Basic Information

Insect: Sialis fuliginosa
Gene Symbol: -
Assembly: GCA_961205875.1
Location: OY540809.1:25073956-25081891[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00021 0.011 16.3 5.7 1 23 151 173 151 173 0.98

2 27 0.0061 0.33 11.6 1.8 1 23 179 201 179 201 0.98

3 27 3.6e-05 0.0019 18.7 1.1 1 23 207 229 207 229 0.99

4 27 7.3e-06 0.00039 20.8 3.2 1 23 235 257 235 258 0.96

5 27 0.021 1.1 10.0 1.7 3 23 268 288 266 289 0.94

6 27 0.00021 0.011 16.2 0.2 3 23 296 316 295 316 0.97

7 27 0.0074 0.4 11.4 2.0 2 23 445 467 444 467 0.96

8 27 0.0027 0.14 12.8 1.8 5 23 472 490 469 490 0.94

9 27 1.9e-06 0.0001 22.7 0.8 3 23 498 518 496 518 0.96

10 27 0.00029 0.016 15.8 0.4 1 23 524 547 524 547 0.98

11 27 0.00013 0.0068 16.9 4.8 1 23 553 575 553 575 0.98

12 27 2.8e-07 1.5e-05 25.3 0.4 1 23 580 602 580 602 0.98

13 27 2.2e-06 0.00012 22.5 4.4 1 23 608 630 608 630 0.97

14 27 4.7e-05 0.0025 18.3 0.4 1 23 636 658 636 658 0.98

15 27 3e-07 1.6e-05 25.2 3.2 1 23 664 686 664 686 0.99

16 27 1e-05 0.00054 20.4 0.1 1 23 692 714 692 714 0.98

17 27 0.011 0.59 10.8 0.1 1 17 720 736 720 737 0.93

18 27 0.00062 0.033 14.8 2.3 1 23 856 879 856 879 0.98

19 27 0.00012 0.0062 17.1 0.8 1 23 884 906 884 906 0.98

20 27 7.3e-08 3.9e-06 27.1 0.9 1 23 912 934 912 934 0.96

21 27 7.3e-06 0.00039 20.8 2.9 1 23 940 962 940 962 0.99

22 27 6.1e-06 0.00033 21.1 0.8 1 23 968 990 968 990 0.98

23 27 3.7e-05 0.002 18.6 0.3 1 23 999 1021 999 1021 0.98

24 27 4.9e-07 2.6e-05 24.5 0.8 2 23 1028 1049 1027 1049 0.96

25 27 0.00011 0.006 17.1 0.5 1 23 1055 1077 1055 1077 0.98

26 27 1.2e-05 0.00062 20.2 1.5 1 23 1083 1105 1083 1105 0.99

27 27 1.2e-06 6.7e-05 23.2 1.2 1 23 1111 1133 1111 1133 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00021	0.011	16.3	5.7	1	23	151	173	151	173	0.98
2	27	0.0061	0.33	11.6	1.8	1	23	179	201	179	201	0.98
3	27	3.6e-05	0.0019	18.7	1.1	1	23	207	229	207	229	0.99
4	27	7.3e-06	0.00039	20.8	3.2	1	23	235	257	235	258	0.96
5	27	0.021	1.1	10.0	1.7	3	23	268	288	266	289	0.94
6	27	0.00021	0.011	16.2	0.2	3	23	296	316	295	316	0.97
7	27	0.0074	0.4	11.4	2.0	2	23	445	467	444	467	0.96
8	27	0.0027	0.14	12.8	1.8	5	23	472	490	469	490	0.94
9	27	1.9e-06	0.0001	22.7	0.8	3	23	498	518	496	518	0.96
10	27	0.00029	0.016	15.8	0.4	1	23	524	547	524	547	0.98
11	27	0.00013	0.0068	16.9	4.8	1	23	553	575	553	575	0.98
12	27	2.8e-07	1.5e-05	25.3	0.4	1	23	580	602	580	602	0.98
13	27	2.2e-06	0.00012	22.5	4.4	1	23	608	630	608	630	0.97
14	27	4.7e-05	0.0025	18.3	0.4	1	23	636	658	636	658	0.98
15	27	3e-07	1.6e-05	25.2	3.2	1	23	664	686	664	686	0.99
16	27	1e-05	0.00054	20.4	0.1	1	23	692	714	692	714	0.98
17	27	0.011	0.59	10.8	0.1	1	17	720	736	720	737	0.93
18	27	0.00062	0.033	14.8	2.3	1	23	856	879	856	879	0.98
19	27	0.00012	0.0062	17.1	0.8	1	23	884	906	884	906	0.98
20	27	7.3e-08	3.9e-06	27.1	0.9	1	23	912	934	912	934	0.96
21	27	7.3e-06	0.00039	20.8	2.9	1	23	940	962	940	962	0.99
22	27	6.1e-06	0.00033	21.1	0.8	1	23	968	990	968	990	0.98
23	27	3.7e-05	0.002	18.6	0.3	1	23	999	1021	999	1021	0.98
24	27	4.9e-07	2.6e-05	24.5	0.8	2	23	1028	1049	1027	1049	0.96
25	27	0.00011	0.006	17.1	0.5	1	23	1055	1077	1055	1077	0.98
26	27	1.2e-05	0.00062	20.2	1.5	1	23	1083	1105	1083	1105	0.99
27	27	1.2e-06	6.7e-05	23.2	1.2	1	23	1111	1133	1111	1133	0.99

Sequence Information

Coding Sequence: atggaTAATACAGATAAAACATATTGGTCTTTTGAAAATATCTGCAGACTATGTTTATCCAGTGAAgaagaaacattaaaaatatttttaaatgatggTGATGAGAAGAATATACAAATTTCTGATTTATTGAAAGAATGTTGTCCATTTATTGAGatacaacaaaatgataattttccTTCTAACATTTGTATGATGTGTTTAACACAATTAAATCTACTTTATCGTTTTCAACAACGGTGTATTGCATCTGATACTAAATTACGCCAATATTCAATACAAAAGAACTCGTATGAATGGGTTTCACATTTTGCTGAATGTGCATCAGCAGAAAGTCTTAACAGTACTCAAACGCAATCTGAACAATCAAATGAAACAATTAACACTGATGATTATAAAACCCCTATAAAAACATCTGAAATACAATGCGAAGGCAAAGAGAACAAACAGTTCATGTGTAATATCTGTAGTCACTGTTTCCCGCGTAGAGAAACTTTGGTACGGCACAAAAGAACTCACACTGCTGAAAAACAGTATAACTGTACTGTTTGCCAAAAAAAACTAGCATCGGCAACTTCATTATCGcatcataaaaatattcatacagGCCAAAAACCTTTCCAGTGTAAATTTTGCAGTAAAGCTTATGGAGATCCAAGTTCTTTGCGCTTACATTTGAAACGCCACTTGAATCAACGTGATTACAAATGTTCGGAATGTAACTATTCTTTCTTTCGAAATTACGAACTAAAAAATCATATCATAATACATCATCGAACTAAGCCAGAAGAGAAATTTGGTTGTGGTTTTTGTAATAAAGAATTTAGTAACCCGATTTCTCAGCAGAGACATGAGAAGTTGCACCATttaaagaaaactaatatttgtgTGATATGTAATAGAGGTTATAGTTCTGAAGCAACTTTGAAACTACACATGAAAActcatgaaattaaaaattatcctgAACACGAAGAGAAAAAACCaaATATGATAATGGCATGTGCTTCCGTTACGATTCAAGAAGGAGATGGATTTCCCCAACAAGTTTGTGAAGaatgtattttgttattaaataaatcatacatATTTCGTCAGATTTGTCAACGGTCTGACCAGTTACTTcgtaaacaattaaatgataTTCCTTCAGATAAAGATTCCGAAGATGACAACAATTCTGAATTACACCAGGACTACTCAACTGATGAAAATACAGAATCGAAGGTTAATGAAAATtgtgatataataaataatcaaaaaataccACCAGCTACATTGACAGAAAACAAAGCAGAACAGCATGTTGAAAGTAATGAAAATTTAGATGTAGAATGTGAAAGATGTAATAGTAGGTTTTCTTCTATAAATAAtctaaataaacataaaaagaaaaatcataatataTGCATAGAATGTAATCGTCAATTTTCAAGTGCAAGCGCATTATGCAGACATTCTAagACACACACAAGAATCATTTCACACTTGTGTTCAGAATGTGGTAAAGGATTTATACGGTCCAGTGACTTGAACCAGCATGTACGAATACATACTGGAGAAAGACCTTACGTATGCCATCTATGTCCGAACAAGGCATTCACGCAAGCTGGCCAATTGAGGGAACATCTGAGAGCACACGAAGATAAGAAAGACTTTGTTTGTTCTACCTGCGGGAAGGCATTTTCACGCTTCAATACTTTGTGCCATCATGTCAAAATACATGCAGGAAAAATGTATATGTGTAATATTTGTGGGAAAAGTCTTTCAAGTACATCTTCATTAAAAGTCCACATGCGAATCCACACGAAAGAAAAACAGCACATTTGTCCTATATGCAACAAAGCCTTCACCCACCTGTCTCACTTAAAAGTGCACACTCGCGTCCACACAGGCGAACGTCCATTCATCTGTTCTGTCTGCTCAAAAGGATTCTCTGACGAATCCCGTTTACGTGTACACACCCGCATTCACTCTGGAGATAGACCGTACAAATGCACGATTTGTGACAGAAGCTGCGTCACATCCTCTATGCTCAAGAAACACATGAGAATTCACAGCGGGGAGAAGCCCTATGTCTGTTCTGTGTGCCCAAAGGCATATCCAAGATCAGAGGACTTGAGAGTGCATGAGAAAACCCATACAGGGAACAGAAACCACGTGTGTGGTGTGTGCGGTAAGGGGTTCTATCAAGCATCCACTCTCAAGCAACAAGAAGTGCCTCgagatataataaaacaattaaacgaTTTAGTTAGCTGTAATGATACGTACGATACGTATAACTACCAATACTTAGATCCAAAAGTAGAATTACAACATTATTCCAAAAACTCTCAAATAAATGAGAATGATGTTATATTAGAaccaaaaaatgaaacaattaaaaatattgcaatTGAAACTGACAAATGTGATAATGATATAAAGTATGATATCATTAGTAATCATTCAGAAGAAAATACACCTAGAATTACATGTGAAGAAAATAAAACTTACAGCTGTGACCAGTGTGattATGATGAACTGACCACGCACATGAAATCCCACCGCAACAAAACTCCCTACACGTGTACCACATGCTCTCAAACATTTTCTCAACTTCGAACCTACTTAGATCACCAACGTTCCGAACATGGAGAAcgcccttttaaatgcaacaTCTGCTCAAAGGCGTTCTTCTACCGTAGTGGTCTAGTATCTCATACACTCGTCCACAGTGGAGAAAAACATTACCTTTGCAACGAATGTGGTAAAAAATTCACTCGTAATGATGAGTTACGTAGACATGTTCGGATACATACGAAAGAGAGACCGTATGTTTGTAGAATATGTTCTCGAGGGTTCACACAGTCATTTCACTTGACCGAACACATGAGATCTCATGGGACTGAAAAGTTATTTGTATGTAGTACATGCGGTATGAAGTTTGCAAGGAATGGATCATGGAGGACTCATATGAAGACACATTTGGCGCCAAGTGCCAGGAAGGTTTACCCTTGCCAAGTTTGCAATAAATCGTTTATGTTAGCagGTACATTAAAAAAGCACATGACCATTCACACAGGAGAAAGACGTTGGATTTGTGAAATATGCGGCAAGCGATTTACACAATCAGCTCATTTAGAAATACACCGTAGAAGCCATACTGGCGTACGACCTTTTGTATGTGACACTTGTGGTCGAGGATTCTCTGCTTCGTCCAGACTTACGATACACAAGAGATCCCATACGGGTGAGAAACCATATCGCTGTACCTTGTGCCCACAAGCCTGCGCCACATCGACTGCGTTGAAGAAACATATAAGAACGCATACAGGCGAAGCTCCTTACCAATGTAATTTGTGTGAAAAAGCATTCAGAAGAAGGGATTTGTTAAAGTTACATCAAAAAGTACATGTAAAAAATCTTTTgtga
Protein Sequence: MDNTDKTYWSFENICRLCLSSEEETLKIFLNDGDEKNIQISDLLKECCPFIEIQQNDNFPSNICMMCLTQLNLLYRFQQRCIASDTKLRQYSIQKNSYEWVSHFAECASAESLNSTQTQSEQSNETINTDDYKTPIKTSEIQCEGKENKQFMCNICSHCFPRRETLVRHKRTHTAEKQYNCTVCQKKLASATSLSHHKNIHTGQKPFQCKFCSKAYGDPSSLRLHLKRHLNQRDYKCSECNYSFFRNYELKNHIIIHHRTKPEEKFGCGFCNKEFSNPISQQRHEKLHHLKKTNICVICNRGYSSEATLKLHMKTHEIKNYPEHEEKKPNMIMACASVTIQEGDGFPQQVCEECILLLNKSYIFRQICQRSDQLLRKQLNDIPSDKDSEDDNNSELHQDYSTDENTESKVNENCDIINNQKIPPATLTENKAEQHVESNENLDVECERCNSRFSSINNLNKHKKKNHNICIECNRQFSSASALCRHSKTHTRIISHLCSECGKGFIRSSDLNQHVRIHTGERPYVCHLCPNKAFTQAGQLREHLRAHEDKKDFVCSTCGKAFSRFNTLCHHVKIHAGKMYMCNICGKSLSSTSSLKVHMRIHTKEKQHICPICNKAFTHLSHLKVHTRVHTGERPFICSVCSKGFSDESRLRVHTRIHSGDRPYKCTICDRSCVTSSMLKKHMRIHSGEKPYVCSVCPKAYPRSEDLRVHEKTHTGNRNHVCGVCGKGFYQASTLKQQEVPRDIIKQLNDLVSCNDTYDTYNYQYLDPKVELQHYSKNSQINENDVILEPKNETIKNIAIETDKCDNDIKYDIISNHSEENTPRITCEENKTYSCDQCDYDELTTHMKSHRNKTPYTCTTCSQTFSQLRTYLDHQRSEHGERPFKCNICSKAFFYRSGLVSHTLVHSGEKHYLCNECGKKFTRNDELRRHVRIHTKERPYVCRICSRGFTQSFHLTEHMRSHGTEKLFVCSTCGMKFARNGSWRTHMKTHLAPSARKVYPCQVCNKSFMLAGTLKKHMTIHTGERRWICEICGKRFTQSAHLEIHRRSHTGVRPFVCDTCGRGFSASSRLTIHKRSHTGEKPYRCTLCPQACATSTALKKHIRTHTGEAPYQCNLCEKAFRRRDLLKLHQKVHVKNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -