGAGGTCATTAAGAATCAATGTTTGTTTCTTTTTAGATTTAGAATTCGATCGACCGGGACCGATGAGAATACACGAAAAAATTCATACAGGTGCTAGACGACATATTTGTGAGATATGTGGGTTGGagtgtattaataattataaactcACAGTGCATAAAATGAAAGCCCATACGGgAGAAAAACCATTCCAATGTGAGCAATGCGACAAACAGTTTCACGAGAAACCGCGTCTCCAGTACCACCTTCTCATAGCACACGGAATCGCTGAAGGTTACCAATGCACCAAGTGTAAGAAGTGGTTCAAGCGGCCAGAGTGGCTCGATCGTCATGCAGACAAGTGCAGCGGGTTGAAACCGCACGCGTGTCCGCACTGCCCGGTCAGATTTGACTCCGCGTTTGGATTAGAAATGCACGTACGGATACACACAGGAGACAGACCGTTTCTGTGCCGGGTGTGCGGTAAAGGGTTCAAACGGAAACAGCCGCTCATCGAGCACGAGAGGACGCACACGGGGGAGAGGCCACATGCGTGTGATCAGTGTGACAAAAGCTTCATGAGGAAAGCTGATCTGTTTACGCATCAGCGGGAACATACCGGCGTTTATCCTCATGTTTGTCATATGTCCATAATAATGGATATCATATCATTAGATTCAAATTCTGTGGATAAAGCGTGTAGAGTGTGTTTACTCGATAAAGGAAATAATGTTAGATCAATTTTTGAAGTAATTACTCTAGGCGTTCAGGATGTAAGcgttgataaaatattaatggaATGTGCTTCCGTTAAAGTAAAAGCAAAGGATGAATTTTCTAAACGTATTTGTGATATATGTTTTGTACAAGCGAAAATTGCGTACGAATTTcgacaaaaatgtaaaaaatccgAAGCGCTTCTTTCTGAATATAGAAAGAAAGAAAGCAAGTGTGGGCAAAGTGTAAAAGAAGAACTGGACTCAGATAGTGACAAATCTGATAATTTATCAGAAACGCAAGGCGATGATGACGATCGTTCTGATGATGATGACGATGACGATACCGATAAAACAATTGAtgaaaaacctttcaaatgcaATACTTGTGataaaaCATTCGAAAGAGAAATCCAGTTAACTGTACATCGTAGAACTCACACAGGCGTCAAACGGCACATTTGTAGTTATTGTAGTAAAGAGTTTGTTACGTCGCATCAGCTTCAGACACATATACGAATTCATACAGGAGAAAGACCGTTTTCTTGTGCGCAGTGTGACAAACAGTTTACAACAAAAGGAAACTTAGCAACGCATTTACGATTACACAGTGAATACAGACTCAAATGTGAAGTGTGCGGTGAGACATTCCAGCAACAAGATGCTTTAAAAACTCATAGAAAAACCCACAAAGGAGCCTTACAGCATATTTGTGAACACTGTGGTAAAGAATTCCTTGGCGCTTATCAGTTAAAGAAACACGTACGATCTCACACCAATAACGTGACAGATGAAAAATCATTCTCATGCTTCAAATGCAATGAAAAGTTCACGAAAGGAATTGAATTAATGAGGCACGTCCGAACGACTCATGGTGATGGAGATGCCCTTCAGTGCCATTTTTGCGGAGAAGTATTCAAAAAACGAGGCGAActtcaaatacatttaaaaacacACACCGGGGCAAAACGACACGTGTGTGACACTTGCGGAAAAGAGTTTTTAGACACTTACAAACTGACTGTTCACAAAATGTCTCATTTAGGTGAAAGACCGTTTGCGTGTTCACAATGCGACAGACGGTTCTCTGAACGCAGCAAACTGAGACATCACGAGCGTCTACAGCATGGAATGGGCGATGGGGGACGATGTAACGGATGCCGGAAGGTTTTTGCGACAGCTGAAGCATTAGAGCGACACGCATCTACGTGCTCGGGAGCTACAAACACGTCTGGTGCTCCCGATGATCCTGCTAACCTTAAATGTCCATATtgcgaTTTGGTATTTGAAAAACGAGGTATGTTGAAGATCCACGAGAAAGTACATACAGGTGCCAAGAGACATATTTGTGAAGCTTGCGGCAAGGAATGTATGGACACTTACAAATTAGCAGTTCACAAAATGAAAGCACACACAGGAGAACGTCCGTTCTGGTGTCCCGAGTGCGACAAGCGTTTCCACGAGCGCAGTCGTCTCCGTCAGCACATGAGGACCGCGCATGGGCTTGGCGACGGGTACCGCTGTAACAAGTGCAAGAAGTGGTTCGCGCGTGCTGAGTGGGTTGAGCGACACGAGCCGACATGTGGTGGCGCTAAGCCTCATGCGTGCTCGCACTGCCCGGCAAGGTTCGACAGTGCATTTGGGCTTGAAATGCACGTGCGCATTCACACAGGTGCGCGGCCTTTCCTGTGTCGCGCTTGTGGACGCGGGTTCGCCCGTAAGGAGACGCTCAACGAACACGAGAGAACGCACACCGGCGAGAGACCATTCTCGTGTACGCAGTGTGACAGGACCTTCATGAGGAAGGCAGAGCTCATAGCCCACAGACAGGAGCATACCGGTGTTTACAGACATGTCTGTCATATTTGCGGAAAGACGTTTAAATGTTCGAGTGGTTTGAGCCGACACAGAAGTACCCATTCTAAAGAACGGCCGTACGTATGCCGTGTTTGTTTTAAAACGTTTAGTCGGAGAGACGGACTCAGAAGACATTCAAACAACTGCCACCCGAAACAAGCTTGGCCCGATAACACGATTACCTATCAGAAGTAA
Protein Sequence: MDAVEISLNTIHSVCIVCLSNKENDSQSIYNVITIGVQVLNVETIIMECASVDVLKILEKLKDQSELENDNTYKPLSLYELDTERDDDTSYEVESTKSEPNQTKKFKCNVCSKSFIKDTELELHWKSHTGAKRHICTHCNKEFMTSHRLKIHSRIHLGERPFSCAQCNKQFTVKGHLARHLRLHSEYCLKCEICGESFQKQDTLKVHSKTHKANTSSCSHCKKDFTSSQQLKKHIRRFHRNIKGEEFSKQKELQIHLKTHTGAQRHICDKCGIEFLNRYKLQVHMMSHIGLRPHACTQCDKKFKERNNLRQHERLYHGLGDGGICRGCNMTFVTAKALEEHKSICAADGTSPTEDDNNKASVNVNEDNNCCKCAYCGKDNRLTGCKRSLRINVCFFLDLEFDRPGPMRIHEKIHTGARRHICEICGLECINNYKLTVHKMKAHTGEKPFQCEQCDKQFHEKPRLQYHLLIAHGIAEGYQCTKCKKWFKRPEWLDRHADKCSGLKPHACPHCPVRFDSAFGLEMHVRIHTGDRPFLCRVCGKGFKRKQPLIEHERTHTGERPHACDQCDKSFMRKADLFTHQREHTGVYPHVCHMSIIMDIISLDSNSVDKACRVCLLDKGNNVRSIFEVITLGVQDVSVDKILMECASVKVKAKDEFSKRICDICFVQAKIAYEFRQKCKKSEALLSEYRKKESKCGQSVKEELDSDSDKSDNLSETQGDDDDRSDDDDDDDTDKTIDEKPFKCNTCDKTFEREIQLTVHRRTHTGVKRHICSYCSKEFVTSHQLQTHIRIHTGERPFSCAQCDKQFTTKGNLATHLRLHSEYRLKCEVCGETFQQQDALKTHRKTHKGALQHICEHCGKEFLGAYQLKKHVRSHTNNVTDEKSFSCFKCNEKFTKGIELMRHVRTTHGDGDALQCHFCGEVFKKRGELQIHLKTHTGAKRHVCDTCGKEFLDTYKLTVHKMSHLGERPFACSQCDRRFSERSKLRHHERLQHGMGDGGRCNGCRKVFATAEALERHASTCSGATNTSGAPDDPANLKCPYCDLVFEKRGMLKIHEKVHTGAKRHICEACGKECMDTYKLAVHKMKAHTGERPFWCPECDKRFHERSRLRQHMRTAHGLGDGYRCNKCKKWFARAEWVERHEPTCGGAKPHACSHCPARFDSAFGLEMHVRIHTGARPFLCRACGRGFARKETLNEHERTHTGERPFSCTQCDRTFMRKAELIAHRQEHTGVYRHVCHICGKTFKCSSGLSRHRSTHSKERPYVCRVCFKTFSRRDGLRRHSNNCHPKQAWPDNTITYQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01344201;
90% Identity: iTF_01344201;
80% Identity: -